IVF0010380 (gene) Melon (IVF77) v1

Overview


Name	IVF0010380
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	E3 ubiquitin-protein ligase RNF185
Location	chr08: 3074656 .. 3076079 (+)
RNA-Seq Expression	IVF0010380
Synteny	IVF0010380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCCTTTGATGTTGAATCCTTCGTATCTTCTTCTTCCTCCCATTCTATTCTACTCTCTTCTACGCCTTTCTTTTATTTCTACCTCCTGAATCCACAGATTCCTGTTTCTCACCTCAACCCTACAACTATTCTCTTTTCTATACCCCTTCTCCTTTTCACTCTTTCCCTTTCTTTTCCTCTCACAGGTCCGTTCACTCTCTTCTCTTTATTTGCCTTTCGTTTCATTCCGTTGTGATTCTGATTTGGGGCTTTCTTCTCCTCTGCCCTTTTCCTGATTTTATTCTTTCTGGCTTTATTTTCTTACAATCATCGGTTTTATTACCATCTGTGTTTTCGGATTTTTTTTTTGTTGCTTGATCTTGATATGAAGTTGTGTTGGATCTTATTTTGATTTTGTTTCGTTTTGCGATTTGTGGTGATTAATAGCTGCTGATATTTTGTGGGGTTTTACTTAGAAATGGCGAATGAGTTTGGTGAATCGACAAGTATGCCACATCGGAACCCATCTTGCTCTACTAACAGTGATACTACTAATAATGATACTGGTGATTTTGAATGCAATATTTGCTTTGAGTTAGCTCAAGACCCAATTATTACTCTTTGTGGTCATCTCTTTTGCTGGCCTTGTTTATATAGATGGCTGCATCATCACTCACAATGTCAAGAATGTCCTGTTTGTAAGGCTCTTGTTCAAGAGGAAAAGCTGGTTCCTCTTTATGGTAGGGGTAAAATACCATCCGATCCAAGATTAAATAGATATCCTGGTATTGATATTCCAAATCGTCCTGCCGGTCAAAGACCTCAAACAGCACCACCTCCTGTTCCTAATGATTTTGCAAACTATGGATTTGGATTCACTGGTGGCTTTATGCCAATGGCATCAGCAAGAATTGGCAATTTCACTTTAGCTACTGCTTTTGGTGGTCTGATCCCATCTTTATTCAATATCCAGTTTCATGGATTTCCCGATGCTACAGTTTATGGAACTACTTCTGGTTACCCTTATGCATTCAACACCTTTCATGGAGGTCATGGTCACCATTTTCCGCAACCGTCCACTCGAGGTCAGCATGCTGATAACGTACTGAAAAACCTTCTTTTACTTGTTGGTGTCTTTGTAATTCTTGCCTTGCTCTGGTGGTAAAAGATAATGTTTTGACTTCAATGGAAATTACACAAGTGTAGAGATTTTCATTTAGTGCCTTATGAAGTAGGTTAGCTGATACTGTGGTCATATATATGTGTGTGTGTGTATGCTCGATAAAACTTACTGTGAGTTTACCATCAATTCGTGTTATGGATGTCCCAAAGGACTTCTGGTTGTTGCTTTCTTTTGCACAAACCAGCTCTCATATTCACATCTTTCTACTGCAAACTTCTTTATCCAACCGTAATAAAGTGAAAATTTTGCTATTTTGTTCAA

