IVF0010212 (gene) Melon (IVF77) v1

Overview


Name	IVF0010212
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Prolamin_like domain-containing protein
Location	chr03: 18732434 .. 18732832 (+)
RNA-Seq Expression	IVF0010212
Synteny	IVF0010212

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACAAAACCAATACAATGAGAGCAATAGTGATTCTCTTATTCGCGATAAACTTGTCAAAATTAGTTCAATCTTCCGGGGTAGACGAAGACTACAATTCACCTATATGGGATGGATGGGTAGACGAAGACAGAGGATACACTCTACGACCATGTTTGGATAGGATGAGAAGTGCAAAATGTCAGGTGGAACTATACAATTACTACTTCAATATAAGTAAGAAGGAATTGGATCTAAATTGTTGTGTTTTTGTTAAAGTCATGGGAAAGAAGTGCGCACAAGCTTTTACTTTTTGGTACCAATTTCCTGGATTGGAAATCTACGAGCCTAATCCTATGAAGGTTTATAATAATTGTATTACCAGACTTGATGCACCTCCACCTGCACCTTTTTAA

mRNA sequence

ATGGCAAACAAAACCAATACAATGAGAGCAATAGTGATTCTCTTATTCGCGATAAACTTGTCAAAATTAGTTCAATCTTCCGGGGTAGACGAAGACTACAATTCACCTATATGGGATGGATGGGTAGACGAAGACAGAGGATACACTCTACGACCATGTTTGGATAGGATGAGAAGTGCAAAATGTCAGGTGGAACTATACAATTACTACTTCAATATAAGTAAGAAGGAATTGGATCTAAATTGTTGTGTTTTTGTTAAAGTCATGGGAAAGAAGTGCGCACAAGCTTTTACTTTTTGGTACCAATTTCCTGGATTGGAAATCTACGAGCCTAATCCTATGAAGGTTTATAATAATTGTATTACCAGACTTGATGCACCTCCACCTGCACCTTTTTAA

Coding sequence (CDS)

ATGGCAAACAAAACCAATACAATGAGAGCAATAGTGATTCTCTTATTCGCGATAAACTTGTCAAAATTAGTTCAATCTTCCGGGGTAGACGAAGACTACAATTCACCTATATGGGATGGATGGGTAGACGAAGACAGAGGATACACTCTACGACCATGTTTGGATAGGATGAGAAGTGCAAAATGTCAGGTGGAACTATACAATTACTACTTCAATATAAGTAAGAAGGAATTGGATCTAAATTGTTGTGTTTTTGTTAAAGTCATGGGAAAGAAGTGCGCACAAGCTTTTACTTTTTGGTACCAATTTCCTGGATTGGAAATCTACGAGCCTAATCCTATGAAGGTTTATAATAATTGTATTACCAGACTTGATGCACCTCCACCTGCACCTTTTTAA

Protein sequence

MANKTNTMRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAPPPAPF

Homology

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BLAST of IVF0010212 vs. ExPASy TrEMBL
Match: A0A5D3C280 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001130 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.8e-69
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 8   MRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELY 67
           MRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELY
Sbjct: 1   MRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELY 60

Query: 68  NYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAP 127
           NYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAP
Sbjct: 61  NYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAP 120

Query: 128 PPAPF 133
           PPAPF
Sbjct: 121 PPAPF 125

[Close]

BLAST of IVF0010212 vs. ExPASy TrEMBL
Match: A0A0A0KEB8 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G054340 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.6e-65
Identity = 118/131 (90.08%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MANKTNTMRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSA 60
           MANKTN MRA+VILL AINL+KLVQSSGVDEDYNS IW+ W+DEDR +TLRPCLDRMRSA
Sbjct: 1   MANKTNAMRAMVILLSAINLAKLVQSSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSA 60

Query: 61  KCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNC 120
           KCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNC
Sbjct: 61  KCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNC 120

Query: 121 ITRLDAPPPAP 132
            TRL APPP P
Sbjct: 121 ATRLSAPPPTP 131

[Close]

BLAST of IVF0010212 vs. ExPASy TrEMBL
Match: A0A5A7TZR1 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001070 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50
Identity = 98/135 (72.59%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 1   MANKTNTMRAIV-ILLFAINLSKLVQSS--GVDEDYNSPIWDGWVDEDRGYTLRPCLDRM 60
           MAN TNT+  I+ ILL A+NL+ LV  S   VD+DYNSPIW+GWVDEDR   LRPCLD M
Sbjct: 1   MANGTNTVGGILTILLLAVNLAILVHPSMADVDDDYNSPIWNGWVDEDRASNLRPCLDMM 60

Query: 61  RSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVY 120
           +SAKCQV+LYNYYFNISKKELDL CCVFVK+MGK CA AF  WY+FPGLE+YEPNPM VY
Sbjct: 61  KSAKCQVQLYNYYFNISKKELDLQCCVFVKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVY 120

Query: 121 NNCITRLDAPPPAPF 133
           NNC+ RL A PP PF
Sbjct: 121 NNCVGRLQALPPTPF 135

[Close]

BLAST of IVF0010212 vs. ExPASy TrEMBL
Match: A0A0A0KQ41 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G381840 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.5e-39
Identity = 81/132 (61.36%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 1   MANKTNTMRAIVIL-LFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRS 60
           M N T  +  +V+L L  ++   LVQ S VD++  S IW  W+DEDR  TL PCL  MRS
Sbjct: 1   MNNSTRVLLVVVMLSLLVVDSLALVQPSTVDDNGISSIWSDWLDEDRAPTLAPCLHMMRS 60

Query: 61  AKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNN 120
            KCQVELYNYYFNISKKELDL+CCV+V  MGKKCA AF FW+ FP LE  +PNPMKVYNN
Sbjct: 61  EKCQVELYNYYFNISKKELDLSCCVYVNYMGKKCAAAFEFWFSFPSLEALKPNPMKVYNN 120

Query: 121 CITRLDAPPPAP 132
           C  RL  P P P
Sbjct: 121 CFKRLTFPAPTP 132

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BLAST of IVF0010212 vs. ExPASy TrEMBL
Match: A0A0A0L535 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008300 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29
Identity = 63/129 (48.84%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 2   ANKTNTMRAIVIL-LFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSA 61
           +N T  +  +V+L L  ++   LV  S +D++  S IW GW+D+DR   L  CL  M+S 
Sbjct: 5   SNSTGALLLVVMLSLLVVDSLALVHPSIIDDNGISSIWSGWIDKDRAPILASCLYLMKSD 64

Query: 62  KCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNC 121
           KCQVELYNYYFN SKKE+DL+CCV+V  +G++CA +F  W+   G +  +PNPMK+YNNC
Sbjct: 65  KCQVELYNYYFNKSKKEVDLSCCVYVNYIGEECAASFESWFSSLGFKALKPNPMKLYNNC 124

Query: 122 ITRLDAPPP 130
             RL  P P
Sbjct: 125 FKRLTVPAP 133

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BLAST of IVF0010212 vs. NCBI nr
Match: KAA0046835.1 (hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA0046840.1 hypothetical protein E6C27_scaffold216G001400 [Cucumis melo var. makuwa] >KAA0065932.1 hypothetical protein E6C27_scaffold10942G00010 [Cucumis melo var. makuwa] >TYK04499.1 hypothetical protein E5676_scaffold409G001130 [Cucumis melo var. makuwa] >TYK14838.1 hypothetical protein E5676_scaffold6575G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 270 bits (689), Expect = 2.96e-91
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 8   MRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELY 67
           MRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELY
Sbjct: 1   MRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELY 60

Query: 68  NYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAP 127
           NYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAP
Sbjct: 61  NYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAP 120

Query: 128 PPAPF 132
           PPAPF
Sbjct: 121 PPAPF 125

[Close]

BLAST of IVF0010212 vs. NCBI nr
Match: KAE8646662.1 (hypothetical protein Csa_004797, partial [Cucumis sativus])

HSP 1 Score: 213 bits (541), Expect = 1.87e-68
Identity = 100/116 (86.21%), Postives = 107/116 (92.24%), Query Frame = 0


Query: 1   MAN-KTNTMRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRS 60
           MAN KTN MRA++ILL  INL+KLVQ  GVDEDYNS IW+ W+DEDR +TLRPCLDRMRS
Sbjct: 26  MANIKTNAMRAMLILLSTINLAKLVQPYGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRS 85

Query: 61  AKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMK 115
           AKCQVELYNYYFNISK+ELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMK
Sbjct: 86  AKCQVELYNYYFNISKEELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMK 141

[Close]

BLAST of IVF0010212 vs. NCBI nr
Match: KAG6578867.1 (hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207 bits (528), Expect = 1.06e-66
Identity = 95/125 (76.00%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 8   MRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELY 67
           M A+VILL AINL+ L Q S  D+DYNSPIWD WVDEDRG  LRPCLD M+SAKCQVELY
Sbjct: 1   MGAMVILLLAINLAFLAQPSTADDDYNSPIWDRWVDEDRGINLRPCLDMMKSAKCQVELY 60

Query: 68  NYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAP 127
           NYYFNISKKELDLNCCVFVKVMGK+CA+AF  W++FP  E++E NPMKVY NC+ RLDA 
Sbjct: 61  NYYFNISKKELDLNCCVFVKVMGKRCARAFAGWFRFPEFEVFELNPMKVYKNCVGRLDAL 120

Query: 128 PPAPF 132
           PPAPF
Sbjct: 121 PPAPF 125

[Close]

BLAST of IVF0010212 vs. NCBI nr
Match: KAA0046841.1 (hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK04493.1 hypothetical protein E5676_scaffold409G001070 [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (526), Expect = 2.96e-66
Identity = 98/135 (72.59%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 1   MANKTNTMRAIV-ILLFAINLSKLVQSS--GVDEDYNSPIWDGWVDEDRGYTLRPCLDRM 60
           MAN TNT+  I+ ILL A+NL+ LV  S   VD+DYNSPIW+GWVDEDR   LRPCLD M
Sbjct: 1   MANGTNTVGGILTILLLAVNLAILVHPSMADVDDDYNSPIWNGWVDEDRASNLRPCLDMM 60

Query: 61  RSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVY 120
           +SAKCQV+LYNYYFNISKKELDL CCVFVK+MGK CA AF  WY+FPGLE+YEPNPM VY
Sbjct: 61  KSAKCQVQLYNYYFNISKKELDLQCCVFVKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVY 120

Query: 121 NNCITRLDAPPPAPF 132
           NNC+ RL A PP PF
Sbjct: 121 NNCVGRLQALPPTPF 135

[Close]

BLAST of IVF0010212 vs. NCBI nr
Match: KAG6575249.1 (hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179 bits (454), Expect = 2.58e-55
Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 1   MANKTNTMRAIVILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSA 60
           MA +T+T+ A+V+LL A+NL   V+ +  D DYNSPIWD W+DEDR Y LRPCL+ M+SA
Sbjct: 1   MAKETSTLGAMVVLLLAVNLQGFVRVTSADVDYNSPIWDRWLDEDRAYYLRPCLNLMKSA 60

Query: 61  KCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNC 120
           KCQV+LYN YFN+SK+ELDLNCCVFVKVMGK CA  F  W+ +P  E+Y+PNPM +Y  C
Sbjct: 61  KCQVQLYNNYFNLSKEELDLNCCVFVKVMGKNCALDFAGWFDYPIFEVYKPNPMNLYKRC 120

Query: 121 ITRLDA 126
           + RL +
Sbjct: 121 VARLSS 126

The following BLAST results are available for this feature:

BLAST of IVF0010212 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0010212 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C280	1.8e-69	100.00	Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0KEB8	4.6e-65	90.08	Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G0543...	[more]
A0A5A7TZR1	1.1e-50	72.59	Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0KQ41	1.5e-39	61.36	Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G3818...	[more]
A0A0A0L535	1.4e-29	48.84	Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0083...	[more]

BLAST of IVF0010212 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046835.1	2.96e-91	100.00	hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA004...	[more]
KAE8646662.1	1.87e-68	86.21	hypothetical protein Csa_004797, partial [Cucumis sativus]	[more]
KAG6578867.1	1.06e-66	76.00	hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0046841.1	2.96e-66	72.59	hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK044...	[more]
KAG6575249.1	2.58e-55	61.11	hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0010212 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008502	Prolamin-like domain	PFAM	PF05617	Prolamin_like	coord: 53..120 e-value: 2.7E-6 score: 27.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010212.1	IVF0010212.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity