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IVF0010702 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCACCTTTTCATTAAGAAAATTTTAATTAAGAAACTCTTTCCCTCTACCCATTACCCAACCCGGAAATCGCACCAAGCCCTAAAAACATCTCCATCTCTACCTCCTCCTCTCCTTCACCGGCGAACCACGCTTCTGCATGAACCACCAACTGAAGAACGGGCGATGGCGAACCACGCTTCTGTGAACCACCACTCTGAACGATTCTGCATGGTCGACGACCTCGAACGTCCATCGTCGATGCTACCGGCAACCTTCGTTGGGGTTGGGGCGCTTCACAGCAAGGTTAATTTACCTCTTTCGGCCTCCTGTGGTTTACAAATTTGTTCCTTCCTTGATTATGATATTGCTGGATAGGTTTGTATTGTTAGAAAATCAAAATCATATCAATAAGGATGCAAAGTTTTATGATATGAAATGACATGGCTTTATCCATAGGATAAAGCAAATCCATTGGCAACAGTTCTCAGTGCTGCTATGCTTCTAAAGTATGGCCTCGGTGAAGAAAATGCTGCCACAAGAATTGAGGCTGTAGTTTTGGATACACTAGGCAGAGGATTTAGAATTGATGACATATACTTGGCTGGATGTGTACGTATTCCTTCTCTCTTTCTCTCTTATTAGTCTTTGGATACTTCGTCCAGTAGTGATCAAATGACTTGAACCAATATATTTTAAATATCATGAAAATGAATAATGTAACTAGTTTTTGTCCCTATATTGATCAAATCGAGCTGGTTTTAGGGTTCAAATTACATCCATTATATGATCAAATGTATTGTGGAGTTAGGATGATCTGTTTCACTGCCAATTTTGATAACTATCCTTAGTACTTCCTCTTTTTGGTCATCATTCTAATGATCTTCTTGACTGCATAGAAACGAGTCGGATGCGAAGAGATGGGTGAGGAACTATTAAAGTCTATAAAGTCCCATATACTTGCTACAGTTTGAGTCGAACGTGGGCGATGGATTCTTTTTTCGCCTCTTAGCGTTGGTTTGCAAATGCGCTTTCATGTCAGTGTCCAACCTTCCTCTTTACAGTTATTCTTTTGCATCTGTATGAACCAGTTGAGTTTAAGGTCTTCTTTTTACCTTGGAACTATAAATAACTGTCATCTTAGGTTGTAACATTCTGACATTTTTGACAATAGGAAAATAAAATTATTTGTCCGGCCAATTTGCTGCTTCTTTCCCAATTTTTCATTCACATTGACTTAATTTGAAACAAAAAGGTTCAGAGTCAGAATGACAGAATCAAGGAATGAAGTGGATCATTTAGATTGCATAAGATGTATGTGATTAGTTTGGAAAAGTTTAACTTGACAACGTTGGGTGTCTTGAAGTTGCTTTAGTTTCTTAAGCTTAAACTTAACTTGACAACGTTGCAGGCAAAGGAGGATGGGCTATCTTCTATGAACCTTAAGAAAGAAGAGAAGTGGATTCCCTTATTAGGGATACGATTGATAAGGTCCTAATTCTTCGATTTGGGTGGTGTTCTGATTCAGTTTTTCTCCTTCTTGATAATATTATGTGTAACCAAGTCCTACTATTTCTAACATCCTCGAATTTTGTTTCTTTCTTCCACGGTTGATATGCTTTTTCAAAATTGATTATTTTCTTTTTCCATGTGTTTCATTCTTTTTCAATGGTTTAGCTTGCTAAGTGCGCACGAGAAGTATCCAAGTTTGCTTCAATAACATTAGTTGATATTGATTTAGAAGAAATGCAGGTTTATGTCAAGTACTTTGACATAACTCTTATACCGTCAGCTATTTTCTTCTTCAATGCCCATCATATGAAGATGGATTCAGGGTTAGTTTTATCCTGTTGGTCTTAGTTAATTCATTGCTTGATTTTTGTTTAAATATGTCTAGCATGGTTATAGAACTTTGCATGTGGATGTGGTCCATCTGTATGGCCTTAGCTACTTGGTTTGTGCAGTAGATTAGAATGATGTTATGGAGTGTCGTTATGATATTGTTGATTATTGTAGACATGCCCCCTAATCATTGTTTGAGTTTTCAATTTGGACACCCCCTCATTCTTTCAACTTTATTAGTTTGATGTAAAGTGTCGGAGTAGAGTAGTATATGCAAACATGATATATTCATTATTGTGATGATTTTTGTCCTTGATGTAGACATGCCTTCCCCCCTCCTCCTCATTGTTTGAGGATGTTTGAGATTTCATCTTAGACATGCCCTCCCCTTGTCATGATTGTTTTAGAATGTTTGGGTTTCATCTGTTTGAGTAGTGTCATAATGCTTTAAAACCGTTTATTGAGTTCAATGGTAATGAATTTGTTGCTTTTGATGTAGACATGCCCTCTTTCCTTATTATGAAGTTTGTTGCTTTTGATTTAGACATGTTTCCCCTTCTCATTCTTTTATAAAGAGTTTGAGTTTTAACCATTTGAGTATGTCATATTTAAAGTGTCTAAGTTTCATTTTTTGCTTACATGTTTTACTTATTTATTCTGTTATGTTGCATTTCAGATTTGACGCACAAATGGACTTCA