
IVF0010064 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGATAATTGTGTTGGATGGCTAAAATTTCTGGAGAGATCTAGAACGAAAGGAGGTTCCAGTTCCTTCCATCTCCAGACCCTCCTTCTCCATCCTTTTATAACTCCAACAATGTCGATTTTCTCATCACCTAAAACTTCCTTAACACGATCCTCATTCCTACTACTGCCTACAACTCACTTCAAACTTCGCTTTTACAAAGTTCCGTTTGAATGGCTCAAGCAGTATCAAATCTTACTCGATTCGTCTCCTTTACCCCTACCAAAGCCGCCTCCAATGATCCCAAGAAGTTTGTTCGTAGAAGTAACGTCAAAGCCGTGGCAGGGGATGGCAGAGATAATCTCGATCACTTACAGAGAACTATTGGAAAGGAAAAACAAACAACTCAGCCACCGAAGAAACGAGTAGCTCCTGTTGCTCCAATTGGTAATTAATCTGACGGCGACAACTGTACTTTTTGCTTTTGGTTTATTTTGTTAATTGTTTGTGTTTGTTTTTTCTAGGGCTTTGGGATCGATTTCCGACGGCGAGAACGGTACAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGAGCATGGCCATCGCCTCCATTTACCAGCGAAGGAGCTGGGTACAGTAGGGGAAGAACTCCATGGGAGATCAAGGAAGGGGAAAATGAGTATAAGATGAGGTTTGACATGCCGGGTATGACGAAGAACGATGTGAAGGTGTGGGTGGAGGAGAAGATGTTGGTTGTGAAGGCTGAGAAGGTGAAGAAGGCTGGTGAAGAAAATGGAAAGGTTGAAGAAGAAGAAGGAGATTGGTCTGCTAAAAGCTATGGAAAATATAGTAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAGGTAAAGGATGGGGTTTTGTACATAACAATACCAAAGGCTATGGCTACAAGTAAAATTGTGGACATTAATGTCCAGTGAAGAGTTGGGATTAGATTTTGAGAGTAGGTGTAGTTATTTTTTGCTGCTTTCAGTTTCAAAGAACCTGATGTAAACAGTTATGAAGATGAAGTTCTTGCAATTTCATCCTGGCTTTTGTAATCTATATTAAACAAAGCTTCGATGTGAACATTTGGCATTACTGATGGAATGATACCTTTAGTTACCTGTTAAACGCAACTGCTATGAATTTTGTTTTGAGAGAATTGGTTCATCAGAATTTTGAAGAACCGTGGTCCCTTTCTCTTGACTGAATATTCGTAGCTGAAGCGTTACTTCAGGAGTTATGTTATTGCTTTATTGCTTTCAGAAAATGAAGCTGAACATGAATGCCGCGTTAGAGTTTTAGAGAGATGAATCAGAATGCCAATCTTCAGGTGTAAGTTGTTTAGGATGATTCTCTTATCTCTATCTGTTGCCCAGTTAAGTGGTAGAGCCAATACTTCCGTATGAACAAAACCCTCAATGGATTATTTAGAATCAAGAAACTTTCACTATTTCACAACAATTTAAGCAGACCCGAGTTTCCTATTTGGACAGATAAATTTCAGGAACGACAAGCCAGTTTTTTCTTCACTGAATTAGTCTGTTAATTTATGATTGAAACAATAGTATATCCGATCCCACAATAGGATCAAAACGCATCTGGGGAACAAGCTCTCTCAAGGATGGGTCAGTGT GGATAATTGTGTTGGATGGCTAAAATTTCTGGAGAGATCTAGAACGAAAGGAGGTTCCAGTTCCTTCCATCTCCAGACCCTCCTTCTCCATCCTTTTATAACTCCAACAATGTCGATTTTCTCATCACCTAAAACTTCCTTAACACGATCCTCATTCCTACTACTGCCTACAACTCACTTCAAACTTCGCTTTTACAAAGTTCCGTTTGAATGGCTCAAGCAGTATCAAATCTTACTCGATTCGTCTCCTTTACCCCTACCAAAGCCGCCTCCAATGATCCCAAGAAGTTTGTTCGTAGAAGTAACGTCAAAGCCGTGGCAGGGGATGGCAGAGATAATCTCGATCACTTACAGAGAACTATTGGAAAGGAAAAACAAACAACTCAGCCACCGAAGAAACGAGTAGCTCCTGTTGCTCCAATTGGGCTTTGGGATCGATTTCCGACGGCGAGAACGGTACAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGAGCATGGCCATCGCCTCCATTTACCAGCGAAGGAGCTGGGTACAGTAGGGGAAGAACTCCATGGGAGATCAAGGAAGGGGAAAATGAGTATAAGATGAGGTTTGACATGCCGGGTATGACGAAGAACGATGTGAAGGTGTGGGTGGAGGAGAAGATGTTGGTTGTGAAGGCTGAGAAGGTGAAGAAGGCTGGTGAAGAAAATGGAAAGGTTGAAGAAGAAGAAGGAGATTGGTCTGCTAAAAGCTATGGAAAATATAGTAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAGGTAAAGGATGGGGTTTTGTACATAACAATACCAAAGGCTATGGCTACAAGTAAAATTGTGGACATTAATGTCCAGTGAAGAGTTGGGATTAGATTTTGAGAGTAGGTGTAGTTATTTTTTGCTGCTTTCAGTTTCAAAGAACCTGATGTAAACAGTTATGAAGATGAAGTTCTTGCAATTTCATCCTGGCTTTTGTAATCTATATTAAACAAAGCTTCGATGTGAACATTTGGCATTACTGATGGAATGATACCTTTAGTTACCTGTTAAACGCAACTGCTATGAATTTTGTTTTGAGAGAATTGGTTCATCAGAATTTTGAAGAACCGTGGTCCCTTTCTCTTGACTGAATATTCGTAGCTGAAGCGTTACTTCAGGAGTTATGTTATTGCTTTATTGCTTTCAGAAAATGAAGCTGAACATGAATGCCGCGTTAGAGTTTTAGAGAGATGAATCAGAATGCCAATCTTCAGGTGTAAGTTGTTTAGGATGATTCTCTTATCTCTATCTGTTGCCCAGTTAAGTGGTAGAGCCAATACTTCCGTATGAACAAAACCCTCAATGGATTATTTAGAATCAAGAAACTTTCACTATTTCACAACAATTTAAGCAGACCCGAGTTTCCTATTTGGACAGATAAATTTCAGGAACGACAAGCCAGTTTTTTCTTCACTGAATTAGTCTGTTAATTTATGATTGAAACAATAGTATATCCGATCCCACAATAGGATCAAAACGCATCTGGGGAACAAGCTCTCTCAAGGATGGGTCAGTGT