IVF0010784 (gene) Melon (IVF77) v1

Overview
NameIVF0010784
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 24602430 .. 24603662 (+)
RNA-Seq ExpressionIVF0010784
SyntenyIVF0010784
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCGAACTGTAGCCAAAATAATAAATCCTTCCTCTCAAAATCTTCTACAGCTTTGCAACTCCCGGCTCTTTTTTTCCCGATCCATTGGCTGAAAATTTGTGGTGTTCGATTTGAATTTGAGTCCTCAATTTGTAGAACAACAACAGTCTTTCGCTTCGAAATTTCTCCGTTAAGGTAGATTTCTGTATTTCTTCTTCAGCTTTTAGTTTTTTTTTTTTAATTGCTTTATCATTATTGGTTTGATTCTGCGTTTGGCTTAAGATTCCTGGATTTTTTTTTTTTGGTTACTTTCGGTTGCAATGTTTGAAAAGCAAGTTTTCGGAAAGTCAATTACTAGTGGGAGAAGGAGGAGGTTGCTTCAGGAAGAAATTGAATTGAGATTTTGTTTGTGTTTGGAATTTGAGAGTTTTGATGATTTAGAGGTATTTGTCGGTTTGTTTAAATTTTCAGTGCTTGAATGAGTCTGAATCGAACAAGAGAACGTGATTGTTTCTTTTTTTGAATTTTTTTTCTCTGTCCTTTTTTTTATGTAGAAACAATATTAAATTGTAGGTTCTTTGAATGTAGCCGACTTTTTGAGTAGAAGCAATCTCTTGAAATGGAAGAAGGGAAAAAGGATTGTTCATGGCTTTAATCGTGAATTTTGAGGGAGATAAATTTAGTAAAGGCGTGTTTCCTTTTTTGGACACAGCTCGATTTTATCAAGTTGGTTTCTCGGTAGTGGTTATTGTTTTGATTTATCTTTTTCCAATTCTGTGAAAGCTTCTATATAGATTGGGCAACTGGATTTAGAAATTTTTGTCATTCGTAATCATATCCTAAAAGTTATATATGTATATTTCATTAGCTATTTTTTCATGTTCTTCTGTCTTGATTCTACAATCTGGAAACTTGGTCAAAAGCCTTGAAGAATCTTAGATGATTCCTGATTTTCAAGGCTTGAAGTAAGGTAAAACAGAGTTATCTCTCTTCTTTTTCTTCCTTCCTGAGCTTGTGGGATCCTTTGGATACATTCAAAACTCCAGCGTTTAGTCAATTATGCTACATTAGATGTGATGAAATTCGATTGTTTGTTTCTTCATTTTGTTAATATGGGCGATCTATGATTGCAGCAATCTCGTTTGTTGTTGTTTCGCAATTTGATTGTTCAGTTTCTTCCTGCTATCTTATCCTTAACAGGGAAAAACTTGCTCCATTTCACCTCTCATACTTTAGAATCCACCTGTGA

mRNA sequence

ATGGATCCGAACTGTAGCCAAAATAATAAATCCTTCCTCTCAAAATCTTCTACAGCTTTGCAACTCCCGGCTCTTTTTTTCCCGATCCATTGGCTGAAAATTTGTGGTGTTCGATTTGAATTTGAGTCCTCAATTTGTAGAACAACAACAGTCTTTCGCTTCGAAATTTCTCCGTTAAGGGAAAAACTTGCTCCATTTCACCTCTCATACTTTAGAATCCACCTGTGA

Coding sequence (CDS)

ATGGATCCGAACTGTAGCCAAAATAATAAATCCTTCCTCTCAAAATCTTCTACAGCTTTGCAACTCCCGGCTCTTTTTTTCCCGATCCATTGGCTGAAAATTTGTGGTGTTCGATTTGAATTTGAGTCCTCAATTTGTAGAACAACAACAGTCTTTCGCTTCGAAATTTCTCCGTTAAGGGAAAAACTTGCTCCATTTCACCTCTCATACTTTAGAATCCACCTGTGA

Protein sequence

MDPNCSQNNKSFLSKSSTALQLPALFFPIHWLKICGVRFEFESSICRTTTVFRFEISPLREKLAPFHLSYFRIHL
Homology
[Close]
BLAST of IVF0010784 vs. ExPASy TrEMBL
Match: A0A0A0LRV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370500 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.1e-31
Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 0 

Query: 1  MDPNCSQNNKSFLSKSSTALQLPALFFPIHWLKICGVRFEFESSICRTTTVFRFEISPLR 60
          MDPNCSQNNKSFL KSST LQLPALFFPIHWLK CGV+FEFESSICRT TVFRF+IS LR
Sbjct: 1  MDPNCSQNNKSFLLKSSTTLQLPALFFPIHWLKFCGVQFEFESSICRTATVFRFQISSLR 60

Query: 61 EKLAPFHLSYFRIHL 76
          EKLAPFH+SYFRI+L
Sbjct: 61 EKLAPFHISYFRIYL 75

[Close]
BLAST of IVF0010784 vs. NCBI nr
Match: KGN62751.1 (hypothetical protein Csa_022116 [Cucumis sativus])

HSP 1 Score: 142 bits (357), Expect = 2.63e-42
Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 0 

Query: 1  MDPNCSQNNKSFLSKSSTALQLPALFFPIHWLKICGVRFEFESSICRTTTVFRFEISPLR 60
          MDPNCSQNNKSFL KSST LQLPALFFPIHWLK CGV+FEFESSICRT TVFRF+IS LR
Sbjct: 1  MDPNCSQNNKSFLLKSSTTLQLPALFFPIHWLKFCGVQFEFESSICRTATVFRFQISSLR 60

Query: 61 EKLAPFHLSYFRIHL 75
          EKLAPFH+SYFRI+L
Sbjct: 61 EKLAPFHISYFRIYL 75

The following BLAST results are available for this feature:
BLAST of IVF0010784 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0010784 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRV17.1e-3188.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370500 PE=4 SV=1[more]
BLAST of IVF0010784 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62751.12.63e-4288.00hypothetical protein Csa_022116 [Cucumis sativus][more]
BLAST of IVF0010784 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010784.1IVF0010784.1mRNA