IVF0010231 (gene) Melon (IVF77) v1

Overview
NameIVF0010231
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 5358257 .. 5358888 (-)
RNA-Seq ExpressionIVF0010231
SyntenyIVF0010231
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCCGAGAAATTGAGAACAAAAAAGAAGTAATAAAAATGTCTCTAAGATGGGCGATGGTGTTTGTAATTGCTGTGATGCTTCTCAGAGCTCAATCTCTAGCTGAGGTACATCGGCCAGCGCTAACCCAACACGATCCTTATTACCCTAATAAGGAAGTGGAGTCGGTGGGTCATCACACTGGTGACACTGCTAATCCTAAAATTGGAAAAACATGCAGAAAAGGCTTGCCATATTCGAAGTGCAAGCCACCCATGTCCGACTAAGGGTGTCTCTCTCTGTTGATATTGGGCACAACTAAATAAAACTACTGGAAAAGCCTCTACATATTATCGGTGCCCCCAGTGATATGGTCTCCTAATATTGCAATCTAATGTTAGTGTTCAAGTTGGTGTCTTTTTTTTCCCCTGTAATATAGTTGTTTGCTGTGATATAATCTATCTTTTATTTGAATCCTCCTTAAATTTTAACTTTTTCTACTTCAATGGGTGAGAGAGAAAGGCTAAGTTGGCTAGTGCTTGGTCTAACCAAGCCTAAGGCCAACTAGCATCGCAAGCATGCATGCATCTTTTAAGACAAGAGACCATCCAAATATTTAGTATGATATTGATCATTTTGGATATAAACCCTCAT

mRNA sequence

AATCCGAGAAATTGAGAACAAAAAAGAAGTAATAAAAATGTCTCTAAGATGGGCGATGGTGTTTGTAATTGCTGTGATGCTTCTCAGAGCTCAATCTCTAGCTGAGGTACATCGGCCAGCGCTAACCCAACACGATCCTTATTACCCTAATAAGGAAGTGGAGTCGGTGGGTCATCACACTGGTGACACTGCTAATCCTAAAATTGGAAAAACATGCAGAAAAGGCTTGCCATATTCGAAGTGCAAGCCACCCATGTCCGACTAAGGGTGTCTCTCTCTGTTGATATTGGGCACAACTAAATAAAACTACTGGAAAAGCCTCTACATATTATCGGTGCCCCCAGTGATATGGTCTCCTAATATTGCAATCTAATGTTAGTGTTCAAGTTGGTGTCTTTTTTTTCCCCTGTAATATAGTTGTTTGCTGTGATATAATCTATCTTTTATTTGAATCCTCCTTAAATTTTAACTTTTTCTACTTCAATGGGTGAGAGAGAAAGGCTAAGTTGGCTAGTGCTTGGTCTAACCAAGCCTAAGGCCAACTAGCATCGCAAGCATGCATGCATCTTTTAAGACAAGAGACCATCCAAATATTTAGTATGATATTGATCATTTTGGATATAAACCCTCAT

Coding sequence (CDS)

ATGTCTCTAAGATGGGCGATGGTGTTTGTAATTGCTGTGATGCTTCTCAGAGCTCAATCTCTAGCTGAGGTACATCGGCCAGCGCTAACCCAACACGATCCTTATTACCCTAATAAGGAAGTGGAGTCGGTGGGTCATCACACTGGTGACACTGCTAATCCTAAAATTGGAAAAACATGCAGAAAAGGCTTGCCATATTCGAAGTGCAAGCCACCCATGTCCGACTAA

Protein sequence

MSLRWAMVFVIAVMLLRAQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIGKTCRKGLPYSKCKPPMSD
Homology
BLAST of IVF0010231 vs. ExPASy TrEMBL
Match: A0A5A7VEN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00050 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MSLRWAMVFVIAVMLLRAQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIGKTC 60
          MSLRWAMVFVIAVMLL AQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIGKTC
Sbjct: 1  MSLRWAMVFVIAVMLLSAQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIGKTC 60

Query: 61 RKGLPYSKCKPPMSD 76
          RKGLPYSKCKPPMSD
Sbjct: 61 RKGLPYSKCKPPMSD 75

BLAST of IVF0010231 vs. ExPASy TrEMBL
Match: A0A5A7VIV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00020 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-06
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 0

Query: 1  MSLRWAMVFVIAVMLLRAQSLAEVHRPALTQHDPYYPNKEVES-VGHHTGDTANPKIG-K 60
          MSL+W MVF IA++LL A++  E HRP LTQ+DP     E++S VG H GD   P  G K
Sbjct: 1  MSLKWVMVFAIAMVLLTAETSTEAHRPRLTQNDP-----EMKSLVGGHIGDKTKPYHGAK 60

Query: 61 TCRKGLPYSKCK 71
           C+KG P+  CK
Sbjct: 61 GCKKG-PHPNCK 66

BLAST of IVF0010231 vs. ExPASy TrEMBL
Match: A0A0A0LII8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176170 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-06
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0

Query: 1  MSLRWAMVFVIAVMLLRAQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKI-GKT 60
          MSL+W MVF IA++LL A++  E HRP LT +DP     E++S+  H GD   P   GK 
Sbjct: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDP-----EMKSMVGHAGDKTIPAHGGKG 60

Query: 61 CRKGLPYSKCK 71
          C+KG P+S CK
Sbjct: 61 CKKG-PHSNCK 65

BLAST of IVF0010231 vs. NCBI nr
Match: KAA0065660.1 (hypothetical protein E6C27_scaffold90G001190 [Cucumis melo var. makuwa] >TYK01422.1 hypothetical protein E5676_scaffold772G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 155 bits (391), Expect = 1.70e-47
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MSLRWAMVFVIAVMLLRAQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIGKTC 60
          MSLRWAMVFVIAVMLL AQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIGKTC
Sbjct: 1  MSLRWAMVFVIAVMLLSAQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIGKTC 60

Query: 61 RKGLPYSKCKPPMSD 75
          RKGLPYSKCKPPMSD
Sbjct: 61 RKGLPYSKCKPPMSD 75

BLAST of IVF0010231 vs. NCBI nr
Match: KGN61603.1 (hypothetical protein Csa_006268 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 3.29e-10
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0

Query: 1  MSLRWAMVFVIAVMLLRAQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIG-KT 60
          MSL+W MVF IA++LL A++  E HRP LT +DP     E++S+  H GD   P  G K 
Sbjct: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDP-----EMKSMVGHAGDKTIPAHGGKG 60

Query: 61 CRKGLPYSKCK 70
          C+KG P+S CK
Sbjct: 61 CKKG-PHSNCK 65

BLAST of IVF0010231 vs. NCBI nr
Match: KAA0065661.1 (hypothetical protein E6C27_scaffold90G001210 [Cucumis melo var. makuwa] >TYK01420.1 hypothetical protein E5676_scaffold772G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 3.37e-10
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 0

Query: 1  MSLRWAMVFVIAVMLLRAQSLAEVHRPALTQHDPYYPNKEVES-VGHHTGDTANPKIG-K 60
          MSL+W MVF IA++LL A++  E HRP LTQ+DP     E++S VG H GD   P  G K
Sbjct: 1  MSLKWVMVFAIAMVLLTAETSTEAHRPRLTQNDP-----EMKSLVGGHIGDKTKPYHGAK 60

Query: 61 TCRKGLPYSKCK 70
           C+KG P+  CK
Sbjct: 61 GCKKG-PHPNCK 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VEN61.1e-3498.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VIV62.7e-0651.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LII82.7e-0649.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176170 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0065660.11.70e-4798.67hypothetical protein E6C27_scaffold90G001190 [Cucumis melo var. makuwa] >TYK0142... [more]
KGN61603.13.29e-1049.30hypothetical protein Csa_006268 [Cucumis sativus][more]
KAA0065661.13.37e-1051.39hypothetical protein E6C27_scaffold90G001210 [Cucumis melo var. makuwa] >TYK0142... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..59

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010231.1IVF0010231.1mRNA