IVF0010089 (gene) Melon (IVF77) v1

Overview
NameIVF0010089
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLon protease 2-like
Locationchr09: 463061 .. 463450 (+)
RNA-Seq ExpressionIVF0010089
SyntenyIVF0010089
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAATATTGGAATATATTTTAAAAAAATCATCAATTTGCTATATTTGCAAATTGTTTCATAAATTGCCATATCCTTAATATTTTATACCAAATCTGTTATACATTACAAAAACTC

mRNA sequence

ATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAATATTGGAATATATTTTAAAAAAATCATCAATTTGCTATATTTGCAAATTGTTTCATAAATTGCCATATCCTTAATATTTTATACCAAATCTGTTATACATTACAAAAACTC

Coding sequence (CDS)

ATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA

Protein sequence

MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
Homology
BLAST of IVF0010089 vs. ExPASy TrEMBL
Match: A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.5e-34
Identity = 77/92 (83.70%), Postives = 80/92 (86.96%), Query Frame = 0

Query: 1   MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVLENGKAEE 60
           +VGGGRSC        GWRPKMTTGWR+KKASLEA EG+VGGG RRRAEEGVLENGKAEE
Sbjct: 86  VVGGGRSC--------GWRPKMTTGWRQKKASLEAKEGIVGGGRRRRAEEGVLENGKAEE 145

Query: 61  VRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 93
            RKSWRIYWRGRKSRRRMEEEKFAPG FLKQG
Sbjct: 146 GRKSWRIYWRGRKSRRRMEEEKFAPGFFLKQG 169

BLAST of IVF0010089 vs. ExPASy TrEMBL
Match: A0A5A7TUB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00040 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-21
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVL 54
          MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGV+
Sbjct: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVV 53

BLAST of IVF0010089 vs. ExPASy TrEMBL
Match: A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20
Identity = 64/97 (65.98%), Postives = 64/97 (65.98%), Query Frame = 0

Query: 25  GWRRKKA----------------SLEANEGVVGG-------------GTRRRAEEGVLEN 84
           GWRRKK                  LEA EGVVGG             G RRRAEEGVLEN
Sbjct: 8   GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLEN 67

Query: 85  GKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 93
           GKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
Sbjct: 68  GKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 104

BLAST of IVF0010089 vs. ExPASy TrEMBL
Match: A0A5D3CTI7 (Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00120 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 6.9e-20
Identity = 62/95 (65.26%), Postives = 64/95 (67.37%), Query Frame = 0

Query: 14 MTTGWRPKMTT--------------GWRRKKASLEANEGVVGGGTRRRAEEGVL--ENGK 73
          M TGWR K  +               WRRKK  LEA EGVVGGG RRRA+EGVL  ENGK
Sbjct: 1  MMTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGK 60

Query: 74 AEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 93
           EE RKSWRIYWRGRKSRR MEEEKFA   FLKQG
Sbjct: 61 DEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95

BLAST of IVF0010089 vs. ExPASy TrEMBL
Match: A0A5A7TVG1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00760 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.9e-11
Identity = 41/64 (64.06%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 22 MTTGWRRKKASLEANEGVVGGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEE 81
          MTTGWR+KK  LEA EGV+            +ENGK E+ RKSWRIYWRGRKSRR MEEE
Sbjct: 1  MTTGWRQKKLWLEAEEGVLN-----------VENGKDEKGRKSWRIYWRGRKSRRGMEEE 53

Query: 82 KFAP 86
          KF P
Sbjct: 61 KFTP 53

BLAST of IVF0010089 vs. NCBI nr
Match: KAA0025306.1 (hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (383), Expect = 1.01e-44
Identity = 77/92 (83.70%), Postives = 80/92 (86.96%), Query Frame = 0

Query: 1   MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVLENGKAEE 60
           +VGGGRSCGW        RPKMTTGWR+KKASLEA EG+VGGG RRRAEEGVLENGKAEE
Sbjct: 86  VVGGGRSCGW--------RPKMTTGWRQKKASLEAKEGIVGGGRRRRAEEGVLENGKAEE 145

Query: 61  VRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 92
            RKSWRIYWRGRKSRRRMEEEKFAPG FLKQG
Sbjct: 146 GRKSWRIYWRGRKSRRRMEEEKFAPGFFLKQG 169

BLAST of IVF0010089 vs. NCBI nr
Match: KAA0047052.1 (hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 109 bits (273), Expect = 3.55e-28
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVL 53
          MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGV+
Sbjct: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVV 53

BLAST of IVF0010089 vs. NCBI nr
Match: KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (269), Expect = 9.99e-26
Identity = 64/97 (65.98%), Postives = 64/97 (65.98%), Query Frame = 0

Query: 25  GWRRKKASLE----------------ANEGVVGG-------------GTRRRAEEGVLEN 84
           GWRRKK  LE                A EGVVGG             G RRRAEEGVLEN
Sbjct: 8   GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLEN 67

Query: 85  GKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 92
           GKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
Sbjct: 68  GKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 104

BLAST of IVF0010089 vs. NCBI nr
Match: KAA0063229.1 (lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (263), Expect = 6.75e-25
Identity = 62/95 (65.26%), Postives = 64/95 (67.37%), Query Frame = 0

Query: 14 MTTGWRPKMTT--------------GWRRKKASLEANEGVVGGGTRRRAEEGVL--ENGK 73
          M TGWR K  +               WRRKK  LEA EGVVGGG RRRA+EGVL  ENGK
Sbjct: 1  MMTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGK 60

Query: 74 AEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 92
           EE RKSWRIYWRGRKSRR MEEEKFA   FLKQG
Sbjct: 61 DEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95

BLAST of IVF0010089 vs. NCBI nr
Match: KAA0046136.1 (hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 4.98e-14
Identity = 41/64 (64.06%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 22 MTTGWRRKKASLEANEGVVGGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEE 81
          MTTGWR+KK  LEA EGV+            +ENGK E+ RKSWRIYWRGRKSRR MEEE
Sbjct: 1  MTTGWRQKKLWLEAEEGVLN-----------VENGKDEKGRKSWRIYWRGRKSRRGMEEE 53

Query: 82 KFAP 85
          KF P
Sbjct: 61 KFTP 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SHI46.5e-3483.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TUB62.8e-2198.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CCS92.4e-2065.9850S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A5D3CTI76.9e-2065.26Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G... [more]
A0A5A7TVG15.9e-1164.06Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0025306.11.01e-4483.70hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa][more]
KAA0047052.13.55e-2898.11hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa][more]
KAA0034559.19.99e-2665.9850S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal p... [more]
KAA0063229.16.75e-2565.26lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [... [more]
KAA0046136.14.98e-1464.06hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010089.1IVF0010089.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005622 intracellular anatomical structure