IVF0010444 (gene) Melon (IVF77) v1

Overview
NameIVF0010444
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA-binding protein 24 isoform X1
Locationchr09: 991797 .. 996100 (+)
RNA-Seq ExpressionIVF0010444
SyntenyIVF0010444
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCATCTCTTCACATCCATTCCATCTCTCTTCATCTAACCCTAATTCCCCAACACAAGATTTAGAACATATTGTGAAAATTAAGGATCTTTTGATCTTCCCTTTGTGTTTTGTTTTGTTTTGTTTTGTTTTGCTTTTATTTTTTTTGTTAAGCTAAGATCATGACTCCATCTAACTTAGCAAGTCAATTTGGAGATACCACTTACACCAAAGTTTTTGTGGGTGGTTTGGCTTGGGAAACTCACAAAGACACCATGAAGAAATACTTTGAACAATTTGGTGATATCTTGGAAGCCGTCGTTATTACCGACAAAGCCACCGGCCGATCCAAAGGCTATGGATTTGTAATAATAATAACAAAACTCTCTCCCTTCCCCCCCTTCCCCTTTCTCTTTATATATCTTCCTTTCTTTCCCTTCCTGTAACCATGGAAGAGTGTTTTTCTTTTGCAGGTCACGTTTCGTGAACCCGATGCCGCTATGAGAGCTTGTGTAGATGCTTCTCCGGTCATCGACGGTCGGAGAGCCAATTGTAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCCACCCCTAAACACGGTATATTCACATTTAGATCTATCACTTCCAAACATGCTTTTGTAGTACTTGCTCTTTGTTTACGATCGATCCTTCATAACGAAACATAATAATGATTAAATGGTTATCGTTAAACAGAGTATGATTGATATATATATGTGTGTGTGTGTGTGTGTGAATTGAAGTTAAGTGGTTGGTTGATTTTGGTTTTGTTTTTTGAAATTGATCGTGTGTATAAAGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGAAGAAATAATTTTAGGGTATTAAGCTCAAATTTCCAGAGTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCTCCAACAACAACTTTCCCTCATTATGCCATCCAGCAAGGGATCCCTTACAATCTCTATGGGTAATTTCTTCTTTTTCTTTATTTCTCTAATAATTTATCTTTTATATATATATATATATATATTTCTCTCTCTACAACGTGACTTGCCAACTCATTTCTTCACTTTAATTACTTTATGACTAACAATAAGTCTATTTTCCCCCCCTTCATAATCACTCTAAATTAAAATTCATATTGTTTCCTCTTTAAGTTACTAGCTACAAACATTTATTTTCAGTTTGTTTTAATGTATATATCAATCAATATGCATGGCATTGCATGTATTTTTTGTAATTACTAATGGGGTATTTAGTTTAAAAAAATTAAACTTTCTTGTTAATTATTATTATCATTTTTTTTTTTAGGTACTCTTCTTATTCGCCAGACTACACTTACCCTACGGTTTGTACAAATTTCTTTTTCTATATTTTTATTGGGGAAATAAATAAATGAATGAATATTGAAGAAAGATGAATAAGGGTATAATTGGAAATTCATATGTGTAGATAATTGTGTGGTCAAACTGTTGAAAAAGTGAAAGTTAAGAGAACCATTTTCTCATGTTCTTTCTCTTGTCGTTTTATCCGACAGTTTTTGTTTCTACATTTAATGTTTTGTAACAGTATATATCACTTTCTTACTTACTGTTCTTTTTTTTTTCTTTTAAATAATGAAAATTCTTTTATAAGTTATTGTTTACACATTCTTTCATGCACATTATCATCAAACTGCCTCCTCCAACCCGACCACTCTACATTAAAAAACATACATCAATGGCATCTCAGCTGAGTTAGCTTCTCATATTTTCAATCACAGTTTATCAAGTTATAAGCAAACTCTTCTTTGAAGAATAATGTTTTCTTTTTCCTTTGTTATTGAAACAGAATAATGCATTTGAAAAATGATTTAATTGCGTAAGAATAATATATATTATCAGTTATATCTGAAGGACATAGGATATTTGAAAAGAACTGTTAACGAAAATGGGGTTAGTGTTTATGATTATTTATGATTAAGGCTTTGTATTAAAATTTCCAGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGGACGGGTCCGGGCGGCATATTGAGCGGAGCGGCAGCAGCAGCGGCGGCGTTCTACCCGTATTTCCAATTCGGGGAAGGAAGCGGTGGCGGCGGTTCGGGGCAGCAAGGGTATGGGGTTCAGTATCCTCACCATCTGTTTCAATACTCGGCCGCGATTAATTCAACTGCTGCAACAACTTTCCCTCAGCATTATGCTGCTCCTCCTATGTCTCTTCCTCCCACGCCCCCCACTTTGCCATCAGGTTTGTTTGTTGTTAACTCCGTTTGATAAATAATAATATATTTTGTTTTGATGCATGTTTATGTTATTGTTAATACATGCACAAAAATGATAAATAATTATTCATTGAAAAGAATGTCTCTAGATTTTTAGAGATGCATTTGTATTTGAACGTATCAAAAGAGTTTGAAAATGAGAGTTACAAATTTTAGGAAGAACATTTTTTATATAGTTAGCGCTTTTGTTTAAGTTGGGAAGAGTGAAAGAAAGACGTACTAACATCTTTGACAGTGTTTTTTGCTATTCCACAGGCGTGACCATGGCTCTTCCTGCACCAATTCCGCATCGTTAGAGACAACATATAATCTCTCATCGCCGACCTCGAATTCCCTCCAATTTGTCTTCTTCAATCAAACCAACTCAACCTTCGCCCTAACCATGGTTCAATCCCTTTTCTCTCTTCACTCTAACTCACTCATGCCTTTTAAGGCCAATCTTAGCCCCCCATAGGGGCTAACCTCAAAACCAACCATACCAATTCTCACCCTCTCCAAAATTGGAGCAAAATCATGCATTTCCATTGTTATTCATATTAATTAGGGTTTAGTGAAGAAAAACAAGTGAAAATGGTTCCTTTTATCAAGAGAACCAAAACCCACTTTGTGAAAAATCCCAATTTAGGCCATCAAGGGAATTGGCCTCAAATTGGTAATATTTGCACATAGCTTTGTTTTTTTTGTTGATCTTCAAAGCCTAGGAAAGGCTTTAAAGATTTAACCCAAAAAAACAAAAACATTTTTCCAAAAAAAAAAAAAAAAAAAAAAATATTGTATATTTTATCCTAAACACCACACCCCTCTTTTTCTCTTCCATCACTTTGAAAAAATTGGAATTGAAAAAAGGCTAATATTTTTCTCATCATCATTTTGTAATTAAACTTTTAATTAGGAAGTAAATTAGATGGAAAAATTTTCAAGAAATTGGTGAGGCTATGGCTGCCCCCACCTCTTTCTTAAAATTTGTAGATTTTTCTTTTTCAAAATTAATCACCAATCTTTCAAAATATTTTCCTCTCTAGGGCTAGTGGATAATTTTCATTATTTTTTTTTTTTTACAAATTTAATTTAGTAATAGTTTGGTCTAATCAACCAACATTATCTTTGACACATTATTTCCCTTGGGTTAGGGGAATAATACCTTAATCTCTTTGATTAATTAACTCTTAATTAAGCACATTAGTTAATTTTTCTTGTGTAATTAAAGTTTTCATCAACAATCATGGTTGAACTTATGGGAGTTTACAACCATGTTTATTTTTGGTAAACCAAAGCACAAATATTGCATTTGGTTTAACTTTTTTTTCTTTTTTTCTTTTGGTGCATTTAGGTTATTTCATAATTAGAAATTATAATTAGGATAATTAGGATTAAGCATGTCATGAAATTTTGAGATATTCCATTAATGGATATTGGAAATCTCAAAATTAAAGCATTTTGCATATTAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTTTTTTTTTCTTTTCTTTTCTTTTTTCCTTTCAAACTAACCCAACCAACCAACCATGGTTAGGACTTAGGTCAACTTCATTTCTCTCTATCTCTTTTCTTCACCCCATTCTTCCCATTTTACCTTTTTTTTTTCTTTTCATTTCATCTCTTCAATCATCCATCCTTTCATTTTCATGTGGTTGTGTGTTCAAGCTTAGCACTTTCTTCTTTCATGGAGTTGGTGGAACTTGGAAACACTTTTTTTTTTAATTAATTATGTTTGTAAAAGAAGAGCCTTTTTTTCAAAAAAAAAAAAATTGTCCTTTTTTTATGGTTTGTAATGTAATTAGATGGTTTAATTACTACCCTTTTTCCTTTTTTATGTTAAGGACTACTTTAATTCTCTCTACTAAGATCCATTAAGTTCTTCATTAGTTGCATGCTCCTAATTTGCAGCTGCTTGAAGAATATAACAT