CCCCACCTTTTCATTAAGAAAATTTTAATTAAGAAACTCTTTCCCTCTACCCATTACCCAACCCGGAAATCGCACCAAGCCCTAAAAACATCTCCATCTCTACCTCCTCCTCTCCTTCACCGGCGAACCACGCTTCTGCATGAACCACCAACTGAAGAACGGGCGATGGCGAACCACGCTTCTGTGAACCACCACTCTGAACGATTCTGCATGGTCGACGACCTCGAACGTCCATCGTCGATGCTACCGGCAACCTTCGTTGGGGTTGGGGCGCTTCACAGCAAGGATAAAGCAAATCCATTGGCAACAGTTCTCAGTGCTGCTATGCTTCTAAAGTATGGCCTCGGTGAAGAAAATGCTGCCACAAGAATTGAGGCTGTAGTTTTGGATACACTAGGCAGAGGATTTAGAATTGATGACATATACTTGGCTGGATGTGCAAAGGAGGATGGGCTATCTTCTATGAACCTTAAGAAAGAAGAGAAGTGGATTCCCTTATTAGGGATACGATTGATAAGCTTGCTAAGTGCGCACGAGAAGTATCCAAGTTTGCTTCAATAACATTAGTTGATATTGATTTAGAAGAAATGCAGGTTTATGTCAAGTACTTTGACATAACTCTTATACCGTCAGCTATTTTCTTCTTCAATGCCCATCATATGAAGATGGATTCAGGATTTGACGCACAAATGGACTTCA ATGGCGAACCACGCTTCTGTGAACCACCACTCTGAACGATTCTGCATGGTCGACGACCTCGAACGTCCATCGTCGATGCTACCGGCAACCTTCGTTGGGGTTGGGGCGCTTCACAGCAAGGATAAAGCAAATCCATTGGCAACAGTTCTCAGTGCTGCTATGCTTCTAAAGTATGGCCTCGGTGAAGAAAATGCTGCCACAAGAATTGAGGCTGTAGTTTTGGATACACTAGGCAGAGGATTTAGAATTGATGACATATACTTGGCTGGATGTGCAAAGGAGGATGGGCTATCTTCTATGAACCTTAAGAAAGAAGAGAAGTGGATTCCCTTATTAGGGATACGATTGATAAGCTTGCTAAGTGCGCACGAGAAGTATCCAAGTTTGCTTCAATAA MANHASVNHHSERFCMVDDLERPSSMLPATFVGVGALHSKDKANPLATVLSAAMLLKYGLGEENAATRIEAVVLDTLGRGFRIDDIYLAGCAKEDGLSSMNLKKEEKWIPLLGIRLISLLSAHEKYPSLLQ Homology
BLAST of IVF0010702 vs. ExPASy Swiss-Prot
Match: Q9FMT1 (3-isopropylmalate dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IMDH1 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.7e-13 Identity = 43/71 (60.56%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of IVF0010702 vs. ExPASy Swiss-Prot
Match: P29102 (3-isopropylmalate dehydrogenase, chloroplastic OS=Brassica napus OX=3708 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 5.1e-13 Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of IVF0010702 vs. ExPASy Swiss-Prot
Match: Q9SA14 (3-isopropylmalate dehydrogenase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IMDH3 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 6.6e-13 Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of IVF0010702 vs. ExPASy Swiss-Prot
Match: P93832 (3-isopropylmalate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IMDH2 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-12 Identity = 38/51 (74.51%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of IVF0010702 vs. ExPASy Swiss-Prot
Match: Q7NUC2 (3-isopropylmalate dehydrogenase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) OX=243365 GN=leuB PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.6e-09 Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of IVF0010702 vs. ExPASy TrEMBL
Match: A0A5A7UZ40 (3-isopropylmalate dehydrogenase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00210 PE=3 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of IVF0010702 vs. ExPASy TrEMBL
Match: A0A1S3CHX2 (3-isopropylmalate dehydrogenase 3, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501151 PE=3 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of IVF0010702 vs. ExPASy TrEMBL
