IVF0010816 (gene) Melon (IVF77) v1

Overview
NameIVF0010816
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 16971227 .. 16971469 (+)
RNA-Seq ExpressionIVF0010816
SyntenyIVF0010816
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAGAGCTCTTGCAACCAGATTAAGGCATCGTTGGACTCTATGACTAACAATAATGAGGAATGTGATGATGATGACTTCTGTTCTCACCGAAGAGGAAGAGGAAAGAATGAAGAAGGATTAGATGGGAACGAAGTGGTGGCACTACAAGGACAAATGACCGCAATGAACAACTTGTTGCAATCAATAGTGTTATCACAAGTCAACGTCAGGAGTAGCTCATTTCAAGTGGTGAAGTAG

mRNA sequence

ATGTTGAAGAGCTCTTGCAACCAGATTAAGGCATCGTTGGACTCTATGACTAACAATAATGAGGAATGTGATGATGATGACTTCTGTTCTCACCGAAGAGGAAGAGGAAAGAATGAAGAAGGATTAGATGGGAACGAAGTGGTGGCACTACAAGGACAAATGACCGCAATGAACAACTTGTTGCAATCAATAGTGTTATCACAAGTCAACGTCAGGAGTAGCTCATTTCAAGTGGTGAAGTAG

Coding sequence (CDS)

ATGTTGAAGAGCTCTTGCAACCAGATTAAGGCATCGTTGGACTCTATGACTAACAATAATGAGGAATGTGATGATGATGACTTCTGTTCTCACCGAAGAGGAAGAGGAAAGAATGAAGAAGGATTAGATGGGAACGAAGTGGTGGCACTACAAGGACAAATGACCGCAATGAACAACTTGTTGCAATCAATAGTGTTATCACAAGTCAACGTCAGGAGTAGCTCATTTCAAGTGGTGAAGTAG

Protein sequence

MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTAMNNLLQSIVLSQVNVRSSSFQVVK
Homology
BLAST of IVF0010816 vs. ExPASy TrEMBL
Match: A0A5D3E1V8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001000 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.6e-34
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0

Query: 1  MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTAMNNL 60
          MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQM AMNNL
Sbjct: 1  MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMAAMNNL 60

Query: 61 LQSIVLSQVNVRSSSFQVVK 81
          LQSIVLSQVNVRSSSFQVVK
Sbjct: 61 LQSIVLSQVNVRSSSFQVVK 80

BLAST of IVF0010816 vs. ExPASy TrEMBL
Match: A0A5A7SYS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00380 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-33
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 0

Query: 1   MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTAMNNL 60
           MLKSSCNQIKA+LDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMT MNNL
Sbjct: 32  MLKSSCNQIKATLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTVMNNL 91

Query: 61  LQSIVLSQVNVRSSSFQVVK 81
           LQSIVLSQVNVRSSSFQVVK
Sbjct: 92  LQSIVLSQVNVRSSSFQVVK 111

BLAST of IVF0010816 vs. ExPASy TrEMBL
Match: A0A5D3CSC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1610G00360 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.0e-16
Identity = 54/77 (70.13%), Postives = 58/77 (75.32%), Query Frame = 0

Query: 4   SSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTAMNNLLQS 63
           SS NQI  +LDS+  NNEE DDD F SHR GRGKNEEGLD N +V  QGQMTAMNNLLQ 
Sbjct: 25  SSYNQINETLDSIAINNEEWDDDGFDSHRGGRGKNEEGLDRNVMVVPQGQMTAMNNLLQL 84

Query: 64  IVLSQVNVRSSSFQVVK 81
           +V  QVN  SSSFQ VK
Sbjct: 85  MVFLQVNAASSSFQSVK 101

BLAST of IVF0010816 vs. ExPASy TrEMBL
Match: A0A0A0K6F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307410 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 9.3e-13
Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 0

Query: 1   MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTAMNNL 60
           ML+SS NQIKA+LDSM+NN++E DD  F S  RGR K  EGLD + VV LQGQM AMNNL
Sbjct: 59  MLRSSYNQIKATLDSMSNNSQEWDDIGFGSRHRGRTK--EGLDKSVVVVLQGQMIAMNNL 118

Query: 61  LQSIVLSQVNVRSSSFQVVK 81
           LQS+ LSQVN  ++    VK
Sbjct: 119 LQSMTLSQVNAANNYIHAVK 136

BLAST of IVF0010816 vs. ExPASy TrEMBL
Match: A0A5D3DIM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00460 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10
Identity = 47/83 (56.63%), Postives = 52/83 (62.65%), Query Frame = 0

Query: 1   MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGK-------NEEGLDGNEVVALQGQ 60
           MLKSS  QIK +   M  NNEE DDDDF S + G GK       NE+G D N VVA QG 
Sbjct: 167 MLKSSYTQIKTTSGFMATNNEEWDDDDFDSRQEGIGKDKNHDGSNEKGFDKNVVVASQGP 226

Query: 61  MTAMNNLLQSIVLSQVNVRSSSF 77
           M  MNN+LQS+ L QVN  SSSF
Sbjct: 227 MIVMNNILQSMALLQVNAASSSF 249

BLAST of IVF0010816 vs. NCBI nr
Match: TYK29856.1 (hypothetical protein E5676_scaffold208G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (385), Expect = 1.99e-46
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0

Query: 1  MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTAMNNL 60
          MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQM AMNNL
Sbjct: 1  MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMAAMNNL 60

Query: 61 LQSIVLSQVNVRSSSFQVVK 80
          LQSIVLSQVNVRSSSFQVVK
Sbjct: 61 LQSIVLSQVNVRSSSFQVVK 80

BLAST of IVF0010816 vs. NCBI nr
Match: KAA0035763.1 (hypothetical protein E6C27_scaffold403G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (383), Expect = 1.03e-45
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 0

Query: 1   MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTAMNNL 60
           MLKSSCNQIKA+LDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMT MNNL
Sbjct: 32  MLKSSCNQIKATLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTVMNNL 91

Query: 61  LQSIVLSQVNVRSSSFQVVK 80
           LQSIVLSQVNVRSSSFQVVK
Sbjct: 92  LQSIVLSQVNVRSSSFQVVK 111

BLAST of IVF0010816 vs. NCBI nr
Match: KAA0038192.1 (hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa] >TYK14793.1 hypothetical protein E5676_scaffold1610G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 3.04e-22
Identity = 54/77 (70.13%), Postives = 58/77 (75.32%), Query Frame = 0

Query: 4   SSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTAMNNLLQS 63
           SS NQI  +LDS+  NNEE DDD F SHR GRGKNEEGLD N +V  QGQMTAMNNLLQ 
Sbjct: 25  SSYNQINETLDSIAINNEEWDDDGFDSHRGGRGKNEEGLDRNVMVVPQGQMTAMNNLLQL 84

Query: 64  IVLSQVNVRSSSFQVVK 80
           +V  QVN  SSSFQ VK
Sbjct: 85  MVFLQVNAASSSFQSVK 101

BLAST of IVF0010816 vs. NCBI nr
Match: KGN44484.1 (hypothetical protein Csa_015918 [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 4.92e-18
Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 0

Query: 1   MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTAMNNL 60
           ML+SS NQIKA+LDSM+NN++E DD  F S  RGR K  EGLD + VV LQGQM AMNNL
Sbjct: 59  MLRSSYNQIKATLDSMSNNSQEWDDIGFGSRHRGRTK--EGLDKSVVVVLQGQMIAMNNL 118

Query: 61  LQSIVLSQVNVRSSSFQVVK 80
           LQS+ LSQVN  ++    VK
Sbjct: 119 LQSMTLSQVNAANNYIHAVK 136

BLAST of IVF0010816 vs. NCBI nr
Match: KAA0025357.1 (hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa] >TYK23443.1 hypothetical protein E5676_scaffold605G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 4.47e-14
Identity = 47/83 (56.63%), Postives = 52/83 (62.65%), Query Frame = 0

Query: 1   MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGK-------NEEGLDGNEVVALQGQ 60
           MLKSS  QIK +   M  NNEE DDDDF S + G GK       NE+G D N VVA QG 
Sbjct: 167 MLKSSYTQIKTTSGFMATNNEEWDDDDFDSRQEGIGKDKNHDGSNEKGFDKNVVVASQGP 226

Query: 61  MTAMNNLLQSIVLSQVNVRSSSF 76
           M  MNN+LQS+ L QVN  SSSF
Sbjct: 227 MIVMNNILQSMALLQVNAASSSF 249

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E1V89.6e-3498.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SYS51.6e-3397.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CSC74.0e-1670.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K6F99.3e-1362.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307410 PE=4 SV=1[more]
A0A5D3DIM82.5e-1056.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK29856.11.99e-4698.75hypothetical protein E5676_scaffold208G001000 [Cucumis melo var. makuwa][more]
KAA0035763.11.03e-4597.50hypothetical protein E6C27_scaffold403G00380 [Cucumis melo var. makuwa][more]
KAA0038192.13.04e-2270.13hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa] >TYK1479... [more]
KGN44484.14.92e-1862.50hypothetical protein Csa_015918 [Cucumis sativus][more]
KAA0025357.14.47e-1456.63hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa] >TYK234... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010816.2IVF0010816.2mRNA