mRNA sequence

ATCCCTTTGATGTTGAATCCTTCGTATCTTCTTCTTCCTCCCATTCTATTCTACTCTCTTCTACGCCTTTCTTTTATTTCTACCTCCTGAATCCACAGATTCCTGTTTCTCACCTCAACCCTACAACTATTCTCTTTTCTATACCCCTTCTCCTTTTCACTCTTTCCCTTTCTTTTCCTCTCACAGAAATGGCGAATGAGTTTGGTGAATCGACAAGTATGCCACATCGGAACCCATCTTGCTCTACTAACAGTGATACTACTAATAATGATACTGGTGATTTTGAATGCAATATTTGCTTTGAGTTAGCTCAAGACCCAATTATTACTCTTTGTGGTCATCTCTTTTGCTGGCCTTGTTTATATAGATGGCTGCATCATCACTCACAATGTCAAGAATGTCCTGTTTGTAAGGCTCTTGTTCAAGAGGAAAAGCTGGTTCCTCTTTATGGTAGGGGTAAAATACCATCCGATCCAAGATTAAATAGATATCCTGGTATTGATATTCCAAATCGTCCTGCCGGTCAAAGACCTCAAACAGCACCACCTCCTGTTCCTAATGATTTTGCAAACTATGGATTTGGATTCACTGGTGGCTTTATGCCAATGGCATCAGCAAGAATTGGCAATTTCACTTTAGCTACTGCTTTTGGTGGTCTGATCCCATCTTTATTCAATATCCAGTTTCATGGATTTCCCGATGCTACAGTTTATGGAACTACTTCTGGTTACCCTTATGCATTCAACACCTTTCATGGAGGTCATGGTCACCATTTTCCGCAACCGTCCACTCGAGGTCAGCATGCTGATAACGTACTGAAAAACCTTCTTTTACTTGTTGGTGTCTTTGTAATTCTTGCCTTGCTCTGGTGGTAAAAGATAATGTTTTGACTTCAATGGAAATTACACAAGTGTAGAGATTTTCATTTAGTGCCTTATGAAGTAGGTTAGCTGATACTGTGGTCATATATATGTGTGTGTGTGTATGCTCGATAAAACTTACTGTGAGTTTACCATCAATTCGTGTTATGGATGTCCCAAAGGACTTCTGGTTGTTGCTTTCTTTTGCACAAACCAGCTCTCATATTCACATCTTTCTACTGCAAACTTCTTTATCCAACCGTAATAAAGTGAAAATTTTGCTATTTTGTTCAA

Coding sequence (CDS)

ATGGCGAATGAGTTTGGTGAATCGACAAGTATGCCACATCGGAACCCATCTTGCTCTACTAACAGTGATACTACTAATAATGATACTGGTGATTTTGAATGCAATATTTGCTTTGAGTTAGCTCAAGACCCAATTATTACTCTTTGTGGTCATCTCTTTTGCTGGCCTTGTTTATATAGATGGCTGCATCATCACTCACAATGTCAAGAATGTCCTGTTTGTAAGGCTCTTGTTCAAGAGGAAAAGCTGGTTCCTCTTTATGGTAGGGGTAAAATACCATCCGATCCAAGATTAAATAGATATCCTGGTATTGATATTCCAAATCGTCCTGCCGGTCAAAGACCTCAAACAGCACCACCTCCTGTTCCTAATGATTTTGCAAACTATGGATTTGGATTCACTGGTGGCTTTATGCCAATGGCATCAGCAAGAATTGGCAATTTCACTTTAGCTACTGCTTTTGGTGGTCTGATCCCATCTTTATTCAATATCCAGTTTCATGGATTTCCCGATGCTACAGTTTATGGAACTACTTCTGGTTACCCTTATGCATTCAACACCTTTCATGGAGGTCATGGTCACCATTTTCCGCAACCGTCCACTCGAGGTCAGCATGCTGATAACGTACTGAAAAACCTTCTTTTACTTGTTGGTGTCTTTGTAATTCTTGCCTTGCTCTGGTGGTAA

Protein sequence

MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPPPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSGYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW

Homology

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BLAST of IVF0010380 vs. ExPASy Swiss-Prot
Match: Q09463 (E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 81/245 (33.06%), Postives = 115/245 (46.94%), Query Frame = 0


Query: 9   TSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQC 68
           T  P   P+ S+N D    ++  FECNIC + A+D +++LCGHLFCWPCL +WL      
Sbjct: 5   TKAPSEEPTSSSNKD----ESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNN 64

Query: 69  QECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPPPVPNDFAN 128
           Q CPVCK+ +   K+VP+YGRG   SDPR        +P RP GQR +    P P  FA 
Sbjct: 65  QVCPVCKSAIDGNKVVPIYGRGGDSSDPRKK------VPPRPKGQRSE----PPPQSFAG 124

Query: 129 YGFGFTGGFMPMASARIG-NFTLATAFGGLIPSLFNIQF---------------HGFPDA 188
           + +G  GG M      +  +F + T   GL P +F + F               +G   A
Sbjct: 125 FNWGGDGGMMGGGGPNVHFSFGIGTV-NGLFPLMFMLPFIQGIFPLSFVASFFGNGNQGA 184

Query: 189 TVYGTTSG---------YPYAFNTFHGGHGH-HFPQPSTRGQHADNVLKNLLLLVGVFVI 228
              G  +G         + +     HG  GH     P +R    +  L N+   +G F++
Sbjct: 185 AAAGGGNGGGNDGNDGTHAHTHGHTHGPRGHGESAAPGSRMAQEEEYLSNIFKYIGFFML 234