Match: A0A1S3CJH3 (thioredoxin-like protein 4B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501151 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.9e-43 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of IVF0010702 vs. ExPASy TrEMBL
Match: A0A1S3CIE3 (uncharacterized protein LOC103501151 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501151 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.9e-43 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of IVF0010702 vs. ExPASy TrEMBL
Match: A0A6J1DGT0 (3-isopropylmalate dehydrogenase OS=Momordica charantia OX=3673 GN=LOC111020932 PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 44/52 (84.62%), Postives = 45/52 (86.54%), Query Frame = 0
BLAST of IVF0010702 vs. NCBI nr
Match: KAA0061172.1 (3-isopropylmalate dehydrogenase 3 [Cucumis melo var. makuwa] >TYK29933.1 3-isopropylmalate dehydrogenase 3 [Cucumis melo var. makuwa]) HSP 1 Score: 233 bits (594), Expect = 7.22e-77 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of IVF0010702 vs. NCBI nr
Match: XP_008462870.1 (PREDICTED: 3-isopropylmalate dehydrogenase 3, chloroplastic-like isoform X3 [Cucumis melo]) HSP 1 Score: 233 bits (594), Expect = 9.09e-77 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of IVF0010702 vs. NCBI nr
Match: XP_008462869.1 (PREDICTED: thioredoxin-like protein 4B isoform X2 [Cucumis melo]) HSP 1 Score: 182 bits (463), Expect = 8.73e-57 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of IVF0010702 vs. NCBI nr
Match: XP_008462868.1 (PREDICTED: uncharacterized protein LOC103501151 isoform X1 [Cucumis melo]) HSP 1 Score: 182 bits (463), Expect = 1.95e-56 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of IVF0010702 vs. NCBI nr
Match: PRQ50491.1 (putative 3-isopropylmalate dehydrogenase [Rosa chinensis]) HSP 1 Score: 85.5 bits (210), Expect = 9.39e-19 Identity = 44/51 (86.27%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of IVF0010702 vs. TAIR 10
Match: AT5G14200.1 (isopropylmalate dehydrogenase 1 ) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-14 Identity = 43/71 (60.56%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of IVF0010702 vs. TAIR 10
Match: AT1G31180.1 (isopropylmalate dehydrogenase 3 ) HSP 1 Score: 75.1 bits (183), Expect = 4.7e-14 Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of IVF0010702 vs. TAIR 10
Match: AT5G14200.3 (isopropylmalate dehydrogenase 1 ) HSP 1 Score: 75.1 bits (183), Expect = 4.7e-14 Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of IVF0010702 vs. TAIR 10
Match: AT1G80560.1 (isopropylmalate dehydrogenase 2 ) HSP 1 Score: 73.9 bits (180), Expect = 1.0e-13 Identity = 38/51 (74.51%), Postives = 40/51 (78.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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