IVF0010442 (gene) Melon (IVF77) v1

Overview
NameIVF0010442
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Locationchr12: 19647739 .. 19656808 (-)
RNA-Seq ExpressionIVF0010442
SyntenyIVF0010442
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACAAAAGCTTGTTTTATAATTTTGTCGGATTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAATGAGGAGGATAAAGTAGCTCGAAGTTCAAAGTGACCCTTGAGTGAAAAGGCAGGGTTAGCTAGTTAAATAGAGAATTTGCTTTAAATTAGTTTCATCTTCACCTTCTTCTTCTTTTTCCTTTAATTTCACAAAATCACAGAGATCGTAGAATAAAACACAAACCACTTCCTACGGAGTGGAATTGGGATGGCGATAGTGTCTACGTACGTATCTGATTTTTTAGACACTCTCTATTTTCATTTCAAAAATATATTTATATACTTCAAAAAATTTTCAAGTTACTTTTCTATAATAGGTCAATGAAATCTTAATATTTTAAATATAGTAAAATAAATTAAAATATTTATAAATATAGCAAAATTTTAATTTCTATTATCGATAGATAAACTTTTATAAATGTAGCAAAATTTTGTTTCGTAAATATTTTGTTAAATTTGACATTTTTTAAAATTTCTCGAATATATTTGGTAGCAAAATTAAAATATTACTCGATAATAAAATGTTATTAATTTATTTGTTGATATGTTTTATCTTCTAAAATTGAAAAATTATAAAAAAAAATTTAGATTTTATTAATAATATGTTGACTTCAACTATGTCTATAAAAAAATATCTATTACGGATAGAATATGAAAATTTTGTTAAATTTTATAAAAAAATTGGTTTATTTTGTTATATTTGAAAATGATTCTTAAAATTTTTGTATAATTATTATTATTTTAATAATATTATGATCTATAAGATTAATTGAAATTTGAGTTACTATCTAATGATGTATAAAGTTTAGATAAAAGCTTCATAAATCATAAATAGAAGAGGATTTTAACAAATCGTAGGACCTTGATATAAAGTTATATCACAACATGGAGATTAATGTCCACTTTTTTAAAACCATAGATACTAACTCCTAAATTTATCCAAATTATAGAGATCAAATTTGCACTTTTAACATAATTTATAACATATTGCATAATGCATATTTAAACCTATCTCTACTTGATATAATTATGTATTGCAAAATTTAAAACTCAAATTATTTTGAATATTATGAAAAATATAAAAATGTTATTGTTTTTCTGTACATTGTTTGGATTATAGAATCCGAAAACAAATTTTAGAAATAAAATCTAGATGGTAAATATTTGCAGCTTAGTGAATTTGAAAAAACATAAACATAATTTGAATTGTCAACCAGATAAATCTTACAACTTTTCTTTCCTATAACTATTAATGTTTTTCAATTATGCTTATAACAAAATTGTGTTTAAAATATTTATAAAATATAACGAAATTTTATAGTTTATGAGTGATACACATTAAATTGACCGTTAGTGATATTGATACAATATAAAATTTAACTATATTTTGTAAATATTTTGGTTCATTTTGTTATATCTACTTTCTATATATTGTCATGAAAAGAAAAGTCGTTTCGACCAAACACTTCAATTCCCCACTCAGGTTTTAAAAAAACAACACTATTTATTTCAGGTTTTAAAACCTAACTTTTCTGTATATTATGTGAAGTAGTTTTTTCATTGGCCACTTCCATTTCATTGATGACAAGGGACTAAATTGAATATTTTTAAACAAATGAGACTAAATTATTTCAAAACAAAATTTGTTGTTTTTATATTGCATAATAAAAGTGATTACATTTAGCTAAAGTATATATAAAACTATGTTGAATTAGAAAATTTAGTGTTTTATAATATGGATATCAGTGTGTTTAGGTTTTTAACTTTACATTATATATATTTTATCTTTCTTTTTTTAAGAAAAAAGATATTATATCTTTAAAGTACATATATATATATATATATATATAAAACTATGTTGAATGAATCACTTCTAATATTTTATATATTCAATTTGTTAATACAAATTGGCTCATACATTTGTCCTACTAGATACGTTTCTAATTTAGATCATGTGAAACATGATTTCTGAATTAATGATCAGCTCAACAAATTAAACATAAATATGGGTTAAAAAGTATGTTTAATATAATTAGTTTTATAAACTAATTTATATTTTCCTTGAATCGAATGGTTCAAATTCTCCTGTACTCAAAAGATATGTAGAAATATATTATTTAGAGAATAATTCGGCATTTGATAGAGGATGATAAAGATGGTGACAATGATGAGGATGATATCCCTCACAGGAAGTAAGTATACGATATATGTTTGATGTTGGCATGAGAAGTTCCATTTTCATTAGAGTATATCCTATAGTTCTAACTGTCATTTTGACTAATTGATTTAATGGATGACTATGAATTTATTTCCAAATATACAAACCTATCATGTTTATTTATTTTATTTTTGACACTATGTGAGAGTGGATTGAGCATCTGCTTGAAGAAGTTGAAGTTAATAGAATGCAAATTGAGTTAACTCAAAAAGATTTGGCAGGTAATTGAGTTAGCAAATAAGTATTTATATGGTTTTGATGACTTTCCAATCCATCCTCTATTTGGAACATATTAATTGACATAAAACAATTAAATGATAACTTTATTGTCTTTAAATTTTCGGTCTTTGTATTAAAATGAATACAACTCAATTGGCATACAGATCTGTTAGAAGCTATGAAATTATCTATTGTTTGAATCTTTTGTATCCCTAAACTTTAAATTATGAAATTCAGTTTTTCTCCTTAAGTTATATGTTATAAATTTGATCCATGTTGTCTATTTAAACGACACGTTTTGAAAATTTTCACATAAATCCTTAAAATATATAAATGGTGTATAATGTCTTGAGTTTAGGAGCAAACTTGTATGAATGAATCGAAATTACTTTCGAATGAAAGGGATCGTGAGGATATGAATTTATGGTTAATAAAGACTTAAAAAGAATTGAAAGTTTACTACTTCTACTGCACCTTAATTCTCTTTTGGCGACTCAAACAATAAAATTGCAAAATTTAAACATGCTTTATAAGCTTGGAGCAATTTTATGTTGGATGGCCTACTAAAAATTTTCCTTAAAAATATATGAGTGAGAACAAAGCATGTAAAAAAGACTCGGGTTAGTTTGTAGGATAATCTTCATTTTGAAAAATGTTCAAGACATGCATGAATATATCGATAACTTATGCATGTCATAGAGAATGAAGGGGAATACTGGATTATTAGGGTAGAGAGTTACAAGTACTTACAAGTTTTCTTCCTCTAAAATTTGAAGCTTAAATTTATTTGGCTGTTATTGAATTACTTGCAAAGTAGTAAACTTAGTTCCTCATCTTTTAAATTTGTTAACATTGCATGAATTTAGTAGACAAAAAAATTTTGATTTCTCGTAATTTTTTAATAGACATCAAATTTCAAATTAAAACTAAGCGTTTATTTTTTTGAAAATAAGACATTTTAGAAAAAAAAAAGTTGAAATATTTTTACGAAAAACTCAAAATAGTTTCACAAAACTTTGGTTATATCTTAAACATTGTTACGAAAAGAGTTTAAATGGAAACAAACTTTTTAATATATAACATGTCCTTAGTTTATAAACATTTCCAAATTAAAAACTATTTGATATATAAATTTAAATTTCAAGATTTTTTTTTTAAAAAAGATAAAATCTTTTAAATACTTTTGAAAGTTAAATAAACAAATACATATTAGTAAAATTGATAAACTCTATTTACCGATTAAAGTGAGGTTGACTAATAATATTAACGTGATATTTATGTTTAAAAATAGAAGATTCATATTACTATTTACTTTAATTATATGCCTAAAAAGAGTGCCACCTAATTAATTGATTGGCAATAATAATTGGATTGATATAAAATTAAATGGACTAATTAAAAACTAAATCTAAAGGATAATTAATAAATAATGTGAACCAAACTTGTAGAAAATACATAATTGAACCAAAGAAATAAGGATAATCAGCGTATTTATTTTATAGGAATATTTTTTTAGATGTTGAAGAATATTTTGTGGCATACTTAGGATGCCTGAAAAATCTTCAAATACACAACCCCGCACCTTTCTAATTCTACTAAACAAGAACAAGAGGTTAAGCTGATCGGTTGAAGGTAACTGTCTTTTGTTGCCCTCTATTTTTTAAATTTATTTTTTAGAAACAAATCAAAATCAAATCCACACCATATATATAATAATAATATAAAAATGACGAAAATGTGTTACATTATTCTACTTTCATAATTTTAAAACATATATTACACTCAAATAAATCTTTCTTCAAGTAACTTCAATCTATGCCTTTTTATTTACCTTCGTAAATAAATATTCGTGAGTTATTAACTAAACAAAATAAAAGAAAAAATAAGTTAATTTTTCACTTTAAACCTTTTTTTTTTCTTGAAGAAAAATCATATTAAACTAATGTCACTTGTTCGAGAATGAACAAAGATAGAATCTTACTTTTTTTTTTTTCCTCTTTACAAATCTAAAACTTATGTAATACTAAAAAGTAGTTAAAGAGAGTATATTTTTACTAGAGTAGTTGTTTTAAGAAAAGCCATATTAGTTTTTCTTTAATAAAAAGTAAATAATCTACCGTCCAACCACTAAAAAAATAACATTAATGAGTAAATTTTAACTAGGTATCTTATAATCAAGCAAAAAAACTCTATAACCACACCCGTTTTTAGGGGAAAAGAAGTGATCATACAATTGAGTAATTGCCTATATAAGTTAGCTTAAACTTGCTTTGACAAAAATCAATTCAACATGTAAGATATTATTTTTAATTAAATTAAAAATTTATAACTATTTGCAGGGAGGGTAACTTTTGTGGATATAGAATTGACCACACAATAGTGGTAATGGGTACAGAATGGATGAAGAGGAAGATTATTGGATAATAAGGAACCAATGGAAAATTGGATGGGAAATGAATAGTTATATGAAGTGCAACGAGGAGCACAGTCCTCACAAGGTGTATGTGGAATGACAATGCAACCCGCCTATCACGTCTAGCACTAGATTTTGCTCTTTTTAGTTTAGTTTCTTTTATTATAATTGGGTAGCTCGCTAAGTTTTATTCGCTTGCTACTTCTGAAAATAGTGCGGAGAGTTGCTTTTTCCTTTTAGTGTAGCAATTCGTATAATAAATAAATAAAGTTGTTTATTTATTCATGGAGAATTGTCGATAACGACAAATTTGACAAAATATTTACATAATATAGCAAAATTTCAAATTCTATCGATGATAGATATTGATAGACACTAATATGCTTATATCAGTCATATTGATAGACAATAATAGAAGTCTTTAAGTGTCTACCATTGATAGAATCCAAAATTTTACTATGTTGTAAATATTTTCGTTTATTTTACTATATTTAATTAAAAATGATATTTTATTTATTTCCACAATTTTTATTTTATATTCATTCCATTTGAGTATTCATTCACTAATAACTGTAGTGTATAATTTTTCTTATGATTTACTATGAAATAATTAGCCTTGCGAAATAATACCCACAAATTTATTGTTGCTAAATTTATTAACCTTGCGAAAATCTAATTAAATTTATTTTGTGATATTTGTAAACACCACTCTATCAATATTTGTCGATAGAATATCAAATATTTCAATAGTATTATATTAATAATATATATATATATATATATGAGCTAACATATGATTGATTTGAAGATGGAGAAGACAATGGTGCCTGCATATCTCCTCAAATAATTTATCATACTTTAATCAATGAATTATTTTCCAACGGACAAATTATATTAATATGGAGAATATAAATGTAACCAAAATTTGAGAGTATAGTGATGAGGTGGGTGGTGGTAGGATCTCAATTTTATAACAACACACCACACTATTATTTGCTTTTTCAATAACCTAATATATGAACCTCTTTTTTCTTTCGCTATGATGTTGCTGCAAAATGCTAATTTAATATATATATATATGAAAATAAAAGTTTTTTCTTTTTTGACATTTAAATCTAATTTCAATTTAGTTATTTAAGTTTCAAAACGTTGGTTTACATTATTATTCTTGAGTTTTGAGGTCTTTGGTCTCTAGCTAAATTTTGAGATTTGTTTTTTTAACCATTGGTTTTTTCACCAAATGCTTCACTTTTGTCATTTGCTCAAGAAAATTTGCTAAGGGTTGTTCCCTCTCATTTGGTTGCCTGTCATACCATATTTAAGTAAAACGGCCTATTTACTTGGTGGGCCAATAATGCAAATGTTTTAGAGAGCGTTTAACGAAATAATTATATGTTTCGATGATAAGTATCACGATAAGATAAGGTATTTTTTCAATGTATGAAATTTGTGTCCATTAGTAACAAAAATATAATTATTTGTCCAAGAAAATATAAGACAATGAACAAAAATAATTATAAAATATAGCAAAATTTCAAATTCGATCAATGATAGACTTTTATTTGTGTCCATTAGTAACATTGATAGACACACATTCTATCGTTATCTATCAATATCTGTCATCGATAGATTCTGTAATTTTGCCAATATCATTTTAGAATTATAAAGTGAGGATCATAATCTATAAAGTCTTGAACAAATAATGATGTATTAATCATTAAACTATATTCATGCGTTGGATCTCAAACTATTAACAATGAAGTATTTCCACCAAATGCCAAACCAACAACAATATATTAGGTATAAAAGTATAATCATACCCAATGAACTTCCGTTTTTTCTAAAAGAAAGTATCAATAAATCCGGGTATAGATCCATAAAAATATAGACATCGATTATTATCACAAACGTTCATGGTGGATCTCTACCCTACAATTATTGAACTAACAAACTATAATGTGATATCTAATTCCAAACATAATAAAATAAAATCCAGTTCATCAAGCATAAATTCATTAAACAAGACACCTATAGTAGTCTTAAATATGGATACTTTTGGTCTATTTCATCTAAAGTGGTAGAAAGAACAAATCTTCCTTACCCTTCTTGTTCCCTCACCCATCTACTTTTTCTTAAAAAAAAGTATAAGAATATAAATTTGTATATGTTTGTGTATATTGATGATATATGTTTTGAGTCATTTGTGATTATGATGGTAATTATTAAATTTTGAAGTGTTGTTACTTAATTATCTATGAGATAGTGTATAAATAAGTTGATGTATTTTCCTTTAAAAAAATGTATTTGTAAGAAATTTCAACTATACATGTATCCATTATTTGAAATATAATGTTACTTTTTTTTTTTTTTTTTTGCTAGGGGTGAGTTTGAATTAAAAGCATATAATCTAACATATATTTAAAAAATAGTAAAGATAATAAAATAAAGAAGATAGCATAATTCAGGAAAAATTAAAAATAATAACTTGAGATTAGAGAAGAGTTTGGTATGCAAGGGCCTAGTCCAAACCAACATTTTTATACATGCATGTCGTGGTCTAAAGGAATATTCATCTTGAACCCGAAAGTAGGACTAAAAAGATGTTTATCCTGAACTTTGATTGAGGTTGAACCCTAGCAAAATACCAAACAGAATACGTCTCTTGTACATCCTAGCCTAGTTAGTCAAAGGATAAACCCAATGCAACTTATAACTCTAAGAATAAGATCATGTCAAATTAATACTTCTATAATTAAATATATCAGGGTAGCTTTAGGGAGAAGCAAGTCCATCATAGTACTCAAATTCTCTAATTGCTACATATGTGCACTTTTTGACTAGTACTTAAGCATCAGAGATACATTATATGGCATGACAGAGATCTTTCCATCTAACATGTCATATACTTTCTCAAATTACAATTAATTATTATTGTCACATGAATGGAAATTTCACCATTTAATTCAAATTTTTTGCCAATTAAATCGTTTCACGTCATCACAGTAAAATTATGATGATTATAATTTGATTAAATTTGGGTAGTCAAATTTTCTCATATCCAAGTTCAAGCCCCTAATGAATAGTTGGGCCAAAGAAATATTAGGCCCTAGCCCGAGCCCAACAGTCAAATGGACCCAAGCCAAAATCCACCTAAAGCCCATTGAAATTCTCTATAAATAGAGAAATTTCCATTCATTCTGAAGATATTTGGTGGAAGAAAGAATCGAAGCTCTGAGGAATTGAAGACAAAACTACAAAAACCTCTCAAGATGTGCAAGTTTTTATCAACCTCGAGAACATCATCTTCTGAAAGATTGAAGACTTGGAAGATCAAACTTTCATAGAATTCTAGAAGATTGAAGCTCAAATCGACTTGTAACTACAATTTTCTGAAGATCAAATATCAAGAAGTTTTAAGTTTAATTTGTATGTGAGAGAAAGAATCAAAGGAGTAATACTAGAGATTGTATCCACAACATCATATAAATCAATATACAAAGTTCAATTCCACGAATTACATTTCTCCTGAAATCTCATGTGAATAGTTTGACACACGCAAAGTGACAATCTCTACCTTTCATCTCTTTCTCTTTTTGAAGAACATCTAAAGAAATCATGACATCTGAAAGCAACACTTCCAAAGCTCTGAGCGACATCAGCAAGCGGCCAAATACTCGCAACCGCTCAAGGGAGACTCAATCATATGAGAATATGCCACCTTTTGAGGTTGCAAAAAATATTTGGAAACAGTTTTCAAAGCCACCAAAAGGTGAAATTTTAATCAAAGAAAATTCTGTGATTGACAAACACAACTCGTCCTTTGAACACTTAAGTGAGGAGATACCTCACCCAAATATAACGTTCGTTATGGTGACTGACGTGGATACAAGTGAAGATAGAATGACAGAGCTTGAAAAGAAGATCAACATGCTCATGAAGGCCGTTCAAGAAAGGAACTATGAGATTGCATCTCTCAAGAATCACATCGAGAGTCGTGATGCTGCTGAATCAAGTCACACACATACTGCCAAGAATGCTGACAAAGGAAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACTTCAATTGCATCGTTGTCTATTCAGCAGTTGTAG

mRNA sequence

ATGGAGACAAAAGCTTGTTTTATAATTTTGTCGGATTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAATGAGGAGGATAAAAGAATAATTCGGCATTTGATAGAGGATGATAAAGATGGTGACAATGATGAGGATGATATCCCTCACAGGAAAACATCTAAAGAAATCATGACATCTGAAAGCAACACTTCCAAAGCTCTGAGCGACATCAGCAAGCGGCCAAATACTCGCAACCGCTCAAGGGAGACTCAATCATATGAGAATATGCCACCTTTTGAGGTTGCAAAAAATATTTGGAAACAGTTTTCAAAGCCACCAAAAGGTGAAATTTTAATCAAAGAAAATTCTGTGATTGACAAACACAACTCGTCCTTTGAACACTTAAGTGAGGAGATACCTCACCCAAATATAACGTTCGTTATGGTGACTGACGTGGATACAAGTGAAGATAGAATGACAGAGCTTGAAAAGAAGATCAACATGCTCATGAAGGCCGTTCAAGAAAGGAACTATGAGATTGCATCTCTCAAGAATCACATCGAGAGTCGTGATGCTGCTGAATCAAGTCACACACATACTGCCAAGAATGCTGACAAAGGAAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACTTCAATTGCATCGTTGTCTATTCAGCAGTTGTAG

Coding sequence (CDS)

ATGGAGACAAAAGCTTGTTTTATAATTTTGTCGGATTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAATGAGGAGGATAAAAGAATAATTCGGCATTTGATAGAGGATGATAAAGATGGTGACAATGATGAGGATGATATCCCTCACAGGAAAACATCTAAAGAAATCATGACATCTGAAAGCAACACTTCCAAAGCTCTGAGCGACATCAGCAAGCGGCCAAATACTCGCAACCGCTCAAGGGAGACTCAATCATATGAGAATATGCCACCTTTTGAGGTTGCAAAAAATATTTGGAAACAGTTTTCAAAGCCACCAAAAGGTGAAATTTTAATCAAAGAAAATTCTGTGATTGACAAACACAACTCGTCCTTTGAACACTTAAGTGAGGAGATACCTCACCCAAATATAACGTTCGTTATGGTGACTGACGTGGATACAAGTGAAGATAGAATGACAGAGCTTGAAAAGAAGATCAACATGCTCATGAAGGCCGTTCAAGAAAGGAACTATGAGATTGCATCTCTCAAGAATCACATCGAGAGTCGTGATGCTGCTGAATCAAGTCACACACATACTGCCAAGAATGCTGACAAAGGAAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACTTCAATTGCATCGTTGTCTATTCAGCAGTTGTAG

Protein sequence

METKACFIILSDLKKKKKKKKKVKKKKKEKKKKEKKKKKKNEEDKRIIRHLIEDDKDGDNDEDDIPHRKTSKEIMTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
Homology
[Close]
BLAST of IVF0010442 vs. ExPASy TrEMBL
Match: A0A5D3DAS0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00770 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 2.0e-82
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS
Sbjct: 1   MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
           VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL
Sbjct: 61  VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 242
           KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
Sbjct: 121 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 167

[Close]
BLAST of IVF0010442 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.7e-63
Identity = 132/167 (79.04%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPF+VAKNIW+Q SKPPKG I+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENP 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
            +D+HNS  E  +EE+P PNI  VMVTDVDTSEDRM ELEKK+NMLMKAV+ER++EIA L
Sbjct: 61  AMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 242
           KNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQL 167

[Close]
BLAST of IVF0010442 vs. ExPASy TrEMBL
Match: A0A5A7U5H1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001620 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.5e-63
Identity = 132/167 (79.04%), Postives = 148/167 (88.62%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEV KNIW+Q SKPPKG I+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVVKNIWEQISKPPKGGIVIKENP 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
            ID+HNS  E  +EE+P PNI  VMVTDVDTSEDRM ELEKK+NMLMKAV+E+++EIA L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEEKDFEIALL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 242
           KNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQL 167

[Close]
BLAST of IVF0010442 vs. ExPASy TrEMBL
Match: A0A5A7SY17 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00830 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 6.0e-63
Identity = 133/167 (79.64%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEVAKNIW+Q SKPPKG I+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
            ID++NS  E  +EE+P PNI  VMVTDVDTSEDRM ELEKK+NMLMKAV+ER++EIA L
Sbjct: 61  AIDEYNSLSECSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 242
           KNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Sbjct: 121 KNHIESRDAAESSHTHTMKNANKGKAIMQESQPQNSTSIASLSVQQL 167

[Close]
BLAST of IVF0010442 vs. ExPASy TrEMBL
Match: A0A5A7UJR2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001080 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 6.0e-63
Identity = 131/167 (78.44%), Postives = 148/167 (88.62%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEVAKNIW+Q SKPPKG I+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
            ID+HNS  E L+EE+P PNI  VMVTDVDTSEDRM +LEKK+NM MK V+ER++EIA L
Sbjct: 61  AIDEHNSLSERLNEEVPQPNIMSVMVTDVDTSEDRMADLEKKVNMFMKGVEERDFEIALL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 242
           KNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+Q+L
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQKL 167

[Close]
BLAST of IVF0010442 vs. NCBI nr
Match: KAA0054002.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK20687.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (806), Expect = 1.40e-106
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS
Sbjct: 1   MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
           VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL
Sbjct: 61  VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 241
           KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
Sbjct: 121 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 167

[Close]
BLAST of IVF0010442 vs. NCBI nr
Match: KAA0050518.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (640), Expect = 2.40e-80
Identity = 132/167 (79.04%), Postives = 148/167 (88.62%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEV KNIW+Q SKPPKG I+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVVKNIWEQISKPPKGGIVIKENP 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
            ID+HNS  E  +EE+P PNI  VMVTDVDTSEDRM ELEKK+NMLMKAV+E+++EIA L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEEKDFEIALL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 241
           KNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQL 167

[Close]
BLAST of IVF0010442 vs. NCBI nr
Match: KAA0034095.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 250 bits (638), Expect = 2.02e-79
Identity = 133/167 (79.64%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEVAKNIW+Q SKPPKG I+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
            ID++NS  E  +EE+P PNI  VMVTDVDTSEDRM ELEKK+NMLMKAV+ER++EIA L
Sbjct: 61  AIDEYNSLSECSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 241
           KNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Sbjct: 121 KNHIESRDAAESSHTHTMKNANKGKAIMQESQPQNSTSIASLSVQQL 167

[Close]
BLAST of IVF0010442 vs. NCBI nr
Match: KAA0063235.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (627), Expect = 2.18e-79
Identity = 130/164 (79.27%), Postives = 145/164 (88.41%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTS+SNTSKALSDISKRP T +RSRETQSY++MPPFEVA NIW+QFSK PKG I+IKEN 
Sbjct: 1   MTSQSNTSKALSDISKRPKTHSRSRETQSYKDMPPFEVANNIWEQFSKQPKGGIIIKENL 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
           VI+KHNSSFE  +EE PHPNI  VM TD+DTS DRMTELEKKINMLMKAV+ER+YEIA L
Sbjct: 61  VINKHNSSFELSNEETPHPNIMSVMATDMDTSGDRMTELEKKINMLMKAVEERDYEIAYL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSI 238
           KNH+ES DA ESSHT+T  NADKGKA+MQE+QPQNSTSIA LSI
Sbjct: 121 KNHVESHDATESSHTYTTNNADKGKAIMQENQPQNSTSIALLSI 164

[Close]
BLAST of IVF0010442 vs. NCBI nr
Match: KAA0037432.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 249 bits (635), Expect = 1.02e-78
Identity = 133/167 (79.64%), Postives = 147/167 (88.02%), Query Frame = 0 

Query: 75  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENS 134
           MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEVAKNIW+Q SKPPKG I+IKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 135 VIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASL 194
            ID+H SS +  SEE+PHPNI  VMVT+VDTSE+RM ELEKK+NMLMK V+ER+YEIA L
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIISVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 195 KNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL 241
           KNHIESRDAAESSH HT KN DKGKAVMQESQPQNSTSIASLS+QQL
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQL 167

The following BLAST results are available for this feature:
BLAST of IVF0010442 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0010442 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DAS02.0e-82100.00Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TZU92.7e-6379.04Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... [more]
A0A5A7U5H13.5e-6379.04Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7SY176.0e-6379.64Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7UJR26.0e-6378.44Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13... [more]
BLAST of IVF0010442 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0054002.11.40e-106100.00ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK20687.1 ty3-gyp... [more]
KAA0050518.12.40e-8079.04ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0034095.12.02e-7979.64ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0063235.12.18e-7979.27ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0037432.11.02e-7879.64ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of IVF0010442 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 163..183
NoneNo IPR availableCOILSCoilCoilcoord: 10..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010442.2IVF0010442.2mRNA