ATGGCTCAAGCAGTATCAAATCTTACTCGATTCGTCTCCTTTACCCCTACCAAAGCCGCCTCCAATGATCCCAAGAAGTTTGTTCGTAGAAGTAACGTCAAAGCCGTGGCAGGGGATGGCAGAGATAATCTCGATCACTTACAGAGAACTATTGGAAAGGAAAAACAAACAACTCAGCCACCGAAGAAACGAGTAGCTCCTGTTGCTCCAATTGGGCTTTGGGATCGATTTCCGACGGCGAGAACGGTACAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGAGCATGGCCATCGCCTCCATTTACCAGCGAAGGAGCTGGGTACAGTAGGGGAAGAACTCCATGGGAGATCAAGGAAGGGGAAAATGAGTATAAGATGAGGTTTGACATGCCGGGTATGACGAAGAACGATGTGAAGGTGTGGGTGGAGGAGAAGATGTTGGTTGTGAAGGCTGAGAAGGTGAAGAAGGCTGGTGAAGAAAATGGAAAGGTTGAAGAAGAAGAAGGAGATTGGTCTGCTAAAAGCTATGGAAAATATAGTAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAGGTAAAGGATGGGGTTTTGTACATAACAATACCAAAGGCTATGGCTACAAGTAAAATTGTGGACATTAATGTCCAGTGA MAQAVSNLTRFVSFTPTKAASNDPKKFVRRSNVKAVAGDGRDNLDHLQRTIGKEKQTTQPPKKRVAPVAPIGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSEGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKNDVKVWVEEKMLVVKAEKVKKAGEENGKVEEEEGDWSAKSYGKYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ Homology
BLAST of IVF0010064 vs. ExPASy Swiss-Prot
Match: P31170 (Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP21 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 4.5e-33 Identity = 83/219 (37.90%), Postives = 130/219 (59.36%), Query Frame = 0
BLAST of IVF0010064 vs. ExPASy Swiss-Prot
Match: P09886 (Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32 Identity = 83/204 (40.69%), Postives = 121/204 (59.31%), Query Frame = 0
BLAST of IVF0010064 vs. ExPASy Swiss-Prot
Match: P09887 (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP22 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 9.4e-31 Identity = 71/195 (36.41%), Postives = 118/195 (60.51%), Query Frame = 0
BLAST of IVF0010064 vs. ExPASy Swiss-Prot
Match: Q95661 (Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.7e-30 Identity = 80/210 (38.10%), Postives = 121/210 (57.62%), Query Frame = 0
BLAST of IVF0010064 vs. ExPASy Swiss-Prot
Match: P30222 (Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 6.1e-30 Identity = 70/170 (41.18%), Postives = 106/170 (62.35%), Query Frame = 0
BLAST of IVF0010064 vs. ExPASy TrEMBL
Match: A0A5A7ST00 (Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001860 PE=3 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 1.8e-125 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of IVF0010064 vs. ExPASy TrEMBL
Match: A0A1S3BEA1 (small heat shock protein, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488933 PE=3 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 1.8e-125 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of IVF0010064 vs. ExPASy TrEMBL
Match: A0A0A0KTF5 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591720 PE=3 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 5.8e-116 Identity = 218/233 (93.56%), Postives = 224/233 (96.14%), Query Frame = 0
BLAST of IVF0010064 vs. ExPASy TrEMBL
Match: A0A6J1GWR4 (small heat shock protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458276 PE=3 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108 Identity = 206/237 (86.92%), Postives = 218/237 (91.98%), Query Frame = 0
BLAST of IVF0010064 vs. ExPASy TrEMBL
Match: A0A6J1KH52 (small heat shock protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493168 PE=3 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 3.8e-107 Identity = 204/236 (86.44%), Postives = 215/236 (91.10%), Query Frame = 0
BLAST of IVF0010064 vs. NCBI nr
Match: XP_008446109.1 (PREDICTED: small heat shock protein, chloroplastic-like [Cucumis melo] >KAA0034232.1 small heat shock protein [Cucumis melo var. makuwa] >TYK15688.1 small heat shock protein [Cucumis melo var. makuwa]) HSP 1 Score: 459 bits (1180), Expect = 8.62e-163 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of IVF0010064 vs. NCBI nr
Match: XP_004135300.1 (small heat shock protein, chloroplastic [Cucumis sativus]) HSP 1 Score: 427 bits (1098), Expect = 2.94e-150 Identity = 218/233 (93.56%), Postives = 224/233 (96.14%), Query Frame = 0
BLAST of IVF0010064 vs. NCBI nr
Match: XP_038893285.1 (small heat shock protein, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 403 bits (1035), Expect = 1.22e-140 Identity = 205/236 (86.86%), Postives = 218/236 (92.37%), Query Frame = 0
BLAST of IVF0010064 vs. NCBI nr
Match: XP_022956582.1 (small heat shock protein, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 402 bits (1034), Expect = 1.93e-140 Identity = 206/237 (86.92%), Postives = 218/237 (91.98%), Query Frame = 0
BLAST of IVF0010064 vs. NCBI nr
Match: KAG7032337.1 (25.3 kDa heat shock protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 402 bits (1033), Expect = 2.73e-140 Identity = 206/237 (86.92%), Postives = 218/237 (91.98%), Query Frame = 0
BLAST of IVF0010064 vs. TAIR 10
Match: AT4G27670.1 (heat shock protein 21 ) HSP 1 Score: 142.9 bits (359), Expect = 3.2e-34 Identity = 83/219 (37.90%), Postives = 130/219 (59.36%), Query Frame = 0
BLAST of IVF0010064 vs. TAIR 10
Match: AT1G52560.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-17 Identity = 56/150 (37.33%), Postives = 90/150 (60.00%), Query Frame = 0
BLAST of IVF0010064 vs. TAIR 10
Match: AT1G52560.2 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-17 Identity = 56/150 (37.33%), Postives = 90/150 (60.00%), Query Frame = 0
BLAST of IVF0010064 vs. TAIR 10
Match: AT4G25200.1 (mitochondrion-localized small heat shock protein 23.6 ) HSP 1 Score: 84.7 bits (208), Expect = 1.0e-16 Identity = 62/211 (29.38%), Postives = 107/211 (50.71%), Query Frame = 0
BLAST of IVF0010064 vs. TAIR 10
Match: AT5G51440.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 9.7e-15 Identity = 48/144 (33.33%), Postives = 81/144 (56.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|