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BLAST of IVF0010380 vs. ExPASy Swiss-Prot
Match: Q5ZIR9 (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 76/174 (43.68%), Postives = 94/174 (54.02%), Query Frame = 0


Query: 7   ESTSMPHRNPSCSTN--SDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHH 66
           +S+S    + S S+N   D TN D   FECNIC + A+D +I+LCGHLFCWPCL++WL  
Sbjct: 13  KSSSTGGTSGSSSSNGAGDNTNQD-NTFECNICLDTAKDAVISLCGHLFCWPCLHQWLET 72

Query: 67  HSQCQECPVCKALVQEEKLVPLYGRGKI-PSDPRLNRYPGIDIPNRPAGQRPQTAPPPVP 126
               Q CPVCKA +  +K++PLYGRG     DPR         P RP GQRP+   P   
Sbjct: 73  RPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQGQRPE---PENR 132

Query: 127 NDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGT 178
             F  +GFG  GGF    S  IG F       G+  + FNI   G P   V GT
Sbjct: 133 GGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAVPGT 167

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BLAST of IVF0010380 vs. ExPASy Swiss-Prot
Match: Q91YT2 (E3 ubiquitin-protein ligase RNF185 OS=Mus musculus OX=10090 GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 75/183 (40.98%), Postives = 95/183 (51.91%), Query Frame = 0


Query: 11  MPHRNPSCSTNSDTTN--------NDTGD-------FECNICFELAQDPIITLCGHLFCW 70
           M  + PS S +++ +N        N TG+       FECNIC + A+D +I+LCGHLFCW
Sbjct: 1   MASKGPSASASTENSNAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCW 60

Query: 71  PCLYRWLHHHSQCQECPVCKALVQEEKLVPLYGRGKI-PSDPRLNRYPGIDIPNRPAGQR 130
           PCL++WL      Q CPVCKA +  +K++PLYGRG     DPR         P RP GQR
Sbjct: 61  PCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQGQR 120

Query: 131 PQTAPPPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATV 178
           P+   P     F  +GFG  GGF    S  IG F       G+  + FNI   G P   V
Sbjct: 121 PE---PENRGGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAV 165

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BLAST of IVF0010380 vs. ExPASy Swiss-Prot
Match: Q5RFK9 (E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii OX=9601 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.0e-24
Identity = 75/183 (40.98%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 1   MANEFGESTSMPHRN----PSCSTN-SDTTNNDTGDFECNICFELAQDPIITLCGHLFCW 60
           MA++   ++S P  +    PS S+N +  +      FECNIC + A+D +I+LCGHLFCW
Sbjct: 1   MASKGPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCW 60

Query: 61  PCLYRWLHHHSQCQECPVCKALVQEEKLVPLYGRGKI-PSDPRLNRYPGIDIPNRPAGQR 120
           PCL++WL      Q CPVCKA +  +K++PLYGRG     DPR         P RP GQR
Sbjct: 61  PCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQGQR 120

Query: 121 PQTAPPPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATV 178
           P+   P     F  +GFG  GGF    S  IG F       G+  + FNI   G P   V
Sbjct: 121 PE---PENRGGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAV 165

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BLAST of IVF0010380 vs. ExPASy Swiss-Prot
Match: Q568Y3 (E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus OX=10116 GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.0e-24
Identity = 76/180 (42.22%), Postives = 93/180 (51.67%), Query Frame = 0


Query: 6   GESTSMPHRNPSCSTNSDTTNNDTGD-------FECNICFELAQDPIITLCGHLFCWPCL 65
           G S S    N S    S ++N  TG+       FECNIC + A+D +I+LCGHLFCWPCL
Sbjct: 5   GPSASASTENSSAGGPSGSSNG-TGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCL 64

Query: 66  YRWLHHHSQCQECPVCKALVQEEKLVPLYGRGKI-PSDPRLNRYPGIDIPNRPAGQRPQT 125
           ++WL      Q CPVCKA +  +K++PLYGRG     DPR         P RP GQRP+ 
Sbjct: 65  HQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQGQRPE- 124

Query: 126 APPPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGT 178
             P     F  +GFG  GGF    S  IG F       G+  + FNI   G P   V GT
Sbjct: 125 --PENRGGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAVPGT 165

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BLAST of IVF0010380 vs. ExPASy TrEMBL
Match: A0A5D3CNC7 (E3 ubiquitin-protein ligase RNF185 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005460 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.2e-135
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60
           MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60

Query: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120
           WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120

Query: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180
           PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]

BLAST of IVF0010380 vs. ExPASy TrEMBL
Match: A0A1S3B021 (E3 ubiquitin-protein ligase RNF185 OS=Cucumis melo OX=3656 GN=LOC103484707 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 4.2e-135
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60
           MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60

Query: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120
           WLHHHSQCQECPVCKAL+QEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120

Query: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180
           PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

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BLAST of IVF0010380 vs. ExPASy TrEMBL
Match: A0A0A0KG01 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487690 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.4e-130
Identity = 221/229 (96.51%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTT-NNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTSMPH+NPSCSTNSDTT NNDTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGKIPSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120

Query: 121 PPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PPVPN+F NYGFGF GGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229

[Close]

BLAST of IVF0010380 vs. ExPASy TrEMBL
Match: A0A6J1IMG5 (E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita maxima OX=3661 GN=LOC111478748 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 3.8e-128
Identity = 216/228 (94.74%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60
           MANEFGESTS+PH+NPS S+NSD TNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60

Query: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120
           WLHHHSQCQECPVCKALVQEEKLVPLYGRGK PSDPRLNRYPGIDIPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120

Query: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180
           P  NDFANYGFGFTGGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           YPYAFNTFHGGHGHHFPQP +RGQHADNVLKNL LLVGVFVILALLWW
Sbjct: 181 YPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 228

[Close]

BLAST of IVF0010380 vs. ExPASy TrEMBL
Match: A0A6J1GCG3 (E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita moschata OX=3662 GN=LOC111452948 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 3.8e-128
Identity = 216/228 (94.74%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60
           MANEFGESTS+PH+NPS S+NSD TNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60

Query: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120
           WLHHHSQCQECPVCKALVQEEKLVPLYGRGK PSDPRLNRYPGIDIPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120

Query: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180
           P  NDFANYGFGFTGGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           YPYAFNTFHGGHGHHFPQP +RGQHADNVLKNL LLVGVFVILALLWW
Sbjct: 181 YPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 228

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BLAST of IVF0010380 vs. NCBI nr
Match: TYK12950.1 (E3 ubiquitin-protein ligase RNF185 [Cucumis melo var. makuwa])

HSP 1 Score: 486 bits (1250), Expect = 1.56e-173
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60
           MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60

Query: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120
           WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120

Query: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180
           PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228
           YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]

BLAST of IVF0010380 vs. NCBI nr
Match: XP_008440158.1 (PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis melo] >XP_008440160.1 PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis melo])

HSP 1 Score: 485 bits (1249), Expect = 2.22e-173
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60
           MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60

Query: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120
           WLHHHSQCQECPVCKAL+QEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120

Query: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180
           PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228
           YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]

BLAST of IVF0010380 vs. NCBI nr
Match: XP_038881107.1 (E3 ubiquitin-protein ligase RNF185-like [Benincasa hispida])

HSP 1 Score: 470 bits (1210), Expect = 1.97e-167
Identity = 221/228 (96.93%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60
           MANEFGESTS+PH+N S STNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MANEFGESTSVPHQNSSWSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60

Query: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120
           WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIP+RPAGQRPQTAPP
Sbjct: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPSRPAGQRPQTAPP 120

Query: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180
           PVPNDF NYGFGFTGGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PVPNDFPNYGFGFTGGFMPMATARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228
           YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]

BLAST of IVF0010380 vs. NCBI nr
Match: XP_004141954.1 (E3 ubiquitin-protein ligase RNF185 [Cucumis sativus] >KGN48448.1 hypothetical protein Csa_003683 [Cucumis sativus])

HSP 1 Score: 470 bits (1210), Expect = 2.04e-167
Identity = 221/229 (96.51%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTSMPH+NPSCSTNSDTTNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGKIPSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120

Query: 121 PPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PPVPN+F NYGFGF GGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228
           GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229

[Close]

