IVF0010301 (gene) Melon (IVF77) v1

Overview


Name	IVF0010301
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr03: 17127411 .. 17127856 (+)
RNA-Seq Expression	IVF0010301
Synteny	IVF0010301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAACACTCTCACGCTTCTAAATTATTCATCTATCTATCTAAAATTGCTTCCTTTTAAGCCATGGGAGGCCACAAGCACAAGAAATCTCATTCATCTTTTTCTTTCTTTAGTTTTTTCAAATCCAAATGGAGCAAAAAAGAAGACCATTATGACCACGGTGGCTCATGGCTAGATGATAAGTCGAGATCGGGCAAGGTGTGGCCAAGCGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCCGGTATTGATCGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAATCGTGTTTTCGAATCCGAGCGTCAAACCGTCACTATACCTACCAATGTGTAAATAATGTGTAAATAATTTTTTTTTTTGCATATAGTATTAGTTCATTAAACTTAGCTTTGTTTAATTAGATGATACCCTAGAAGAAAACTTTATATCAACAC

mRNA sequence

CATCAACACTCTCACGCTTCTAAATTATTCATCTATCTATCTAAAATTGCTTCCTTTTAAGCCATGGGAGGCCACAAGCACAAGAAATCTCATTCATCTTTTTCTTTCTTTAGTTTTTTCAAATCCAAATGGAGCAAAAAAGAAGACCATTATGACCACGGTGGCTCATGGCTAGATGATAAGTCGAGATCGGGCAAGGTGTGGCCAAGCGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCCGGTATTGATCGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAATCGTGTTTTCGAATCCGAGCGTCAAACCGTCACTATACCTACCAATGTGTAAATAATGTGTAAATAATTTTTTTTTTTGCATATAGTATTAGTTCATTAAACTTAGCTTTGTTTAATTAGATGATACCCTAGAAGAAAACTTTATATCAACAC

Coding sequence (CDS)

ATGGGAGGCCACAAGCACAAGAAATCTCATTCATCTTTTTCTTTCTTTAGTTTTTTCAAATCCAAATGGAGCAAAAAAGAAGACCATTATGACCACGGTGGCTCATGGCTAGATGATAAGTCGAGATCGGGCAAGGTGTGGCCAAGCGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCCGGTATTGATCGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAATCGTGTTTTCGAATCCGAGCGTCAAACCGTCACTATACCTACCAATGTGTAA

Protein sequence

MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV

Homology

[Close]

BLAST of IVF0010301 vs. ExPASy TrEMBL
Match: A0A5A7SYN4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00380 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-47
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 94
          PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of IVF0010301 vs. ExPASy TrEMBL
Match: A0A0A0K8V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.8e-45
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGGHKHKKSHSSFSFFSF KSKWS+K DHYDHGGSWLD+KSRSGKVWPSDEDKAHHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFLKSKWSRKGDHYDHGGSWLDEKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 94
          PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of IVF0010301 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.1e-36
Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGG++ KKSHSSFS FSFFKS+  +K DHYDHGG+WLD+  RS KVWPSDEDKAHHWVAE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTN 93
          PGIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 92

[Close]

BLAST of IVF0010301 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-35
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGG++ KKSHSSFS FSFFKSK  +K DHYDHGG+W D+  RS KVWPSDEDKAHHW+AE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTN 93
          PGIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 92

[Close]

BLAST of IVF0010301 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.3e-31
Identity = 70/91 (76.92%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 2  GGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAEP 61
          G ++ KK+H+SFS FSFFKS+  +K DH +H GS LD+  RSGKVWPSDEDKAHHWVAEP
Sbjct: 3  GNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTIPTN 93
          GIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTVTISPN 93

[Close]

BLAST of IVF0010301 vs. NCBI nr
Match: KAA0035006.1 (hypothetical protein E6C27_scaffold57G00470 [Cucumis melo var. makuwa] >TYK02346.1 hypothetical protein E5676_scaffold155G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (502), Expect = 7.09e-64
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93
          PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of IVF0010301 vs. NCBI nr
Match: KGN45868.1 (hypothetical protein Csa_004803 [Cucumis sativus])

HSP 1 Score: 190 bits (482), Expect = 8.00e-61
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGGHKHKKSHSSFSFFSF KSKWS+K DHYDHGGSWLD+KSRSGKVWPSDEDKAHHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFLKSKWSRKGDHYDHGGSWLDEKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93
          PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of IVF0010301 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus])

HSP 1 Score: 158 bits (400), Expect = 3.03e-48
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGG++ KKSHSSFS FSFFKSK  +K DHYDHGG+W D+  RS KVWPSDEDKAHHW+AE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTN 92
          PGIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 92

[Close]

BLAST of IVF0010301 vs. NCBI nr
Match: KGN45869.1 (hypothetical protein Csa_005516 [Cucumis sativus])

HSP 1 Score: 144 bits (364), Expect = 9.63e-43
Identity = 70/91 (76.92%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 2  GGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAEP 61
          G ++ KK+H+SFS FSFFKS+  +K DH +H GS LD+  RSGKVWPSDEDKAHHWVAEP
Sbjct: 3  GNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTIPTN 92
          GIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTVTISPN 93

[Close]

BLAST of IVF0010301 vs. NCBI nr
Match: KAG6592313.1 (hypothetical protein SDJN03_14659, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144 bits (363), Expect = 1.33e-42
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 2  GGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAEP 61
          G ++ KKSHSSFS F+FFK +  +KEDHYDHGG W ++  RSGKVWPSDEDK H WVAEP
Sbjct: 3  GNNRSKKSHSSFSIFNFFKFRKGRKEDHYDHGGYW-NEMPRSGKVWPSDEDKTHRWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTIPTN 92
          GIDRKAKDYID+IYRNR+FESERQTVT+P N
Sbjct: 63 GIDRKAKDYIDKIYRNRIFESERQTVTLPAN 92

[Close]

BLAST of IVF0010301 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12
Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60
          MGG     S   FS FSFFK++ S +    +  GSW DD   + K   SDEDK  +WVAE
Sbjct: 1  MGGKNRSHSSKRFSLFSFFKTRRSHR---VEADGSW-DDFGYTRKAMASDEDK-RYWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVT 89
          PGIDRKA  +I + +  RV ESERQT++
Sbjct: 61 PGIDRKASAFIAKFHATRVSESERQTLS 83

[Close]

BLAST of IVF0010301 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 9.4e-09
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 24 SKKEDHY--DHGGSWLDDKSRSGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYRNRVFE 83
          +++  H+  +   SW DD   + K W SDEDK  +WVAEPGIDRKA  +I + + +RV E
Sbjct: 3  ARRSSHHRVEADASW-DDVIYTRKAWASDEDK-RYWVAEPGIDRKASAFIAKFHASRVSE 62

Query: 84 SERQTV 88
          SERQT+
Sbjct: 63 SERQTL 66

The following BLAST results are available for this feature:

BLAST of IVF0010301 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0010301 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYN4	2.3e-47	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K8V3	4.8e-45	95.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1	[more]
A0A0A0KBW1	4.1e-36	82.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1	[more]
A0A0A0K7Y2	1.6e-35	81.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1	[more]
A0A0A0KAK6	2.3e-31	76.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1	[more]

BLAST of IVF0010301 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035006.1	7.09e-64	100.00	hypothetical protein E6C27_scaffold57G00470 [Cucumis melo var. makuwa] >TYK02346...	[more]
KGN45868.1	8.00e-61	95.70	hypothetical protein Csa_004803 [Cucumis sativus]	[more]
KGN45870.1	3.03e-48	81.52	hypothetical protein Csa_004960 [Cucumis sativus]	[more]
KGN45869.1	9.63e-43	76.92	hypothetical protein Csa_005516 [Cucumis sativus]	[more]
KAG6592313.1	1.33e-42	74.73	hypothetical protein SDJN03_14659, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0010301 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05858.1	6.9e-12	48.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G26620.1	9.4e-09	48.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33511	OS06G0632400 PROTEIN	coord: 1..89
None	No IPR available	PANTHER	PTHR33511:SF17	RIBOSOMAL PROTEIN S12	coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010301.1	IVF0010301.1	mRNA