IVF0010817 (gene) Melon (IVF77) v1

Overview
NameIVF0010817
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr06: 16994948 .. 16995229 (+)
RNA-Seq ExpressionIVF0010817
SyntenyIVF0010817
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAGTGGTTTATGGGTGAAACGATGTGGGAACGATTGCATCAGAATCATTCAGTAATAAAGATGCACGCACTGATCTTTCTCGAACTTTCGAGAATGAGGATGATGCCTCATTTGACCAGGAGTGTAGGTCCTAGCGACATTACACGCATCATGAAGAACATACATATTGCTCACCTACCACCAATTCTCGCTCTAAAAAATAAGACACACATCAATCTGATGGCTAACAATGGGATAGACTTACTCGGAAACCACGAGAGTCGATACATCATGTAG

mRNA sequence

ATGAAAGAGTGGTTTATGGGTGAAACGATGTGGGAACGATTGCATCAGAATCATTCAGTAATAAAGATGCACGCACTGATCTTTCTCGAACTTTCGAGAATGAGGATGATGCCTCATTTGACCAGGAGTGTAGGTCCTAGCGACATTACACGCATCATGAAGAACATACATATTGCTCACCTACCACCAATTCTCGCTCTAAAAAATAAGACACACATCAATCTGATGGCTAACAATGGGATAGACTTACTCGGAAACCACGAGAGTCGATACATCATGTAG

Coding sequence (CDS)

ATGAAAGAGTGGTTTATGGGTGAAACGATGTGGGAACGATTGCATCAGAATCATTCAGTAATAAAGATGCACGCACTGATCTTTCTCGAACTTTCGAGAATGAGGATGATGCCTCATTTGACCAGGAGTGTAGGTCCTAGCGACATTACACGCATCATGAAGAACATACATATTGCTCACCTACCACCAATTCTCGCTCTAAAAAATAAGACACACATCAATCTGATGGCTAACAATGGGATAGACTTACTCGGAAACCACGAGAGTCGATACATCATGTAG

Protein sequence

MKEWFMGETMWERLHQNHSVIKMHALIFLELSRMRMMPHLTRSVGPSDITRIMKNIHIAHLPPILALKNKTHINLMANNGIDLLGNHESRYIM
Homology
[Close]
BLAST of IVF0010817 vs. ExPASy TrEMBL
Match: A0A0A0KGN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344260 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.7e-08
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 1  MKEWFMGETMWERLHQNHSVIKMHALIFLELSRMRMMPHLTRSVGPSDITRIMKNIHIAH 60
          M+  FM   +W +  QN  V+KM  L+ LELSR  +MPHLT+ +      RIM+   IAH
Sbjct: 1  MRGRFMDAKIWGQRRQNRLVVKMSRLL-LELSRTGIMPHLTKLIP----HRIMEIKQIAH 60

Query: 61 LPPILALKNKTHINLMANNGIDLLGN 87
          L P L + NKTHIN +ANNGI    N
Sbjct: 61 LLPTLVINNKTHINSIANNGIGFTWN 81

[Close]
BLAST of IVF0010817 vs. NCBI nr
Match: KGN47497.1 (hypothetical protein Csa_019005 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 4.14e-12
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 1  MKEWFMGETMWERLHQNHSVIKMHALIFLELSRMRMMPHLTRSVGPSDITRIMKNIHIAH 60
          M+  FM   +W +  QN  V+KM  L+ LELSR  +MPHLT+ +      RIM+   IAH
Sbjct: 1  MRGRFMDAKIWGQRRQNRLVVKMSRLL-LELSRTGIMPHLTKLIPH----RIMEIKQIAH 60

Query: 61 LPPILALKNKTHINLMANNGIDLLGN 86
          L P L + NKTHIN +ANNGI    N
Sbjct: 61 LLPTLVINNKTHINSIANNGIGFTWN 81

The following BLAST results are available for this feature:
BLAST of IVF0010817 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0010817 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGN74.7e-0847.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344260 PE=4 SV=1[more]
BLAST of IVF0010817 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47497.14.14e-1247.67hypothetical protein Csa_019005 [Cucumis sativus][more]
BLAST of IVF0010817 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010817.1IVF0010817.1mRNA