BLAST of IVF0010380 vs. NCBI nr
Match: XP_022949606.1 (E3 ubiquitin-protein ligase RNF185-like [Cucurbita moschata] >XP_022978947.1 E3 ubiquitin-protein ligase RNF185-like [Cucurbita maxima] >XP_023543222.1 E3 ubiquitin-protein ligase RNF185-like [Cucurbita pepo subsp. pepo] >KAG7034387.1 RING finger protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 462 bits (1189), Expect = 3.13e-164
Identity = 216/228 (94.74%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60
           MANEFGESTS+PH+NPS S+NSD TNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60

Query: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120
           WLHHHSQCQECPVCKALVQEEKLVPLYGRGK PSDPRLNRYPGIDIPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120

Query: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180
           P  NDFANYGFGFTGGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228
           YPYAFNTFHGGHGHHFPQP +RGQHADNVLKNL LLVGVFVILALLWW
Sbjct: 181 YPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 228

[Close]

BLAST of IVF0010380 vs. TAIR 10
Match: AT2G23780.1 (RING/U-box superfamily protein )

HSP 1 Score: 275.4 bits (703), Expect = 4.1e-74
Identity = 141/229 (61.57%), Postives = 166/229 (72.49%), Query Frame = 0


Query: 11  MPHRNPSCSTNSDTTNNDT----GDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHS 70
           M +   S ST+   +NNDT    GDFECNICFELAQDPI+TLCGHLFCWPCLYRWLHHHS
Sbjct: 1   MVNGESSTSTSYSDSNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHS 60

Query: 71  QCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQT-APPPVP-- 130
             QECPVCKA+VQ++KLVPLYGRGK  +DPR  RYPG+ IPNRP GQRP+T APPP P  
Sbjct: 61  HSQECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLRIPNRPTGQRPETAAPPPQPEA 120

Query: 131 -NDFANYGFGFTGGFMP-MASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSGY 190
            ++F NYG G  GG MP MA+ R GNF++   FGGL+PSLFN QFHGF DAT+YG+T GY
Sbjct: 121 ASNFFNYGIGLMGGIMPMMATTRFGNFSM--GFGGLLPSLFNFQFHGFHDATLYGSTPGY 180

Query: 191 PYA--FNTFHGGHGHHFPQPSTR-GQHADNVLKNLLLLVGVFVILALLW 228
           PY    N F G       +P  R G  +D  LKN+L  VG+ V++ L+W
Sbjct: 181 PYGGYHNGFRGVPPRGQERPMARGGNQSDAFLKNILFFVGICVVIFLIW 227

[Close]

BLAST of IVF0010380 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 272.3 bits (695), Expect = 3.5e-73
Identity = 134/219 (61.19%), Postives = 170/219 (77.63%), Query Frame = 0


Query: 16  PSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQCQECPVCK 75
           PSCS+ +DT NND+ +FECNIC +LAQDPI+TLCGHLFCWPCLY+WLH HSQ ++CPVCK
Sbjct: 5   PSCSSGNDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCK 64

Query: 76  ALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPPPVPN-DFA-NYGF-G 135
           A+++E++LVPLYGRGK  +DPR    PG+++PNRP+GQRP+TA PP PN  FA ++GF G
Sbjct: 65  AVIEEDRLVPLYGRGKSSADPRSKSIPGLEVPNRPSGQRPETAQPPDPNHGFAHHHGFGG 124

Query: 136 FTGGF-MPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYG--TTSGYPYAF-NTF 195
           F GGF  PMASAR GN TL+ AFGGLIPSLFN+ FHGFPDA +YG   + G+P+ F N F
Sbjct: 125 FMGGFAAPMASARFGNVTLSAAFGGLIPSLFNLHFHGFPDAAMYGAAASGGFPHGFSNPF 184

Query: 196 HGGHG--HHFPQPSTRGQHADNVLKNLLLLVGVFVILAL 226
           HGGH   H + + + R    D+ L+ LLL+V V V+ +L
Sbjct: 185 HGGHSHMHSYQRHTGRQGQQDHHLRILLLIVFVVVVFSL 223

[Close]

BLAST of IVF0010380 vs. TAIR 10
Match: AT1G74990.1 (RING/U-box superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-34
Identity = 72/140 (51.43%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 15  NPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQCQECPVC 74
           N   +   D +NN    F CNIC ELA++PI+TLCGHLFCWPCLY+WLH+HS+   CPVC
Sbjct: 4   NTITNEEDDASNN----FGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVC 63

Query: 75  KALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPPPVPNDFANYGFGFT 134
           KALV+E+ LVPLYG GK  SDPR     G+ +PNRPA  R +TA P +  +  ++G  F 
Sbjct: 64  KALVKEDTLVPLYGMGKPSSDPRSKLNSGVTVPNRPAATRTETARPRL--EQRHHGSSFF 123

Query: 135 GGFMPMAS----ARIGNFTL 151
           GG    A+     R  NF L
Sbjct: 124 GGHSSFAAMPTGLRFSNFLL 137

[Close]

BLAST of IVF0010380 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 23  DTTNNDT-GDFECNICFELAQDPIITLCGHLFCWPCLYRWLH-------------HHSQC 82
           DTT  D+ GDF+CNIC +  +DP++TLCGHLFCWPC+++W +             H  + 
Sbjct: 9   DTTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREP 68

Query: 83  QECPVCKALVQEEKLVPLYGRG-KIPSDPRLNRYPGIDIPNRPAG 113
            +CPVCK+ V E  LVP+YGRG K P         G ++P+RP G
Sbjct: 69  PKCPVCKSDVSEATLVPIYGRGQKAPQS-------GSNVPSRPTG 106

[Close]

BLAST of IVF0010380 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-20
Identity = 46/96 (47.92%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 27  NDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHH-------SQCQECPVCKALVQ 86
           N++G F+CNIC + A DP++TLCGHLFCWPC+Y+WLH              CPVCK+ + 
Sbjct: 37  NESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNIT 96

Query: 87  EEKLVPLYGRG-KIPSD---PRLNRYPGIDIPNRPA 112
              LVPLYGRG   PS     +       DIP RPA
Sbjct: 97  ITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPA 132

The following BLAST results are available for this feature:

BLAST of IVF0010380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09463	2.2e-27	33.06	E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1	[more]
Q5ZIR9	1.0e-24	43.68	E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1	[more]
Q91YT2	1.0e-24	40.98	E3 ubiquitin-protein ligase RNF185 OS=Mus musculus OX=10090 GN=Rnf185 PE=2 SV=1	[more]
Q5RFK9	5.0e-24	40.98	E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii OX=9601 GN=RNF185 PE=2 SV=1	[more]
Q568Y3	5.0e-24	42.22	E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus OX=10116 GN=Rnf185 PE=2 ...	[more]

BLAST of IVF0010380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CNC7	3.2e-135	100.00	E3 ubiquitin-protein ligase RNF185 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B021	4.2e-135	99.56	E3 ubiquitin-protein ligase RNF185 OS=Cucumis melo OX=3656 GN=LOC103484707 PE=4 ...	[more]
A0A0A0KG01	1.4e-130	96.51	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487690 P...	[more]
A0A6J1IMG5	3.8e-128	94.74	E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita maxima OX=3661 GN=LOC111478...	[more]
A0A6J1GCG3	3.8e-128	94.74	E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of IVF0010380 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK12950.1	1.56e-173	100.00	E3 ubiquitin-protein ligase RNF185 [Cucumis melo var. makuwa]	[more]
XP_008440158.1	2.22e-173	99.56	PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis melo] >XP_008440160.1 PRE...	[more]
XP_038881107.1	1.97e-167	96.93	E3 ubiquitin-protein ligase RNF185-like [Benincasa hispida]	[more]
XP_004141954.1	2.04e-167	96.51	E3 ubiquitin-protein ligase RNF185 [Cucumis sativus] >KGN48448.1 hypothetical pr...	[more]
XP_022949606.1	3.13e-164	94.74	E3 ubiquitin-protein ligase RNF185-like [Cucurbita moschata] >XP_022978947.1 E3 ...	[more]

BLAST of IVF0010380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23780.1	4.1e-74	61.57	RING/U-box superfamily protein	[more]
AT1G19310.1	3.5e-73	61.19	RING/U-box superfamily protein	[more]
AT1G74990.1	1.4e-34	51.43	RING/U-box superfamily protein	[more]
AT4G28270.1	1.5e-20	44.76	RING membrane-anchor 2	[more]
AT4G27470.1	3.4e-20	47.92	RING membrane-anchor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 34..74 e-value: 9.6E-7 score: 38.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 34..75 score: 13.212175
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 3..88 e-value: 8.1E-17 score: 62.9
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 33..74 e-value: 9.2E-8 score: 31.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR12313:SF47	RING ZINC FINGER PROTEIN-RELATED	coord: 2..227
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 32..76 e-value: 1.05109E-29 score: 103.153
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 29..87
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 2..227
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 49..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010380.4	IVF0010380.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity