IVF0010434 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAAGGAATGATTGTGTTAGAGTGCAAAACTGATGATCAGAAGGCTCTCCAAGAGGTGTATTACATTCTAAAGCTACTTAGCAACATCATAAGCCTTGGGCAAATGACAGAAGACGAAAACAAGGTACAAATGGCGGGAGATGCCATGAAAGTGTCTGACAGGAGTAGGAAGCTTTTGATGTCGAGGAAGCAAACACAAAATAGTTTGTACAAGATAACCTTGAAGATGTTCAAGCAAGTTTGCCTTCTGACAAGCCTAGAAGATCCAACATAG ATGGAAAAAGGAATGATTGTGTTAGAGTGCAAAACTGATGATCAGAAGGCTCTCCAAGAGGTGTATTACATTCTAAAGCTACTTAGCAACATCATAAGCCTTGGGCAAATGACAGAAGACGAAAACAAGGTACAAATGGCGGGAGATGCCATGAAAGTGTCTGACAGGAGTAGGAAGCTTTTGATGTCGAGGAAGCAAACACAAAATAGTTTGTACAAGATAACCTTGAAGATGTTCAAGCAAGTTTGCCTTCTGACAAGCCTAGAAGATCCAACATAG ATGGAAAAAGGAATGATTGTGTTAGAGTGCAAAACTGATGATCAGAAGGCTCTCCAAGAGGTGTATTACATTCTAAAGCTACTTAGCAACATCATAAGCCTTGGGCAAATGACAGAAGACGAAAACAAGGTACAAATGGCGGGAGATGCCATGAAAGTGTCTGACAGGAGTAGGAAGCTTTTGATGTCGAGGAAGCAAACACAAAATAGTTTGTACAAGATAACCTTGAAGATGTTCAAGCAAGTTTGCCTTCTGACAAGCCTAGAAGATCCAACATAG MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT Homology
BLAST of IVF0010434 vs. ExPASy TrEMBL
Match: A0A5A7SWA2 (Putative retroelement OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G001030 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of IVF0010434 vs. ExPASy TrEMBL
Match: A0A5A7SY21 (Retrotransposon protein, putative, unclassified OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00680 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 5.5e-25 Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of IVF0010434 vs. ExPASy TrEMBL
Match: A0A251VAV7 (Putative zinc finger, CCHC-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0090001 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14 Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of IVF0010434 vs. ExPASy TrEMBL
Match: A0A6L2JF84 (Zinc finger, CCHC-type OS=Tanacetum cinerariifolium OX=118510 GN=Tci_007225 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.2e-13 Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of IVF0010434 vs. ExPASy TrEMBL
Match: L0P2J7 (PH01B015M02.3 protein OS=Phyllostachys edulis OX=38705 GN=PH01B015M02.3 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.8e-12 Identity = 40/89 (44.94%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of IVF0010434 vs. NCBI nr
Match: KAA0033517.1 (putative retroelement [Cucumis melo var. makuwa] >TYJ95671.1 putative retroelement [Cucumis melo var. makuwa]) HSP 1 Score: 168 bits (426), Expect = 2.31e-52 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of IVF0010434 vs. NCBI nr
Match: XP_031741708.1 (uncharacterized protein LOC116403903 [Cucumis sativus]) HSP 1 Score: 140 bits (352), Expect = 1.91e-38 Identity = 74/92 (80.43%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of IVF0010434 vs. NCBI nr
Match: XP_031741713.1 (uncharacterized protein LOC116403908 [Cucumis sativus]) HSP 1 Score: 135 bits (341), Expect = 2.05e-35 Identity = 73/92 (79.35%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of IVF0010434 vs. NCBI nr
Match: KAA0035950.1 (retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa] >TYK30450.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]) HSP 1 Score: 123 bits (309), Expect = 3.40e-33 Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of IVF0010434 vs. NCBI nr
Match: XP_042450925.1 (uncharacterized protein LOC122035851 [Zingiber officinale]) HSP 1 Score: 124 bits (311), Expect = 4.22e-31 Identity = 65/92 (70.65%), Postives = 72/92 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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