IVF0010307 (gene) Melon (IVF77) v1

Overview


Name	IVF0010307
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein of unknown function (DUF 3339)
Location	chr07: 22492461 .. 22492951 (+)
RNA-Seq Expression	IVF0010307
Synteny	IVF0010307

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAAAGGGCAAAGCTAAGCTAAGCTAAGAAGAAGAATATCAATGGCGGATTGGGGGCCAGTGGTTATAGCACTGATTCTGTTCATTCTTCTATCTCCAGGGCTTCTCTTTCAGGTCCACGGTGCCGAAAAGTTCATCCAGTTCGGAAACTTCGAAACAAGTGCCACCTCCATTTTTCTTCATTCCCTCATCTTCTTCGCCCTCCTATGTCTCTTCACTCTCGTCCTTCATCCTCATATCTACATCTGATCAATCTCATGTAATATCATTTTCATCTCATCCCAGGTATATAAACTAAACTAAGTTCCATATACCGTATCGATTTTTCTTTCTCGTTTCGTTTAAAAAGAAATCTCTAATGGAGTTGTTGTAGTAGCTTGATTGTGTTTGCATTATTCACTCCTCTCGTTCACGTTTGAACTTTTCATTTGATCTCAGTTGTATATCGGTTAATTTTTTCTTTAAAGTTGGTACCGACGTCGAATTTCAC

mRNA sequence

GAGAAAAGGGCAAAGCTAAGCTAAGCTAAGAAGAAGAATATCAATGGCGGATTGGGGGCCAGTGGTTATAGCACTGATTCTGTTCATTCTTCTATCTCCAGGGCTTCTCTTTCAGGTCCACGGTGCCGAAAAGTTCATCCAGTTCGGAAACTTCGAAACAAGTGCCACCTCCATTTTTCTTCATTCCCTCATCTTCTTCGCCCTCCTATGTCTCTTCACTCTCGTCCTTCATCCTCATATCTACATCTGATCAATCTCATGTAATATCATTTTCATCTCATCCCAGGTATATAAACTAAACTAAGTTCCATATACCGTATCGATTTTTCTTTCTCGTTTCGTTTAAAAAGAAATCTCTAATGGAGTTGTTGTAGTAGCTTGATTGTGTTTGCATTATTCACTCCTCTCGTTCACGTTTGAACTTTTCATTTGATCTCAGTTGTATATCGGTTAATTTTTTCTTTAAAGTTGGTACCGACGTCGAATTTCAC

Coding sequence (CDS)

ATGGCGGATTGGGGGCCAGTGGTTATAGCACTGATTCTGTTCATTCTTCTATCTCCAGGGCTTCTCTTTCAGGTCCACGGTGCCGAAAAGTTCATCCAGTTCGGAAACTTCGAAACAAGTGCCACCTCCATTTTTCTTCATTCCCTCATCTTCTTCGCCCTCCTATGTCTCTTCACTCTCGTCCTTCATCCTCATATCTACATCTGA

Protein sequence

MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTLVLHPHIYI

Homology

[Close]

BLAST of IVF0010307 vs. ExPASy TrEMBL
Match: A0A6J1IAL9 (uncharacterized protein LOC111470766 OS=Cucurbita maxima OX=3661 GN=LOC111470766 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.0e-25
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPV++A+ILFILLSPGLLFQVHGA+KFIQFGNFETSATSIFLHSLIFFAL CLFTL
Sbjct: 12 MADWGPVLVAVILFILLSPGLLFQVHGADKFIQFGNFETSATSIFLHSLIFFALFCLFTL 71

Query: 61 VLHPHIYI 69
          VLH HIY+
Sbjct: 72 VLHLHIYV 79

[Close]

BLAST of IVF0010307 vs. ExPASy TrEMBL
Match: A0A6J1F2V4 (uncharacterized protein LOC111439164 OS=Cucurbita moschata OX=3662 GN=LOC111439164 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.0e-25
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPV++A+ILFILLSPGLLFQVHGA+KFIQFGNFETSATSIFLHSLIFFAL CLFTL
Sbjct: 1  MADWGPVLVAVILFILLSPGLLFQVHGADKFIQFGNFETSATSIFLHSLIFFALFCLFTL 60