mRNA sequence

TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCATCTCTTCACATCCATTCCATCTCTCTTCATCTAACCCTAATTCCCCAACACAAGATTTAGAACATATTGTGAAAATTAAGGATCTTTTGATCTTCCCTTTGTGTTTTGTTTTGTTTTGTTTTGTTTTGCTTTTATTTTTTTTGTTAAGCTAAGATCATGACTCCATCTAACTTAGCAAGTCAATTTGGAGATACCACTTACACCAAAGTTTTTGTGGGTGGTTTGGCTTGGGAAACTCACAAAGACACCATGAAGAAATACTTTGAACAATTTGGTGATATCTTGGAAGCCGTCGTTATTACCGACAAAGCCACCGGCCGATCCAAAGGCTATGGATTTGTCACGTTTCGTGAACCCGATGCCGCTATGAGAGCTTGTGTAGATGCTTCTCCGGTCATCGACGGTCGGAGAGCCAATTGTAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCCACCCCTAAACACGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGAAGAAATAATTTTAGGGTATTAAGCTCAAATTTCCAGAGTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCTCCAACAACAACTTTCCCTCATTATGCCATCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCTTATTCGCCAGACTACACTTACCCTACGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGGACGGGTCCGGGCGGCATATTGAGCGGAGCGGCAGCAGCAGCGGCGGCGTTCTACCCGTATTTCCAATTCGGGGAAGGAAGCGGTGGCGGCGGTTCGGGGCAGCAAGGGTATGGGGTTCAGTATCCTCACCATCTGTTTCAATACTCGGCCGCGATTAATTCAACTGCTGCAACAACTTTCCCTCAGCATTATGCTGCTCCTCCTATGTCTCTTCCTCCCACGCCCCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATTCCGCATCGTTAGAGACAACATATAATCTCTCATCGCCGACCTCGAATTCCCTCCAATTTGTCTTCTTCAATCAAACCAACTCAACCTTCGCCCTAACCATGGTTCAATCCCTTTTCTCTCTTCACTCTAACTCACTCATGCCTTTTAAGGCCAATCTTAGCCCCCCATAGGGGCTAACCTCAAAACCAACCATACCAATTCTCACCCTCTCCAAAATTGGAGCAAAATCATGCATTTCCATTGTTATTCATATTAATTAGGGTTTAGTGAAGAAAAACAAGTGAAAATGGTTCCTTTTATCAAGAGAACCAAAACCCACTTTGTGAAAAATCCCAATTTAGGCCATCAAGGGAATTGGCCTCAAATTGGTAATATTTGCACATAGCTTTGTTTTTTTTGTTGATCTTCAAAGCCTAGGAAAGGCTTTAAAGATTTAACCCAAAAAAACAAAAACATTTTTCCAAAAAAAAAAAAAAAAAAAAAAATATTGTATATTTTATCCTAAACACCACACCCCTCTTTTTCTCTTCCATCACTTTGAAAAAATTGGAATTGAAAAAAGGCTAATATTTTTCTCATCATCATTTTGTAATTAAACTTTTAATTAGGAAGTAAATTAGATGGAAAAATTTTCAAGAAATTGGTGAGGCTATGGCTGCCCCCACCTCTTTCTTAAAATTTGTAGATTTTTCTTTTTCAAAATTAATCACCAATCTTTCAAAATATTTTCCTCTCTAGGGCTAGTGGATAATTTTCATTATTTTTTTTTTTTTACAAATTTAATTTAGTAATAGTTTGGTCTAATCAACCAACATTATCTTTGACACATTATTTCCCTTGGGTTAGGGGAATAATACCTTAATCTCTTTGATTAATTAACTCTTAATTAAGCACATTAGTTAATTTTTCTTGTGTAATTAAAGTTTTCATCAACAATCATGGTTGAACTTATGGGAGTTTACAACCATGTTTATTTTTGGTAAACCAAAGCACAAATATTGCATTTGGTTTAACTTTTTTTTCTTTTTTTCTTTTGGTGCATTTAGGTTATTTCATAATTAGAAATTATAATTAGGATAATTAGGATTAAGCATGTCATGAAATTTTGAGATATTCCATTAATGGATATTGGAAATCTCAAAATTAAAGCATTTTGCATATTAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTTTTTTTTTCTTTTCTTTTCTTTTTTCCTTTCAAACTAACCCAACCAACCAACCATGGTTAGGACTTAGGTCAACTTCATTTCTCTCTATCTCTTTTCTTCACCCCATTCTTCCCATTTTACCTTTTTTTTTTCTTTTCATTTCATCTCTTCAATCATCCATCCTTTCATTTTCATGTGGTTGTGTGTTCAAGCTTAGCACTTTCTTCTTTCATGGAGTTGGTGGAACTTGGAAACACTTTTTTTTTTAATTAATTATGTTTGTAAAAGAAGAGCCTTTTTTTCAAAAAAAAAAAAATTGTCCTTTTTTTATGGTTTGTAATGTAATTAGATGGTTTAATTACTACCCTTTTTCCTTTTTTATGTTAAGGACTACTTTAATTCTCTCTACTAAGATCCATTAAGTTCTTCATTAGTTGCATGCTCCTAATTTGCAGCTGCTTGAAGAATATAACAT

Coding sequence (CDS)

ATGACTCCATCTAACTTAGCAAGTCAATTTGGAGATACCACTTACACCAAAGTTTTTGTGGGTGGTTTGGCTTGGGAAACTCACAAAGACACCATGAAGAAATACTTTGAACAATTTGGTGATATCTTGGAAGCCGTCGTTATTACCGACAAAGCCACCGGCCGATCCAAAGGCTATGGATTTGTCACGTTTCGTGAACCCGATGCCGCTATGAGAGCTTGTGTAGATGCTTCTCCGGTCATCGACGGTCGGAGAGCCAATTGTAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCCACCCCTAAACACGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGAAGAAATAATTTTAGGGTATTAAGCTCAAATTTCCAGAGTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCTCCAACAACAACTTTCCCTCATTATGCCATCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCTTATTCGCCAGACTACACTTACCCTACGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGGACGGGTCCGGGCGGCATATTGAGCGGAGCGGCAGCAGCAGCGGCGGCGTTCTACCCGTATTTCCAATTCGGGGAAGGAAGCGGTGGCGGCGGTTCGGGGCAGCAAGGGTATGGGGTTCAGTATCCTCACCATCTGTTTCAATACTCGGCCGCGATTAATTCAACTGCTGCAACAACTTTCCCTCAGCATTATGCTGCTCCTCCTATGTCTCTTCCTCCCACGCCCCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATTCCGCATCGTTAG

Protein sequence

MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Homology
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BLAST of IVF0010444 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-27
Identity = 101/271 (37.27%), Postives = 135/271 (49.82%), Query Frame = 0 

Query: 2   TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGF 61
           T +N+   FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGF
Sbjct: 3   TSNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGF 62

Query: 62  VTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNN 121
           VTF++  AA RAC D++P+I+GRRANCNLASLG +  K  T    ++        G +N 
Sbjct: 63  VTFKDAKAATRACEDSTPIINGRRANCNLASLGGRLRKSPTMTSPQQ--------GPKNG 122

Query: 122 FRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQ--QGIPYNLYGYSSYSPDYTYPTSYYN 181
            R    +      GN    ++    T   +  Q  Q +P+  YGY S    Y  P   +N
Sbjct: 123 NRATPPHV-----GNHSQWYYPSGFTNQQHQQQNHQAVPF--YGYPS---AYVAPNMTFN 182

Query: 182 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHL 241
              G      M G          +     +Y +  +G G    G  S    +   YP+H 
Sbjct: 183 QKVGYVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYTVYPYHQ 242

Query: 242 FQYSAAINSTAATTFPQHYAAPPMSLPPTPP 269
            Q         A  FPQ   + P+S   TPP
Sbjct: 243 SQ---------AIGFPQPSFSKPLSF-STPP 245

[Close]
BLAST of IVF0010444 vs. ExPASy Swiss-Prot
Match: Q9BX46 (RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-24
Identity = 92/242 (38.02%), Postives = 118/242 (48.76%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           RAC D +P+IDGR+AN NLA LG   +KP                      R++   F  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP----------------------RIMQPGFAF 126

Query: 132 GFGGNVGSAFHSPTTTFPHYAIQQGI--PYNLYGYSSYSPDYTYPTSYYNVYGGATAQYP 191
           G      +    P     HY   Q    P  +  +   +      T Y +  G A AQY 
Sbjct: 127 GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQY- 186

Query: 192 MYGTGPGGILSGAAAAAAAF--YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINST 250
                     + AAAAAAA+  YPY      +G   +G  GY VQ P      +AA   T
Sbjct: 187 -------SAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQP-----ITAAAPGT 210

[Close]
BLAST of IVF0010444 vs. ExPASy Swiss-Prot
Match: D3Z4I3 (RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.6e-24
Identity = 92/242 (38.02%), Postives = 117/242 (48.35%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           RAC D +P+IDGR+AN NLA LG   +KP                      R++   F  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP----------------------RIMQPGFAF 126

Query: 132 GFGGNVGSAFHSPTTTFPHYAIQQGI--PYNLYGYSSYSPDYTYPTSYYNVYGGATAQYP 191
           G      +    P     HY   Q    P  +  +   +      T Y +  G A AQY 
Sbjct: 127 GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQY- 186

Query: 192 MYGTGPGGILSGAAAAAAAF--YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINST 250
                     + AAAAAAA+  YPY      +G   +G   Y VQ P      +AA   T
Sbjct: 187 -------SAAAAAAAAAAAYDQYPYAASPAAAGYVTTGGYSYAVQQP-----ITAAAPGT 210

[Close]
BLAST of IVF0010444 vs. ExPASy Swiss-Prot
Match: Q76LC6 (RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.2e-24
Identity = 91/247 (36.84%), Postives = 115/247 (46.56%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAD 66

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           RAC D +P+IDGR+AN NLA LG   +KP                      RV+   F  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP----------------------RVMQPGFTF 126

Query: 132 GFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTS---YYNVYGGATAQY 191
           G      +    P     HY   Q             P  T  T+   Y +  G A AQY
Sbjct: 127 GVPQIHPAFIQRPYGIPTHYVYPQAFMQPSVVIPHIQPTATSATASSPYIDYTGAAYAQY 186

Query: 192 PMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTA 251
               T        AAAAA   YPY      +G   +   GY +Q P  L   +    + A
Sbjct: 187 ASAAT-------AAAAAAYEQYPYAASPAATGYVAAAGYGYAMQQP--LATAAPGSAAAA 219

Query: 252 ATTFPQH 256
           A  F Q+
Sbjct: 247 AAAFGQY 219

[Close]
BLAST of IVF0010444 vs. ExPASy Swiss-Prot
Match: Q6GQD3 (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23
Identity = 89/244 (36.48%), Postives = 111/244 (45.49%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           RAC D +P+IDGR+AN NLA LG   +KP                      R++   F  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP----------------------RIMQPGFAF 126

Query: 132 GFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMY 191
           G      +    P     HY   Q             P     TS Y  Y   +A Y  Y
Sbjct: 127 GVQQIHPALIQRPFGIPAHYVYPQAYVQPGVVIPHVQPTAATSTSPYIDY--TSAAYAQY 186

Query: 192 GTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATT 251
                     AAAAAAA+  Y      +  G     GYG   P  L   +    + AA  
Sbjct: 187 ---------SAAAAAAAYDQYPYAASPAATGYVTAAGYGYAVPQPLTAAAPGSAAAAAAA 214

Query: 252 FPQH 256
           F Q+
Sbjct: 247 FGQY 214

[Close]
BLAST of IVF0010444 vs. ExPASy TrEMBL
Match: A0A1S4E2E1 (RNA-binding protein 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.3e-161
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 286
           SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 285

[Close]
BLAST of IVF0010444 vs. ExPASy TrEMBL
Match: A0A0A0KUN6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647270 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 275/279 (98.57%), Postives = 276/279 (98.92%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP 280
           SAAINSTAATTFPQHYAAPPMSLPPTPPTLPS V  A+P
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPS-VFFAIP 278

[Close]
BLAST of IVF0010444 vs. ExPASy TrEMBL
Match: A0A1S4E2E6 (RNA-binding protein 24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 275/279 (98.57%), Postives = 276/279 (98.92%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP 280
           SAAINSTAATTFPQHYAAPPMSLPPTPPTLPS V  A+P
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPS-VFFAIP 278

[Close]
BLAST of IVF0010444 vs. ExPASy TrEMBL
Match: A0A1S4E2E8 (RNA-binding protein 24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 277/285 (97.19%), Postives = 277/285 (97.19%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKH        GGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKH--------GGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 286
           SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 277

[Close]
BLAST of IVF0010444 vs. ExPASy TrEMBL
Match: A0A5A7T7A3 (RNA-binding protein 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001520 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.0e-150
Identity = 272/285 (95.44%), Postives = 272/285 (95.44%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYG             YYNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYG-------------YYNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 286
           SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 272

[Close]
BLAST of IVF0010444 vs. NCBI nr
Match: XP_011656046.1 (RNA-binding protein 24 isoform X1 [Cucumis sativus] >XP_016902396.1 PREDICTED: RNA-binding protein 24 isoform X1 [Cucumis melo])

HSP 1 Score: 579 bits (1492), Expect = 1.64e-208
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 285
           SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 285

[Close]
BLAST of IVF0010444 vs. NCBI nr
Match: XP_016902398.1 (PREDICTED: RNA-binding protein 24 isoform X3 [Cucumis melo] >XP_031741591.1 RNA-binding protein 24 isoform X3 [Cucumis sativus])

HSP 1 Score: 554 bits (1427), Expect = 9.89e-199
Identity = 277/285 (97.19%), Postives = 277/285 (97.19%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKH        GGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKH--------GGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 285
           SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 277

[Close]
BLAST of IVF0010444 vs. NCBI nr
Match: XP_016902397.1 (PREDICTED: RNA-binding protein 24 isoform X2 [Cucumis melo] >XP_031741590.1 RNA-binding protein 24 isoform X2 [Cucumis sativus] >KGN52604.1 hypothetical protein Csa_009109 [Cucumis sativus])

HSP 1 Score: 553 bits (1426), Expect = 1.57e-198
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPS 272
           SAAINSTAATTFPQHYAAPPMSLPPTPPTLPS
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPS 272

[Close]
BLAST of IVF0010444 vs. NCBI nr
Match: XP_038890037.1 (RNA-binding protein 24 isoform X1 [Benincasa hispida])

HSP 1 Score: 549 bits (1414), Expect = 1.48e-196
Identity = 275/290 (94.83%), Postives = 278/290 (95.86%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGG  
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 120

Query: 121 -----NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPT 180
                NFRVLSSNFQ+GFGGNVGSAFHSPTT FPHYAI QGIPYNLYGYSSYSPDYTYPT
Sbjct: 121 GVGGRNFRVLSSNFQTGFGGNVGSAFHSPTT-FPHYAIHQGIPYNLYGYSSYSPDYTYPT 180

Query: 181 SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPH 240
           SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYPH
Sbjct: 181 SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYPH 240

Query: 241 HLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 285
           HLFQYS AINS+AATTF QHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 HLFQYSTAINSSAATTFSQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 289

[Close]
BLAST of IVF0010444 vs. NCBI nr
Match: KAA0039354.1 (RNA-binding protein 24 [Cucumis melo var. makuwa])

HSP 1 Score: 543 bits (1399), Expect = 1.53e-194
Identity = 272/285 (95.44%), Postives = 272/285 (95.44%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGY             YNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGY-------------YNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 285
           SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 272

[Close]
BLAST of IVF0010444 vs. TAIR 10
Match: AT1G33470.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 250.0 bits (637), Expect = 2.3e-66
Identity = 154/270 (57.04%), Postives = 188/270 (69.63%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           +ACVD +PVIDGRRANCNLA+ GVQRSKPS+P H        G  GGR     ++S F++
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH--------GHVGGRG--MKVTSPFKT 122

Query: 132 GFGGNVGSAFHSPTTTFPHYAIQQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYPM 191
            F G   +A  SP   F HY     +PY N +G+SSYS DY YPTSYYNVYGGATAQ+PM
Sbjct: 123 HF-GTAATAIPSP-LPFSHYT----LPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHPM 182

Query: 192 YGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTAA 251
           YG+GP  +   AAA AA FYPY QF EG+G       GY  + YP+H+F YSA       
Sbjct: 183 YGSGP--MTGVAAAPAAGFYPYLQFAEGNG----PVTGYAPLHYPNHMFHYSA-----PG 242

Query: 252 TTFPQHYAAPPMSLPPTPPTLPSGVTMALP 280
             +P H+   P+SL P+ P +PS V  A+P
Sbjct: 243 GNYP-HHNGSPVSLAPS-PVIPS-VCFAVP 242

[Close]
BLAST of IVF0010444 vs. TAIR 10
Match: AT1G33470.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 245.4 bits (625), Expect = 5.7e-65
Identity = 154/271 (56.83%), Postives = 188/271 (69.37%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           +ACVD +PVIDGRRANCNLA+ GVQRSKPS+P H        G  GGR     ++S F++
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH--------GHVGGRG--MKVTSPFKT 122

Query: 132 GFGGNVGSAFHSPTTTFPHYAIQQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQYP 191
            F G   +A  SP   F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+P
Sbjct: 123 HF-GTAATAIPSP-LPFSHYT----LPYTNPFGFSSYSMDYNYPTQSYYNVYGGATAQHP 182

Query: 192 MYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTA 251
           MYG+GP  +   AAA AA FYPY QF EG+G       GY  + YP+H+F YSA      
Sbjct: 183 MYGSGP--MTGVAAAPAAGFYPYLQFAEGNG----PVTGYAPLHYPNHMFHYSA-----P 242

Query: 252 ATTFPQHYAAPPMSLPPTPPTLPSGVTMALP 280
              +P H+   P+SL P+ P +PS V  A+P
Sbjct: 243 GGNYP-HHNGSPVSLAPS-PVIPS-VCFAVP 243

[Close]
BLAST of IVF0010444 vs. TAIR 10
Match: AT1G22910.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 237.7 bits (605), Expect = 1.2e-62
Identity = 144/257 (56.03%), Postives = 167/257 (64.98%), Query Frame = 0 

Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQ 130
             ACVDA+PVIDGRRANCNLASLG+QRSKPSTP H        GGGG  NN RV+ S  Q
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH--------GGGGRINNMRVMMSTMQ 127

Query: 131 SGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQY 190
           +GF    G        TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY
Sbjct: 128 TGF----GPPPPPQPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQY 187

Query: 191 PMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINS 250
            +YG     GG L+ AAA+A  FYP        GG G  Q      + HHL  Y+     
Sbjct: 188 GVYGNRNSGGGGLTAAAASATPFYPC------GGGHGGVQFSQPQPFYHHLSSYN----- 232

Query: 251 TAATTFPQHYAAPPMSL 264
                 P HY+ P  S+
Sbjct: 248 ------PHHYSPPTFSM 232

[Close]
BLAST of IVF0010444 vs. TAIR 10
Match: AT1G22910.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 236.1 bits (601), Expect = 3.5e-62
Identity = 148/272 (54.41%), Postives = 172/272 (63.24%), Query Frame = 0 

Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQ 130
             ACVDA+PVIDGRRANCNLASLG+QRSKPSTP H        GGGG  NN RV+ S  Q
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH--------GGGGRINNMRVMMSTMQ 127

Query: 131 SGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQY 190
           +GF    G        TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY
Sbjct: 128 TGF----GPPPPPQPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQY 187

Query: 191 PMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINS 250
            +YG     GG L+ AAA+A  FYP        GG G  Q      + HHL  Y+     
Sbjct: 188 GVYGNRNSGGGGLTAAAASATPFYPC------GGGHGGVQFSQPQPFYHHLSSYN----- 247

Query: 251 TAATTFPQHYAAPPMSL-------PPTPPTLP 272
                 P HY+ P  S+       P  PP +P
Sbjct: 248 ------PHHYSPPTFSMQQGVTGFPLQPPLIP 247

[Close]
BLAST of IVF0010444 vs. TAIR 10
Match: AT1G22910.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 232.6 bits (592), Expect = 3.8e-61
Identity = 147/276 (53.26%), Postives = 172/276 (62.32%), Query Frame = 0 

Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQ 130
             ACVDA+PVIDGRRANCNLASLG+QRSKPSTP H        GGGG  NN RV+ S  Q
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH--------GGGGRINNMRVMMSTMQ 127

Query: 131 SGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQY 190
           +GF    G        TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY
Sbjct: 128 TGF----GPPPPPQPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQY 187

Query: 191 PMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINS 250
            +YG     GG L+ AAA+A  FYP        GG G  Q      + HHL  Y+     
Sbjct: 188 GVYGNRNSGGGGLTAAAASATPFYPC------GGGHGGVQFSQPQPFYHHLSSYN----- 247

Query: 251 TAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPI 283
                 P HY+ P  S+        S  T +   P+
Sbjct: 248 ------PHHYSPPTFSMQQGSRNRLSASTTSYSLPL 251

The following BLAST results are available for this feature:
BLAST of IVF0010444 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M1S32.1e-2737.27Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S... [more]
Q9BX462.1e-2438.02RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1[more]
D3Z4I33.6e-2438.02RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1[more]
Q76LC66.2e-2436.84RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1[more]
Q6GQD31.8e-2336.48RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1[more]
BLAST of IVF0010444 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E2E14.3e-161100.00RNA-binding protein 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 S... [more]
A0A0A0KUN61.1e-15398.57RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647270 PE=4 SV... [more]
A0A1S4E2E61.1e-15398.57RNA-binding protein 24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 S... [more]
A0A1S4E2E81.1e-15397.19RNA-binding protein 24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 S... [more]
A0A5A7T7A32.0e-15095.44RNA-binding protein 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6... [more]
BLAST of IVF0010444 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656046.11.64e-208100.00RNA-binding protein 24 isoform X1 [Cucumis sativus] >XP_016902396.1 PREDICTED: R... [more]
XP_016902398.19.89e-19997.19PREDICTED: RNA-binding protein 24 isoform X3 [Cucumis melo] >XP_031741591.1 RNA-... [more]
XP_016902397.11.57e-198100.00PREDICTED: RNA-binding protein 24 isoform X2 [Cucumis melo] >XP_031741590.1 RNA-... [more]
XP_038890037.11.48e-19694.83RNA-binding protein 24 isoform X1 [Benincasa hispida][more]
KAA0039354.11.53e-19495.44RNA-binding protein 24 [Cucumis melo var. makuwa][more]
BLAST of IVF0010444 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G33470.22.3e-6657.04RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G33470.15.7e-6556.83RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G22910.21.2e-6256.03RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G22910.13.5e-6254.41RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G22910.33.8e-6153.26RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 17..89
e-value: 9.2E-23
score: 91.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 18..73
e-value: 1.7E-15
score: 56.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 16..100
score: 16.551298
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..110
e-value: 1.9E-23
score: 84.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..115
NoneNo IPR availablePANTHERPTHR11176:SF16OS01G0876800 PROTEINcoord: 1..280
NoneNo IPR availableCDDcd12384RRM_RBM24_RBM38_likecoord: 16..91
e-value: 2.81286E-41
score: 135.435
IPR037366BOULE/DAZ familyPANTHERPTHR11176BOULE-RELATEDcoord: 1..280
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 15..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010444.1IVF0010444.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030154 cell differentiation
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003676 nucleic acid binding