IVF0010101 (gene) Melon (IVF77) v1

Overview
NameIVF0010101
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 29663635 .. 29664236 (-)
RNA-Seq ExpressionIVF0010101
SyntenyIVF0010101
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAATCAACGTTCATCTTTCACAATAAATAGGGAAGCCATCTAAAGGAAAAAAGAGCAAAAGAAAAACTTGCGAAAAGAGTTAAAAAGAGAAAACACAAAGAGAGCCAAGATGGAGGGGAAGAAGCTGGCTTTGGTAGTGGTGATGACGACAATGATATTTACGTGTTGTTTAGCTCATGTTGCCTTGAACGAAGAACGTCAGTTTGAGGAAAATGAAAACAAGGAGTACATTCAGCTCTTCTCCGACGATAGTAACAATGTCGGAGAAGGAGTAAAGTACAAAAACGATTACTCGAGGAAGATGATAAAAGAGGCACCGACACCGACACCGACACCGCCGCCACCATCTATTTGTTATGGAAATTTCTGTGGTGGTGGACTACTCCCTTGTGATGAACCATGCTTTTGCAGTATTCCACTGGGTGCAACGAGGGGAAATTGTGTTTTGTATTAATCCCCTTTTCCATGTTATATTATTATGCACGTAAGCTAAGCTTAACTATTTGCTTTCATATCGATAAATGTGATATGCAAATAATTATATAAATAAAATAAAAGTGGAAAAGGTCAGTTACGTTATTGATCTTTTGCTGGCTATT

mRNA sequence

ATTTAATCAACGTTCATCTTTCACAATAAATAGGGAAGCCATCTAAAGGAAAAAAGAGCAAAAGAAAAACTTGCGAAAAGAGTTAAAAAGAGAAAACACAAAGAGAGCCAAGATGGAGGGGAAGAAGCTGGCTTTGGTAGTGGTGATGACGACAATGATATTTACGTGTTGTTTAGCTCATGTTGCCTTGAACGAAGAACGTCAGTTTGAGGAAAATGAAAACAAGGAGTACATTCAGCTCTTCTCCGACGATAGTAACAATGTCGGAGAAGGAGTAAAGTACAAAAACGATTACTCGAGGAAGATGATAAAAGAGGCACCGACACCGACACCGACACCGCCGCCACCATCTATTTGTTATGGAAATTTCTGTGGTGGTGGACTACTCCCTTGTGATGAACCATGCTTTTGCAGTATTCCACTGGGTGCAACGAGGGGAAATTGTGTTTTGTATTAATCCCCTTTTCCATGTTATATTATTATGCACGTAAGCTAAGCTTAACTATTTGCTTTCATATCGATAAATGTGATATGCAAATAATTATATAAATAAAATAAAAGTGGAAAAGGTCAGTTACGTTATTGATCTTTTGCTGGCTATT

Coding sequence (CDS)

ATGGAGGGGAAGAAGCTGGCTTTGGTAGTGGTGATGACGACAATGATATTTACGTGTTGTTTAGCTCATGTTGCCTTGAACGAAGAACGTCAGTTTGAGGAAAATGAAAACAAGGAGTACATTCAGCTCTTCTCCGACGATAGTAACAATGTCGGAGAAGGAGTAAAGTACAAAAACGATTACTCGAGGAAGATGATAAAAGAGGCACCGACACCGACACCGACACCGCCGCCACCATCTATTTGTTATGGAAATTTCTGTGGTGGTGGACTACTCCCTTGTGATGAACCATGCTTTTGCAGTATTCCACTGGGTGCAACGAGGGGAAATTGTGTTTTGTATTAA

Protein sequence

MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY
Homology
BLAST of IVF0010101 vs. ExPASy TrEMBL
Match: A0A5D3E3L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9509G00010 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.4e-61
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0

Query: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKND 60
           MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKND
Sbjct: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKND 60

Query: 61  YSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 115
           YSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY
Sbjct: 61  YSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114

BLAST of IVF0010101 vs. ExPASy TrEMBL
Match: A0A5A7TKL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001870 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 12  MTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAPT 71
           MTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAPT
Sbjct: 1   MTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAPT 60

Query: 72  PTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 115
           PTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY
Sbjct: 61  PTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 103

BLAST of IVF0010101 vs. ExPASy TrEMBL
Match: A0A0A0LGQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.9e-45
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 0

Query: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKN 60
           MEGKKLALVV+M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+
Sbjct: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKD 60

Query: 61  DYSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 115
           DYSRKM+KEAPTPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  DYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113

BLAST of IVF0010101 vs. NCBI nr
Match: TYK30388.1 (hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 245 bits (626), Expect = 3.99e-82
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0

Query: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKND 60
           MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKND
Sbjct: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKND 60

Query: 61  YSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114
           YSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY
Sbjct: 61  YSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114

BLAST of IVF0010101 vs. NCBI nr
Match: KAA0043852.1 (hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa])

HSP 1 Score: 227 bits (578), Expect = 5.89e-75
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 12  MTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAPT 71
           MTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAPT
Sbjct: 1   MTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAPT 60

Query: 72  PTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114
           PTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY
Sbjct: 61  PTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 103

BLAST of IVF0010101 vs. NCBI nr
Match: KGN59161.1 (hypothetical protein Csa_002402 [Cucumis sativus])

HSP 1 Score: 191 bits (486), Expect = 8.78e-61
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 0

Query: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKN 60
           MEGKKLALVV+M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+
Sbjct: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKD 60

Query: 61  DYSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114
           DYSRKM+KEAPTPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  DYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113

BLAST of IVF0010101 vs. NCBI nr
Match: KAG6580718.1 (hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.8 bits (242), Expect = 7.70e-24
Identity = 55/114 (48.25%), Postives = 66/114 (57.89%), Query Frame = 0

Query: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKND 60
           MEGKK+ALVV++ TM FT  LA                   QL +D SN+     +Y  D
Sbjct: 1   MEGKKVALVVLLVTMAFTSALAR-----------------NQLIADGSNDRAGSDEY--D 60

Query: 61  YSRKMIKEAP--TPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCV 112
              KM + AP   P P P P   C+GNFCGGGLLPCDEPCFC IP+G+ RG+CV
Sbjct: 61  ELIKMAEGAPEAAPEPAPSPRPSCFGNFCGGGLLPCDEPCFCFIPMGSQRGSCV 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E3L23.4e-61100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TKL81.3e-55100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LGQ35.9e-4579.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
TYK30388.13.99e-82100.00hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa][more]
KAA0043852.15.89e-75100.00hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa][more]
KGN59161.18.78e-6179.13hypothetical protein Csa_002402 [Cucumis sativus][more]
KAG6580718.17.70e-2448.25hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..43

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010101.1IVF0010101.1mRNA