Query: 61 VLHPHIYI 69
          VLH HIY+
Sbjct: 61 VLHLHIYV 68

[Close]

BLAST of IVF0010307 vs. ExPASy TrEMBL
Match: A0A6J1I7P7 (uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.4e-19
Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPV +A++LF+LLSPGLLFQV G   FIQFGNF+TS  SIF+HSLIFFAL+CLFT 
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VLHPHIYI 69
          VL  HIY+
Sbjct: 61 VLQLHIYL 68

[Close]

BLAST of IVF0010307 vs. ExPASy TrEMBL
Match: A0A6J1EXQ9 (uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC111439163 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.4e-19
Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPV +A++LF+LLSPGLLFQV G   FIQFGNF+TS  SIF+HSLIFFAL+CLFT 
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VLHPHIYI 69
          VL  HIY+
Sbjct: 61 VLQLHIYL 68

[Close]

BLAST of IVF0010307 vs. ExPASy TrEMBL
Match: A0A6J1CVS1 (uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014687 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-18
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPV +A++LF+LLSPGLLFQV G  +F++FGNF TS  SIF+HSLIFFALLCLFT 
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTF 60

Query: 61 VLHPHIYI 69
          V+  HIYI
Sbjct: 61 VVQLHIYI 68

[Close]

BLAST of IVF0010307 vs. NCBI nr
Match: XP_004152116.1 (uncharacterized protein LOC101215245 [Cucumis sativus])

HSP 1 Score: 127 bits (318), Expect = 1.44e-36
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPVV+ALILFILLSPGLLFQVHGAEKFI FGNFETSATSIFLHSLIFFAL CLFTL
Sbjct: 1  MADWGPVVVALILFILLSPGLLFQVHGAEKFIVFGNFETSATSIFLHSLIFFALFCLFTL 60

Query: 61 VLHPHIYI 68
          VLHPHIYI
Sbjct: 61 VLHPHIYI 68

[Close]

BLAST of IVF0010307 vs. NCBI nr
Match: XP_022932695.1 (uncharacterized protein LOC111439164 [Cucurbita moschata] >XP_023539088.1 uncharacterized protein LOC111799840 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122 bits (305), Expect = 1.39e-34
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPV++A+ILFILLSPGLLFQVHGA+KFIQFGNFETSATSIFLHSLIFFAL CLFTL
Sbjct: 1  MADWGPVLVAVILFILLSPGLLFQVHGADKFIQFGNFETSATSIFLHSLIFFALFCLFTL 60

Query: 61 VLHPHIYI 68
          VLH HIY+
Sbjct: 61 VLHLHIYV 68

[Close]

BLAST of IVF0010307 vs. NCBI nr
Match: XP_022972134.1 (uncharacterized protein LOC111470766 [Cucurbita maxima])

HSP 1 Score: 122 bits (305), Expect = 1.89e-34
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPV++A+ILFILLSPGLLFQVHGA+KFIQFGNFETSATSIFLHSLIFFAL CLFTL
Sbjct: 12 MADWGPVLVAVILFILLSPGLLFQVHGADKFIQFGNFETSATSIFLHSLIFFALFCLFTL 71

Query: 61 VLHPHIYI 68
          VLH HIY+
Sbjct: 72 VLHLHIYV 79

[Close]

BLAST of IVF0010307 vs. NCBI nr
Match: XP_038907108.1 (uncharacterized protein LOC120092931 [Benincasa hispida])

HSP 1 Score: 120 bits (302), Expect = 3.99e-34
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPV +A+ILFILLSPGLLFQVHGAEKFI+FGNFETSATSIFLHSLIFFAL CLFTL
Sbjct: 1  MADWGPVFVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60

Query: 61 VLHPHIYI 68
          V+H HIYI
Sbjct: 61 VIHLHIYI 68

[Close]

BLAST of IVF0010307 vs. NCBI nr
Match: KAG7018460.1 (hypothetical protein SDJN02_20328, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119 bits (298), Expect = 1.63e-33
Identity = 60/68 (88.24%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPVV+A++LFILLSPGL+ QVHGAEKFI+FGNFETSATSIFLHSLIFFAL CLFTL
Sbjct: 1  MADWGPVVVAVVLFILLSPGLVVQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60

Query: 61 VLHPHIYI 68
          VLH HIYI
Sbjct: 61 VLHLHIYI 68

[Close]

BLAST of IVF0010307 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 90.9 bits (224), Expect = 4.3e-19
Identity = 39/68 (57.35%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          M+DWGPV++ +ILF++L+PGLLFQ+ G +K+++FGNF+TSA S+ +HSL++F+L+C+F L
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 VLHPHIYI 69
           L  HIYI
Sbjct: 61 ALKIHIYI 68

[Close]

BLAST of IVF0010307 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 83.2 bits (204), Expect = 8.9e-17
Identity = 37/67 (55.22%), Postives = 54/67 (80.60%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPV+IA+ILF++LSPGLLFQ+    + ++FGN +TS  SI +H++IFF L+ +FT+
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 VLHPHIY 68
           ++ HIY
Sbjct: 61 AINVHIY 67

[Close]

BLAST of IVF0010307 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-16
Identity = 37/67 (55.22%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          MADWGPVV+A+ILF+LL+PGLLFQ+    + ++FGN +TS  SI +H++IFF L+ +FT+
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 VLHPHIY 68
           +  HIY
Sbjct: 61 AIRLHIY 67

[Close]

BLAST of IVF0010307 vs. TAIR 10
Match: AT3G01950.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-14
Identity = 34/65 (52.31%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 3  DWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTLVL 62
          DWGPV++++I FI+LSPG+LFQ+ G  K ++FG F+TS  SI +H+L+FFA + +  + L
Sbjct: 4  DWGPVLMSVIFFIVLSPGVLFQLPGKSKAVEFGGFQTSGPSIVIHTLLFFAFITISLIAL 63

Query: 63 HPHIY 68
          H HIY
Sbjct: 64 HIHIY 68

[Close]

BLAST of IVF0010307 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 4.1e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 1  MADWGPVVIALILFILLSPGLLFQVHGAEKFIQFGNFETSATSIFLHSLIFFALLCLFTL 60
          M DWGPV +A+ LF+LL+PGLL QV G  + ++FG F+TS  S+ +H+LI+F L+C+  L
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 VLHPHI 67
           L  HI
Sbjct: 61 ALQIHI 66

The following BLAST results are available for this feature:

BLAST of IVF0010307 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0010307 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAL9	4.0e-25	89.71	uncharacterized protein LOC111470766 OS=Cucurbita maxima OX=3661 GN=LOC111470766...	[more]
A0A6J1F2V4	4.0e-25	89.71	uncharacterized protein LOC111439164 OS=Cucurbita moschata OX=3662 GN=LOC1114391...	[more]
A0A6J1I7P7	7.4e-19	73.53	uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767...	[more]
A0A6J1EXQ9	7.4e-19	73.53	uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC1114391...	[more]
A0A6J1CVS1	1.6e-18	72.06	uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of IVF0010307 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152116.1	1.44e-36	95.59	uncharacterized protein LOC101215245 [Cucumis sativus]	[more]
XP_022932695.1	1.39e-34	89.71	uncharacterized protein LOC111439164 [Cucurbita moschata] >XP_023539088.1 unchar...	[more]
XP_022972134.1	1.89e-34	89.71	uncharacterized protein LOC111470766 [Cucurbita maxima]	[more]
XP_038907108.1	3.99e-34	89.71	uncharacterized protein LOC120092931 [Benincasa hispida]	[more]
KAG7018460.1	1.63e-33	88.24	hypothetical protein SDJN02_20328, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of IVF0010307 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08391.1	4.3e-19	57.35	Protein of unknown function (DUF 3339)	[more]
AT5G63500.1	8.9e-17	55.22	Protein of unknown function (DUF 3339)	[more]
AT3G48660.1	1.2e-16	55.22	Protein of unknown function (DUF 3339)	[more]
AT3G01950.1	1.9e-14	52.31	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	4.1e-14	51.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..67 e-value: 6.3E-29 score: 100.0
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 1..68
None	No IPR available	PANTHER	PTHR33128:SF55	PROTEIN, PUTATIVE (DUF 3339)-RELATED	coord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010307.1	IVF0010307.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane