IVF0010068 (gene) Melon (IVF77) v1

Overview


Name	IVF0010068
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	KRR1 small subunit processome component
Location	chr01: 19025407 .. 19029843 (-)
RNA-Seq Expression	IVF0010068
Synteny	IVF0010068

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTTAGATTTAGGGTTCAGTTCTTCACCTTCACGCCTCACCTCTGTCTCTCATCTCTGGGCTCTCCCTCTCATCTTCGACACGCCGGCCTTAGTGCCTCACACTCACTCTTCGAAGTCCGACTCTCCCTTGTCGTTGGAGAAGTTTAAGCTTAGTTACTGACTATTTATTTGGATTTGAGGTATTTTCTTCATTGAAAATTTTTCGTGTCTTTTGAGTTTGAAAATTTAGTATATTTGGTTTAATAATTGTTGGAAGTTGGATAAATGTAGTTTTCTTTTGGAGTGTATGTAGTATGTATTAGGGGATTTAGATTGTTGGTGCCTAGGGATGAATGAGAAAATAAACAACCCAACCCAACCCATATTAATTGTGTAAGGATTTCCAGATTTTTCATCTAGGTTTAGCTCCTTTCCCATTGCTTCTCACGTTGGTTTTCCCATTGCTTCTCACGTTGGTTTTCCCATTGCTCTTTTCCAGTTATGGAGGACATAGAGCAACAGCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGGTAAGGAGTTTTATGTTTTACGTTTTAAAATTTTATTCAACTTCGATTTTGTTTCAACTATTCTGTTTCCATCTTTAATTGTTCTAGGCCAATATGTTTTAGTTCCTGTTTTTTCTATCATTTTTATGTGTAGATGGAGGAAGGTAGAAGTTTTTCTTTCAAGTGCTGCGACCTTTTTAATTTTAGGCTATGTTTTCCAGAAAATTATTAGTGGCAGTATAATAGCAACAAGGTTTTGATTTATAACTTTATGAATTTTGGTAATCTTTATCGGTGGAAAACGTTCAGCACACTTCCTATTCTTCCCTTTTTTTTCAATATGCTTGTTTTTTCCTTAAACTTAAAAGATATTTCTGCTATACAATTGGATTAATCAGATTCCAATTCTTAGAGGTTTCAATTTTTCCATTTTCAGAAAAATATTTGCGAGACACATGGCCAGTTGTGAAGTCTGCATTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGGTAAGAGTCCATAAACTCCTAATACAAAAATAAAAAGGTTTATATAACCTAATGAAGGAATGGCTTCGGTTCTGTTTTTTGAGATATTTTGAAACCAGTTGTAATTCTCACTTCATGTGTTTTGATCTCCCACGTTTGGTCAGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGTTAAACAATGATTTGATTTATTTTATGTTATTTGTTCTGACATGGTAGTTTGAGTCTTTCTTTCACCAATCATGTTAATTGGTATCTTGAATTGTGTTTTCTAACCATGTCTTTTGTGTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTACGCAAGAAGGTCAGTATCTTGATTTTATATTCTTTTTCTCTCGAGGCATTTGTCTAAGAACTTTTCCATAGTTGATAGTTGTAATTGTTTATTCTTGAACATGCTCCAATGTCTGAATTTCATCCTATATTCAAGAACTCTATATCTATGGCAACCTACAGAGTTAGCCCTTAATCTCCTTGCATATGCTATAAGCTTAATTCTGAAGTTCTTCCTAAATTCAAGTAGTCTACATGGCTTACTATTACTACAAATTGGGAACATTTGGACATAAATTGAAATGTAGACTTTTATTCTGAATTTGAAAACTAGCCTGTGCTAGGCCACCAATCACCAAAACGTATAAAAGGAGGGGTAAGAAGGGAATTTCGGCCTAGAAAATATGGTTGTTAGGTTGCTTAGTGGTCCTAACACCACGTGGCAGCAGGAGAGGAATATATATAGGTGTTTTGTGCTAGGTTTCTTTATTCGGAATATTATGCATTTTGTATGAACTTTGTTCATTGGCTGAGAACATCCCTCTTACTTGGCTGGAAAACTACTGCCGAATTTCTTTTGTAGTGTTGTTGATCAATACAGTATATATACATCTACTCCTCCCAATACTGTTGTGTCGTATGTGTGCTGGTTGAGTATTCTGCAGGTACCTTGGAGCTTAGCAGCCTGCCATGTCGGAGACTAAGTTTCAGTGTTTTTGTGTGTGTATATGTATCAATATGCATAATGTGGGCAAGTGTGTGTTGTGTTACATAATAATTCTTAGAGGACTACCATTTTTTCATGCCGATTAGGATCTTGTCATCCTTTCACTTTTTATTATCTGCTGTAGAAAAGCTTGAAATTAGACTTTGGACTGACCTTGATTATGATGCAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGTTCATATAGCTTCTTTGATTGATTTCTAAGCTTACTATGTTTCTCTTACTTTGATAAAGATATCTTAATTTAGGTTTCATAGAAGGGAAATTGTGTTTGTCACTTTGTCTAGTCTATGTTCTATTTCTTCTCTCTTATCTTTTAATTGTTATTCTAGCGCAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGTATGTATATTTTCTTTTGCTGCTTTCCTATCATCGCTTTCAGCTTTTCCTCTTATGTAGTGTCAATCTCATTCTTGTTACTGGCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGGTTTCTGGGTCTAATTTCTGCATATAATTTTTGTTACTTCACGATAGCTCTCTGCGTAACTTGGTACCTCATGCAGATTCTCATGATGAAGAAAGAGCTCGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGTATGCCATTTTGACATGTACTTATTTGCTGATTTATTTTACTAGAGTCATGTATTTATTTTTTACATAAGCGTTCTTTTTATCAGGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCCAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGGTGCTCTAGCTGCCTTTCACTTCCTGGAGGCGCAATTTGTCTGTATTTATATTTCAAAAAGCATTTAGGAAAATAGCATGATAATATAATACATAATAGTTATGATGATCTATTCTTAAAATCATAAAAATAATAGTTGCAAAAAAAGAAATAGGCCACAACATACTAGATGCCATATTTAATAAAGATAAACTATTCAAGATTTAGGAAGTGCTGACATGTTATGAAAACATTATTTTATTGTCATCGTGACAGTTTCTATAGAGGTTAAACGCACACATGTTTTGCATTCTAATTTTTTCTCAATGCATTCATCGATAAGACTTTTTGACATGTATTTGCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCTGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGTATACTTTGCTGCGGCTTCTTGATTCTGCTTATCCAATATGTCGAACATTTTCATTCTTTTTACTATTGTATGTGCTCTAATGCTCAATGTGATAATTGTTTTACCTCAATTCAGGAGGCGCCGAAGCAGCAGGATACACAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCAAAAGCCTTGAAGGTATGGGATTGTGTGTGTGGGCTGCATGTATATAGCCGTGGATGCTCCAAGAAGATTTTTTTTTATCTGGAATGGGTCCAATTTGTTTGATAAATTTGTTGCAATTTATATGATCTCGTTGCTTTGCAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCAGAAACTATCAATCCGGAAGCTTATATCGCATCATCCAGCGATCAGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAGAAGTTGGTAAGTATATTGTCAGGGGAGCGAGCTTCGACCCTTGTATATGGAATTACCAAAGGTTCTAGGTCTTTTTGTAGCACTTCTTTTTTGTTTGGTTACATGTCGGATTAGAATCAGTGTCGTTATAATGAGAAAATCCCGAGCCTTATTTCACTGGGGTTACGTTGTGTTTTGCAATCTGCCTTTACTTTCGACGTTTTGAGCTGTTTCTGGCATTGCACTCCCCACCCACCACTACAAATTATATAAAAGAAAACCCTGAT

mRNA sequence

AAATTTTAGATTTAGGGTTCAGTTCTTCACCTTCACGCCTCACCTCTGTCTCTCATCTCTGGGCTCTCCCTCTCATCTTCGACACGCCGGCCTTAGTGCCTCACACTCACTCTTCGAAGTCCGACTCTCCCTTGTCGTTGGAGAAGTTTAAGCTTAGTTACTGACTATTTATTTGGATTTGAGTTATGGAGGACATAGAGCAACAGCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGAAAAATATTTGCGAGACACATGGCCAGTTGTGAAGTCTGCATTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTACGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAAGAAAGAGCTCGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCCAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCTGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGGCGCCGAAGCAGCAGGATACACAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCAAAAGCCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCAGAAACTATCAATCCGGAAGCTTATATCGCATCATCCAGCGATCAGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAGAAGTTGGTAAGTATATTGTCAGGGGAGCGAGCTTCGACCCTTGTATATGGAATTACCAAAGGTTCTAGGTCTTTTTGTAGCACTTCTTTTTTGTTTGGTTACATGTCGGATTAGAATCAGTGTCGTTATAATGAGAAAATCCCGAGCCTTATTTCACTGGGGTTACGTTGTGTTTTGCAATCTGCCTTTACTTTCGACGTTTTGAGCTGTTTCTGGCATTGCACTCCCCACCCACCACTACAAATTATATAAAAGAAAACCCTGAT

Coding sequence (CDS)

ATGGAGGACATAGAGCAACAGCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGAAAAATATTTGCGAGACACATGGCCAGTTGTGAAGTCTGCATTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTACGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAAGAAAGAGCTCGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCCAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCTGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGGCGCCGAAGCAGCAGGATACACAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCAAAAGCCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCAGAAACTATCAATCCGGAAGCTTATATCGCATCATCCAGCGATCAGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAG

Protein sequence

MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAYIASSSDQPLFKKRSKTSS

Homology

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BLAST of IVF0010068 vs. ExPASy Swiss-Prot
Match: O74777 (KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mis3 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.9e-98
Identity = 187/315 (59.37%), Postives = 245/315 (77.78%), Query Frame = 0


Query: 9   NKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTW 68
           NK K   ++ + KPWD D +ID WK+E F    ++   LE SSF+TLFP YREKYLR+ W
Sbjct: 15  NKNK---RYRRDKPWDTD-DIDHWKIEPFTKDDSKESFLEESSFATLFPKYREKYLREVW 74

Query: 69  PVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKIL 128
           P V  AL +FGI   L+L+EGSMTV TTRKT DPY I+ ARDLIKLL+RSVP PQA+KI+
Sbjct: 75  PHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSVPFPQAVKIM 134

Query: 129 DDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSF 188
            D + CDIIKIGN++R KERFVKRR+ L+G N  TLKALE+LT CYILVQG TVA MG +
Sbjct: 135 QDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQGTTVAVMGGY 194

Query: 189 KGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV-KQK 248
           KGLK+VRR+VE+CM N +HP+Y+IK LM+K+ELA DP LANE+WDRFLP+FKK+ V ++K
Sbjct: 195 KGLKEVRRIVEDCMHN-IHPIYHIKELMIKRELAKDPTLANESWDRFLPQFKKRNVARRK 254

Query: 249 KVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRK 308
             K +  K+YTPFPP Q PS++D+++E+GEYFL +++K  KK  +K+E+Q EK  E +++
Sbjct: 255 PAKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKEQQKEKKKEKEKE 314

Query: 309 REAAFVPPKEAPKQQ 323
           R  AF+PP+E+ K++
Sbjct: 315 RMKAFIPPEESSKKR 324

[Close]

BLAST of IVF0010068 vs. ExPASy Swiss-Prot
Match: B3LU25 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11-1a) OX=285006 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.8e-94
Identity = 183/306 (59.80%), Postives = 233/306 (76.14%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 RRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 256
           RRVVE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 257 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAA 316
             KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  E + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 317 FVPPKE 318
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of IVF0010068 vs. ExPASy Swiss-Prot
Match: B5VEQ2 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI1631) OX=545124 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.8e-94
Identity = 183/306 (59.80%), Postives = 233/306 (76.14%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 RRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 256
           RRVVE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 257 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAA 316
             KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  E + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 317 FVPPKE 318
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of IVF0010068 vs. ExPASy Swiss-Prot
Match: C8Z430 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) OX=643680 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.8e-94
Identity = 183/306 (59.80%), Postives = 233/306 (76.14%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 RRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 256
           RRVVE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 257 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAA 316
             KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  E + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 317 FVPPKE 318
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of IVF0010068 vs. ExPASy Swiss-Prot
Match: P25586 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KRR1 PE=1 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.8e-94
Identity = 183/306 (59.80%), Postives = 233/306 (76.14%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 RRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 256
           RRVVE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 257 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAA 316
             KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  E + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 317 FVPPKE 318
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of IVF0010068 vs. ExPASy TrEMBL
Match: A0A5D3CP78 (KRR1 small subunit processome component OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00300 PE=3 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 6.2e-208
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 380
           YIASSSDQPLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of IVF0010068 vs. ExPASy TrEMBL
Match: A0A1S3BGN7 (KRR1 small subunit processome component OS=Cucumis melo OX=3656 GN=LOC103489650 PE=3 SV=1)

HSP 1 Score: 729.2 bits (1881), Expect = 9.0e-207
Identity = 377/379 (99.47%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPP EAPKQQDTQPDGDKNDIAEMAK LKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 380
           YIASSSDQPLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of IVF0010068 vs. ExPASy TrEMBL
Match: A0A0A0K7G6 (KRR1 small subunit processome component OS=Cucumis sativus OX=3659 GN=Csa_7G237820 PE=3 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.0e-202
Identity = 373/380 (98.16%), Postives = 378/380 (99.47%), Query Frame = 0


Query: 1   MEDIEQQ-QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60
           MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY
Sbjct: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60

Query: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120
           REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV
Sbjct: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120

Query: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180
           PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG
Sbjct: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180

Query: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKF 240
           NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKF
Sbjct: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240

Query: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300
           KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Sbjct: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300

Query: 301 KTAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPE 360
           KTA+NKRKREAAFVPPKEAPK QDT+PDGDKNDIAEMAK+LKEKAKAFGKRKAAETINPE
Sbjct: 301 KTADNKRKREAAFVPPKEAPK-QDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPE 360

Query: 361 AYIASSSDQPLFKKRSKTSS 380
           AYIASSSD+PLFKKRSKTSS
Sbjct: 361 AYIASSSDRPLFKKRSKTSS 379

[Close]

BLAST of IVF0010068 vs. ExPASy TrEMBL
Match: A0A6J1GLG6 (KRR1 small subunit processome component OS=Cucurbita moschata OX=3662 GN=LOC111455438 PE=3 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.5e-189
Identity = 349/378 (92.33%), Postives = 359/378 (94.97%), Query Frame = 0


Query: 2   EDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYRE 61
           E+IEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNE GMLEVSSFSTLFPVYRE
Sbjct: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPVYRE 63

Query: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 121
           KYL+D WPVVKSALKEFGI  +LNL+EGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 64  KYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123

Query: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183

Query: 182 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 241
           VAAMGSFKGLKQVRR+VEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK
Sbjct: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 243

Query: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKT 301
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKT
Sbjct: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303

Query: 302 AENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAY 361
           AENKRKREAAFVPPKE PK QDT  DGD NDIA MAKALKEKAKA GKRKAAE+INPEAY
Sbjct: 304 AENKRKREAAFVPPKEPPK-QDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAY 363

Query: 362 IASSSDQPLFKKRSKTSS 380
           IASSSDQ  FKKRSK SS
Sbjct: 364 IASSSDQKHFKKRSKASS 380

[Close]

BLAST of IVF0010068 vs. ExPASy TrEMBL
Match: A0A6J1HWB5 (KRR1 small subunit processome component OS=Cucurbita maxima OX=3661 GN=LOC111468435 PE=3 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 1.1e-188
Identity = 348/378 (92.06%), Postives = 360/378 (95.24%), Query Frame = 0


Query: 2   EDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYRE 61
           E+IEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE GMLEVSSFSTLFPVYRE
Sbjct: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPVYRE 63

Query: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 121
           KYL+D WPVVKSALKEFGI  ELNL+EGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 64  KYLQDAWPVVKSALKEFGIACELNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123

Query: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183

Query: 182 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 241
           VAAMGSFKGLKQVRR+VEECMMNKMHPVYNIKILMMKKELANDPALA+ENWDRFLPKFKK
Sbjct: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALASENWDRFLPKFKK 243

Query: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKT 301
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKT
Sbjct: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303

Query: 302 AENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAY 361
           AENKRKREA+FVPPKE PK QDT+ DGD NDIA MAKALKEKAKA GKRKAAE+INPEAY
Sbjct: 304 AENKRKREASFVPPKETPK-QDTKIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAY 363

Query: 362 IASSSDQPLFKKRSKTSS 380
           IA SSDQ  FKKRSK SS
Sbjct: 364 IALSSDQKHFKKRSKASS 380

[Close]

BLAST of IVF0010068 vs. NCBI nr
Match: KAA0056531.1 (KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa] >TYK12099.1 KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 736 bits (1900), Expect = 1.58e-267
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 379
           YIASSSDQPLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of IVF0010068 vs. NCBI nr
Match: XP_008447125.1 (PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo])

HSP 1 Score: 732 bits (1890), Expect = 5.28e-266
Identity = 377/379 (99.47%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPP EAPKQQDTQPDGDKNDIAEMAK LKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 379
           YIASSSDQPLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of IVF0010068 vs. NCBI nr
Match: XP_004139889.2 (KRR1 small subunit processome component homolog [Cucumis sativus] >XP_031744202.1 KRR1 small subunit processome component homolog [Cucumis sativus] >KGN44267.1 hypothetical protein Csa_015861 [Cucumis sativus])

HSP 1 Score: 719 bits (1855), Expect = 1.14e-260
Identity = 373/380 (98.16%), Postives = 378/380 (99.47%), Query Frame = 0


Query: 1   MEDIEQQ-QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60
           MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY
Sbjct: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60

Query: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120
           REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV
Sbjct: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120

Query: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180
           PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG
Sbjct: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180

Query: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKF 240
           NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKF
Sbjct: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240

Query: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300
           KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Sbjct: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300

Query: 301 KTAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPE 360
           KTA+NKRKREAAFVPPKEAPKQ DT+PDGDKNDIAEMAK+LKEKAKAFGKRKAAETINPE
Sbjct: 301 KTADNKRKREAAFVPPKEAPKQ-DTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPE 360

Query: 361 AYIASSSDQPLFKKRSKTSS 379
           AYIASSSD+PLFKKRSKTSS
Sbjct: 361 AYIASSSDRPLFKKRSKTSS 379

[Close]

BLAST of IVF0010068 vs. NCBI nr
Match: XP_038888683.1 (KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888684.1 KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888685.1 KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888686.1 KRR1 small subunit processome component homolog [Benincasa hispida])

HSP 1 Score: 696 bits (1795), Expect = 1.53e-251
Identity = 361/379 (95.25%), Postives = 367/379 (96.83%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE GMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLR+TWPVVKSALKEFGIV ELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRETWPVVKSALKEFGIVCELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSK KK YTPFPPPQQPSQIDIQLETGEYFL++KKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKQKKPYTPFPPPQQPSQIDIQLETGEYFLSDKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPPKE P  QDT+PD D NDI+EMAKALKEKAKAFGKRKA E INPEA
Sbjct: 301 TAENKRKREAAFVPPKEPP-MQDTEPDQDNNDISEMAKALKEKAKAFGKRKAMEAINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 379
           YIASSSD+P FKKRSKTSS
Sbjct: 361 YIASSSDRPHFKKRSKTSS 378

[Close]

BLAST of IVF0010068 vs. NCBI nr
Match: XP_023511730.1 (KRR1 small subunit processome component homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 673 bits (1737), Expect = 1.13e-242
Identity = 349/378 (92.33%), Postives = 359/378 (94.97%), Query Frame = 0


Query: 2   EDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYRE 61
           E++EQQQNKTKHKGKHDKPKPWDEDPNIDRW VEKFDPSWNE GMLEVSSFSTLFPVYRE
Sbjct: 4   EELEQQQNKTKHKGKHDKPKPWDEDPNIDRWTVEKFDPSWNEGGMLEVSSFSTLFPVYRE 63

Query: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 121
           KYL+D WPVVKSALKEFGI  ELNL+EGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 64  KYLQDAWPVVKSALKEFGIACELNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123

Query: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183

Query: 182 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 241
           VAAMGSFKGLKQVRR+VEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK
Sbjct: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 243

Query: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKT 301
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKT
Sbjct: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303

Query: 302 AENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAY 361
           AENKRKREAAFVPPKE PKQ DT  DGD NDIA MAKALKEKAKA GKRKAAE+INPEAY
Sbjct: 304 AENKRKREAAFVPPKEPPKQ-DTTIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAY 363

Query: 362 IASSSDQPLFKKRSKTSS 379
           IASSSDQ  FKKRSK SS
Sbjct: 364 IASSSDQKHFKKRSKASS 380

[Close]

BLAST of IVF0010068 vs. TAIR 10
Match: AT5G08420.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 510.4 bits (1313), Expect = 1.3e-144
Identity = 264/373 (70.78%), Postives = 309/373 (82.84%), Query Frame = 0


Query: 8   QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDT 67
           + + K KGKH+KPKPWD+DPNIDRW +EKFDP+WN  GM E S+FSTLFP YREKYL++ 
Sbjct: 15  EKREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLFPQYREKYLQEC 74

Query: 68  WPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKI 127
           WP V+SALKE+G+  +LNL+EGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKI
Sbjct: 75  WPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKI 134

Query: 128 LDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGS 187
           L+DE+QCDIIKIGNLVR KERFVKRR+ LVGPNSSTLKALEILT CYILVQG+TVAAMG 
Sbjct: 135 LEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYILVQGSTVAAMGP 194

Query: 188 FKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTVKQK 247
           FKGLKQ+RR+VE+C+ N MHPVY+IK LMMKKEL  DPALANE+WDRFLP F+KK VKQK
Sbjct: 195 FKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANESWDRFLPTFRKKNVKQK 254

Query: 248 KVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRK 307
           K KSK KK YTPFPPPQ PS+ID+QLE+GEYF+++KKKS KKWQ+KQEKQ+EK+ ENKRK
Sbjct: 255 KPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEKQSEKSTENKRK 314

Query: 308 REAAFVPPKEAPKQQD--TQPDGDKNDIAEMAKALKEKAKAFGK-RKAAETINPEAYIAS 367
           R+A+F+PP+E         + +  KNDI E+  +LK K K   K +K  E +N E YIA 
Sbjct: 315 RDASFLPPEEPMNNNSNANKSEDGKNDITELTNSLKSKTKELKKQKKTHERVNAEEYIAG 374

Query: 368 -SSDQPLFKKRSK 377
            SS      K+SK
Sbjct: 375 PSSSADKSSKKSK 387

The following BLAST results are available for this feature:

BLAST of IVF0010068 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74777	3.9e-98	59.37	KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (st...	[more]
B3LU25	5.8e-94	59.80	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11...	[more]
B5VEQ2	5.8e-94	59.80	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI...	[more]
C8Z430	5.8e-94	59.80	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalv...	[more]
P25586	5.8e-94	59.80	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC...	[more]

BLAST of IVF0010068 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CP78	6.2e-208	100.00	KRR1 small subunit processome component OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BGN7	9.0e-207	99.47	KRR1 small subunit processome component OS=Cucumis melo OX=3656 GN=LOC103489650 ...	[more]
A0A0A0K7G6	1.0e-202	98.16	KRR1 small subunit processome component OS=Cucumis sativus OX=3659 GN=Csa_7G2378...	[more]
A0A6J1GLG6	8.5e-189	92.33	KRR1 small subunit processome component OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HWB5	1.1e-188	92.06	KRR1 small subunit processome component OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]

BLAST of IVF0010068 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056531.1	1.58e-267	100.00	KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa] ...	[more]
XP_008447125.1	5.28e-266	99.47	PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo]	[more]
XP_004139889.2	1.14e-260	98.16	KRR1 small subunit processome component homolog [Cucumis sativus] >XP_031744202....	[more]
XP_038888683.1	1.53e-251	95.25	KRR1 small subunit processome component homolog [Benincasa hispida] >XP_03888868...	[more]
XP_023511730.1	1.13e-242	92.33	KRR1 small subunit processome component homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0010068 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08420.1	1.3e-144	70.78	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 44..130 e-value: 2.7E-41 score: 141.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 131..234 e-value: 8.8E-49 score: 165.7
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 131..235
IPR024166	Ribosomal RNA assembly KRR1	PIRSF	PIRSF006515	KRR1	coord: 1..353 e-value: 3.2E-153 score: 507.0
IPR024166	Ribosomal RNA assembly KRR1	PANTHER	PTHR12581	HIV-1 REV BINDING PROTEIN 2, 3	coord: 2..358
IPR041174	Krr1, KH1 domain	PFAM	PF17903	KH_8	coord: 50..130 e-value: 4.9E-30 score: 103.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..379

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010068.2	IVF0010068.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003723	RNA binding