IVF0010035 (gene) Melon (IVF77) v1

Overview


Name	IVF0010035
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein PARTING DANCERS
Location	chr03: 417000 .. 420110 (+)
RNA-Seq Expression	IVF0010035
Synteny	IVF0010035

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCCACTTCTCTCGGCTCTCTCTGCCTATCTTCCTTTTTCTCTCACGTCTCTGTGCAATTTGCTGTTACTGCTTAGAGTTGGCTATGGCGAATTCTGCTGATCAAATGGATGGAAATCATATGAAAGCAAAAAATCACGGTATCTTGTTCTTATCTATCTTATTTGTTTGAGTTTTGTGTTATTTCTTAGAAAGTCGAATATCTATCTTACTACGCTTGTTTGTAGTTTCTGCAAATCCAATGATCCTAAAAAAAGAAAATTATAGTTGTCTATCCGAGAACAAAGATATTTCTCCCAGAATGTAAATTATCTGTGCTTTAAAACTGCTTAGGAAAATTGTTAGGAAGCGTTTACGTTCTTGATGTAATTAGTTTAAGCCGGAAAAGAAGAAACCATACAACTCTTATCGTCTTAACTCTTGGTCCGAGTTACATTATCACAAGAACACTCATGATTTAATGCTTTTCTTTCATTAGACATTAGACAATTTTCTGGAAGTCGCGACTTCACATTCTCGAGCCTTCGAATCTCATGCCATCACATAGCAAAATCTGTTTGAGATTGCCATACATTTTAGATCTTTGCGTTCCACCTCTTCCTATTCTTTTTTCTATTTTCAAATTTTCAAATTGGCGAAATAATTTAAAAAAAGATCATCGTGATGATTACATAATTTATATTATCTAATTAATGGTTGTATAAAACTGGACTTGGTCTTATCGTATCGAATTTCTCTATGCGTTGCTTGCACACAAAATGAATTTATACACGTAGAACATGTTAACCAAAATTCTTGCATGTACATGTTTTAAAAATCTGAGCAAGCTCTAGAATGGTGCAATTGGCGTCATCTGTTTGTTTTGCAAATGCAGGTGGTGGGGTCTGTTTGATGAGCAATGTATGGAGAGACGAGCAGCATCCATCCTTCATAAATTTCATATCAAATTTCCTTTGCTCAAACTCATTTCGCCTCAATTTTGTTCCAATTGCCCCAGTAATTAAACAAAAAAAAAAAAAAAACTTTTTCCGTATGTAAATTTCGTTGACACCTCTTCTGTACAGTGTACTCATATTAATCACTTGTCTTAGGACTTGATATTCAATTGTGGGGGTTTATCAGTGGCTTTTGCTTTCCTGACAAGTTGGGATTGCAGCAATACGTCATCAATCTTTAGCAGGTAGCTTTGTTGTTTATGGCTTTTCTTTTTTGCTGGTTTTTCCTTTTGTTTTGTTCGACTCAGTCGATCTTGACAGAGTTCAAAAGTTGAAGAAGCAGTTTGCAAATTTGTATGTTGTTGTTGTCCTTCCAACCAAGGAGCAGAATGATTCATTTGTTCAATCTTACTTCAGGTAATTAGGGTCTGGTATCTTGAATGTTTCCTTGCTTTATCTTTTTTATATATTTTTTAGAGAACTTACGTTTCTTTTCCTTCCACCTAAATCTCGTGAAGAAATGGGATGGAGATTGGTAAGCCACCATTTGTAGCTGTTCAGGATATTGAGATGGGGTTTGAGAAGATTGTAAAGATAGCACACTCTCGTGGAGGTAGTAACCATTTTAAATTTTGGTTGAACACTTTCCTCAATCATCTTCAACAATTATATCAAATTACAGCATGCAAGCAGCAAGATATCATATCAAAACTGAGGACTGAGGTCAGTGTAGATTATATTCTACTTGAATTAGTATTGACAATTCAATATCTAGTGCTTATGTATTTTTACATGAGTTTTAATCACGCCTCCCCCTTCTGGGGATCTTGTTGAAGAGGAAGAGATCAGTACAAGTCATGGATGCTTTTCGTAGGGTCATGTCTTCTGTACCAGGCCTCGATGATCATGATGCAAATTCGGTAAGTTAACCGGCTTGCATCTTTCACTTTCTGCATTGTTTTCTTATTTGTTCCTATCACTAAACATACGTTTTGGTTGGAAAAAAGAGGGAGTTTTGATAATGGGAACTCACGCATCATAGTACAACTCTTTCGTCAATATATATATATATGTCTGGGGGAAGAGAAAAAAAGATTAAACAGGTCAACTAAAAAGTAACTAACTACAGACTAATACACCATGTAGTGGGTAATCCTGCATATTTTGAAATTCAAAGGTATTTTTAATACGAGTTACTAACCTTTGAAAGGGTATTATTTTAGAACCTTTTTTTAGTTTATGGGTATCGAAACTTTTGAAAATTCATAGATTGTTTTGAAATAAAATACTGCCAATTTACATCTAATACTTCGCGATGATGGTACTTTTTGATCTTTTTTTTGCAAGTTCAAGGATACTATTTAATTCTTTTTAAAATTTAGAGTTATTTTTTAAACAAAAGTACAAGTTCATGAATATTTTCACAGTTTAGCCTTATTTGAAACAATGCGGGAGGACACTGATTTTTTATTTTTTATATCAATGAGTGTTCGGGTCGACTTACATGCACCTTGACTGATCTCACAGATAATCTGTTTGATTCTACAGCATTTTGGTATTAAAAAAATCTATAGGATATTAAATCATAGGTAGGTAAACACCCATGAATAATGACCCCTTAGCCCTTTACCATTTGCCCTTTTTTGATGTTTACATTGTCACTAGGCCAACCCATGACTTTGGGAGGACAATGACTTAAAACAATGCCACAGTCAACATGTTTGTTCAAATTCACAGCCATAAAATGACAAGTCTTAATTTTCATTCAACTTTCTAGCAGAATTTTCATAGAAGATTCCAAGGCTAGTTTTCTGCGATAAATGATAATCATATTCTCTATAAGTTCAACTAGATTGTAGCAAAGGGCTAAGAGATGAAAATATCGGGTCCATTTAGTCAAACACGTGATGCTGCCGTATAGGAGGAAATATGATTTTGTTTGTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGATGTAAGCTTTTTTATTTGAACATCTCTACTATTCAGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCGTCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTGGAGAAGGCAGAGAGAATTAGGAGCTTTTTCAGGGATCCAAAGTTTTACCTCAGTCTCAAAATAAATTGA

mRNA sequence

GCGCCACTTCTCTCGGCTCTCTCTGCCTATCTTCCTTTTTCTCTCACGTCTCTGTGCAATTTGCTGTTACTGCTTAGAGTTGGCTATGGCGAATTCTGCTGATCAAATGGATGGAAATCATATGAAAGCAAAAAATCACGGTGGTGGGGTCTGTTTGATGAGCAATGTATGGAGAGACGAGCAGCATCCATCCTTCATAAATTTCATATCAAATTTCCTTTGCTCAAACTCATTTCGCCTCAATTTTGTTCCAATTGCCCCAGACTTGATATTCAATTGTGGGGGTTTATCAGTGGCTTTTGCTTTCCTGACAAGTTGGGATTGCAGCAATACGTCATCAATCTTTAGCAGAGTTCAAAAGTTGAAGAAGCAGTTTGCAAATTTGTATGTTGTTGTTGTCCTTCCAACCAAGGAGCAGAATGATTCATTTGTTCAATCTTACTTCAGAAATGGGATGGAGATTGGTAAGCCACCATTTGTAGCTGTTCAGGATATTGAGATGGGGTTTGAGAAGATTGTAAAGATAGCACACTCTCGTGGAGCATGCAAGCAGCAAGATATCATATCAAAACTGAGGACTGAGAGGAAGAGATCAGTACAAGTCATGGATGCTTTTCGTAGGGTCATGTCTTCTGTACCAGGCCTCGATGATCATGATGCAAATTCGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCGTCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTGGAGAAGGCAGAGAGAATTAGGAGCTTTTTCAGGGATCCAAAGTTTTACCTCAGTCTCAAAATAAATTGA

Coding sequence (CDS)

ATGGCGAATTCTGCTGATCAAATGGATGGAAATCATATGAAAGCAAAAAATCACGGTGGTGGGGTCTGTTTGATGAGCAATGTATGGAGAGACGAGCAGCATCCATCCTTCATAAATTTCATATCAAATTTCCTTTGCTCAAACTCATTTCGCCTCAATTTTGTTCCAATTGCCCCAGACTTGATATTCAATTGTGGGGGTTTATCAGTGGCTTTTGCTTTCCTGACAAGTTGGGATTGCAGCAATACGTCATCAATCTTTAGCAGAGTTCAAAAGTTGAAGAAGCAGTTTGCAAATTTGTATGTTGTTGTTGTCCTTCCAACCAAGGAGCAGAATGATTCATTTGTTCAATCTTACTTCAGAAATGGGATGGAGATTGGTAAGCCACCATTTGTAGCTGTTCAGGATATTGAGATGGGGTTTGAGAAGATTGTAAAGATAGCACACTCTCGTGGAGCATGCAAGCAGCAAGATATCATATCAAAACTGAGGACTGAGAGGAAGAGATCAGTACAAGTCATGGATGCTTTTCGTAGGGTCATGTCTTCTGTACCAGGCCTCGATGATCATGATGCAAATTCGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCGTCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTGGAGAAGGCAGAGAGAATTAGGAGCTTTTTCAGGGATCCAAAGTTTTACCTCAGTCTCAAAATAAATTGA

Protein sequence

MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN

Homology

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BLAST of IVF0010035 vs. ExPASy Swiss-Prot
Match: F4IDW9 (Protein PARTING DANCERS OS=Arabidopsis thaliana OX=3702 GN=PTD PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.2e-81
Identity = 151/223 (67.71%), Postives = 179/223 (80.27%), Query Frame = 0


Query: 21  GVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLTSWDC 80
           GVC+MSN W+ EQ PS INFIS FL +NSFRLNFV I PDLIFNCGG+S+AF F+T WD 
Sbjct: 28  GVCIMSNAWKVEQEPSLINFISAFLSANSFRLNFVSIPPDLIFNCGGVSIAFVFVTKWDF 87

Query: 81  SNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQDIEMG 140
           SN +SIFSRV++LK QFA LYVV  L TKEQ+DSF++SYF+  ME GKP FV V D EMG
Sbjct: 88  SNVASIFSRVKRLKGQFAQLYVVATLSTKEQSDSFMRSYFQYEMEFGKPAFVQVTDAEMG 147

Query: 141 FEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIG 200
           FEKIVKIAHSRG CKQQ + SKL+ ERKR+VQ  + F R ++S+P ++ HDAN+L QAIG
Sbjct: 148 FEKIVKIAHSRGVCKQQKVASKLKVERKRTVQDTNIFIRFVTSIPNINKHDANTLYQAIG 207

Query: 201 SIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN 244
           SIEAIAKASKE IL NTDLS +KA+ +  FF+DP+FYLS K N
Sbjct: 208 SIEAIAKASKEDILANTDLSSKKADTLTRFFQDPEFYLSPKFN 250

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BLAST of IVF0010035 vs. ExPASy Swiss-Prot
Match: Q6L5B5 (Protein PARTING DANCERS homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PTD PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.1e-81
Identity = 148/225 (65.78%), Postives = 183/225 (81.33%), Query Frame = 0


Query: 19  GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLTSW 78
           G GVC MS  WRD+Q PS INFI+ FL +NS+RLNF+ I+PD IFN G LSVAF F T+W
Sbjct: 24  GRGVCAMSTSWRDKQQPSLINFIAAFLAANSYRLNFLSISPDFIFNNGELSVAFIFETNW 83

Query: 79  DCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQDIE 138
           DC N  ++FSRV  LK+Q  +LYVVV +PTKEQN+SF +SY + GM++G P FV V D E
Sbjct: 84  DCQNEGAVFSRVNMLKRQLKHLYVVVAVPTKEQNESFNRSYHKYGMKLGFPTFVPVTDPE 143

Query: 139 MGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQA 198
           MGFEKIVKIAH+ G CKQQDIIS+L+ ER+++VQ  D+F RV++S+PG+D+HDAN+L QA
Sbjct: 144 MGFEKIVKIAHALGVCKQQDIISRLKNEREQAVQCTDSFLRVLTSIPGIDNHDANALAQA 203

Query: 199 IGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN 244
           IGSIEAIAKASK++ILENTDLS +KAE I  FFRDP++YLS KIN
Sbjct: 204 IGSIEAIAKASKKFILENTDLSTDKAETIVRFFRDPQYYLSPKIN 248

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BLAST of IVF0010035 vs. ExPASy TrEMBL
Match: A0A1S3B2D1 (uncharacterized protein LOC103485388 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485388 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 5.0e-134
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60
           MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD
Sbjct: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60

Query: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120
           LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF
Sbjct: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120

Query: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRV 180
           RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRV
Sbjct: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRV 180

Query: 181 MSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSL 240
           MSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSL
Sbjct: 181 MSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSL 240

Query: 241 KIN 244
           KIN
Sbjct: 241 KIN 243

[Close]

BLAST of IVF0010035 vs. ExPASy TrEMBL
Match: A0A1S3B3G4 (uncharacterized protein LOC103485388 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485388 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.4e-130
Identity = 243/266 (91.35%), Postives = 243/266 (91.35%), Query Frame = 0


Query: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60
           MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD
Sbjct: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60

Query: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120
           LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF
Sbjct: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120

Query: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRG-----------------------ACKQQ 180
           RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRG                       ACKQQ
Sbjct: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFWLNTFLNHLQQLYQITACKQQ 180

Query: 181 DIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENT 240
           DIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENT
Sbjct: 181 DIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENT 240

Query: 241 DLSVEKAERIRSFFRDPKFYLSLKIN 244
           DLSVEKAERIRSFFRDPKFYLSLKIN
Sbjct: 241 DLSVEKAERIRSFFRDPKFYLSLKIN 266

[Close]

BLAST of IVF0010035 vs. ExPASy TrEMBL
Match: A0A0A0LMP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401330 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 7.7e-127
Identity = 236/247 (95.55%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MANS----ADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           MANS    ADQM GN +KAKN GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP
Sbjct: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAFLTSW+CSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKF 240
           FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPK 
Sbjct: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240

Query: 241 YLSLKIN 244
           YLS KIN
Sbjct: 241 YLSPKIN 247

[Close]

BLAST of IVF0010035 vs. ExPASy TrEMBL
Match: A0A5D3C5R1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00700 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.0e-123
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 17  NHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLT 76
           N GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLT
Sbjct: 12  NAGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLT 71

Query: 77  SWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQD 136
           SWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQD
Sbjct: 72  SWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQD 131

Query: 137 IEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN 196
           IEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Sbjct: 132 IEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN 191

Query: 197 QAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN 244
           QAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN
Sbjct: 192 QAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN 238

[Close]

BLAST of IVF0010035 vs. ExPASy TrEMBL
Match: A0A1S3B3K1 (uncharacterized protein LOC103485388 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485388 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.2e-123
Identity = 234/266 (87.97%), Postives = 234/266 (87.97%), Query Frame = 0


Query: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60
           MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD
Sbjct: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60

Query: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120
           LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF
Sbjct: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120

Query: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRG-----------------------ACKQQ 180
           RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRG                       ACKQQ
Sbjct: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFWLNTFLNHLQQLYQITACKQQ 180

Query: 181 DIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENT 240
           DIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANS         AIAKASKEYILENT
Sbjct: 181 DIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANS---------AIAKASKEYILENT 240

Query: 241 DLSVEKAERIRSFFRDPKFYLSLKIN 244
           DLSVEKAERIRSFFRDPKFYLSLKIN
Sbjct: 241 DLSVEKAERIRSFFRDPKFYLSLKIN 257

[Close]

BLAST of IVF0010035 vs. NCBI nr
Match: XP_008441175.1 (PREDICTED: uncharacterized protein LOC103485388 isoform X3 [Cucumis melo])

HSP 1 Score: 487 bits (1253), Expect = 1.74e-173
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60
           MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD
Sbjct: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60

Query: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120
           LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF
Sbjct: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120

Query: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRV 180
           RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRV
Sbjct: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRV 180

Query: 181 MSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSL 240
           MSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSL
Sbjct: 181 MSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSL 240

Query: 241 KIN 243
           KIN
Sbjct: 241 KIN 243

[Close]

BLAST of IVF0010035 vs. NCBI nr
Match: XP_008441171.1 (PREDICTED: uncharacterized protein LOC103485388 isoform X1 [Cucumis melo] >XP_008441172.1 PREDICTED: uncharacterized protein LOC103485388 isoform X1 [Cucumis melo] >XP_008441173.1 PREDICTED: uncharacterized protein LOC103485388 isoform X1 [Cucumis melo])

HSP 1 Score: 474 bits (1219), Expect = 6.14e-168
Identity = 243/266 (91.35%), Postives = 243/266 (91.35%), Query Frame = 0


Query: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60
           MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD
Sbjct: 1   MANSADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPD 60

Query: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120
           LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF
Sbjct: 61  LIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYF 120

Query: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRG-----------------------ACKQQ 180
           RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRG                       ACKQQ
Sbjct: 121 RNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGGSNHFKFWLNTFLNHLQQLYQITACKQQ 180

Query: 181 DIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENT 240
           DIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENT
Sbjct: 181 DIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENT 240

Query: 241 DLSVEKAERIRSFFRDPKFYLSLKIN 243
           DLSVEKAERIRSFFRDPKFYLSLKIN
Sbjct: 241 DLSVEKAERIRSFFRDPKFYLSLKIN 266

[Close]

BLAST of IVF0010035 vs. NCBI nr
Match: XP_004138826.1 (protein PARTING DANCERS isoform X3 [Cucumis sativus] >KGN63073.1 hypothetical protein Csa_022044 [Cucumis sativus])

HSP 1 Score: 463 bits (1191), Expect = 5.70e-164
Identity = 236/247 (95.55%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MANS----ADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60
           MANS    ADQM GN +KAKN GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP
Sbjct: 1   MANSSQRDADQMVGNQVKAKNDGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVP 60

Query: 61  IAPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120
           IAPDLIFNCGGLSVAFAFLTSW+CSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV
Sbjct: 61  IAPDLIFNCGGLSVAFAFLTSWECSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFV 120

Query: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180
           QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA
Sbjct: 121 QSYFRNGMEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDA 180

Query: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKF 240
           FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPK 
Sbjct: 181 FRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKL 240

Query: 241 YLSLKIN 243
           YLS KIN
Sbjct: 241 YLSPKIN 247

[Close]

BLAST of IVF0010035 vs. NCBI nr
Match: XP_038884563.1 (protein PARTING DANCERS isoform X1 [Benincasa hispida] >XP_038884564.1 protein PARTING DANCERS isoform X1 [Benincasa hispida] >XP_038884565.1 protein PARTING DANCERS isoform X1 [Benincasa hispida])

HSP 1 Score: 453 bits (1166), Expect = 3.69e-160
Identity = 225/239 (94.14%), Postives = 231/239 (96.65%), Query Frame = 0


Query: 5   ADQMDGNHMKAKNHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFN 64
           A+QMDGN +KAKN GGGVCLMSNVWRDEQHPSFINF+SNFLC+NSFRLNFVPI PDLIFN
Sbjct: 9   ANQMDGNRVKAKNSGGGVCLMSNVWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFN 68

Query: 65  CGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGM 124
           CGGLSVAFAFLTSWDCSNTS I+SRVQKLKKQFAN YVVVVLPTKEQNDSFVQSYFRNGM
Sbjct: 69  CGGLSVAFAFLTSWDCSNTSPIYSRVQKLKKQFANFYVVVVLPTKEQNDSFVQSYFRNGM 128

Query: 125 EIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSV 184
           EIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQD+I KLRTERKRSVQVMDAFRRVMSSV
Sbjct: 129 EIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVILKLRTERKRSVQVMDAFRRVMSSV 188

Query: 185 PGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN 243
           PGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPK YLS KIN
Sbjct: 189 PGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKLYLSPKIN 247

[Close]

BLAST of IVF0010035 vs. NCBI nr
Match: TYK06602.1 (uncharacterized protein E5676_scaffold453G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 451 bits (1161), Expect = 1.54e-159
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 17  NHGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLT 76
           N GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLT
Sbjct: 12  NAGGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLT 71

Query: 77  SWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQD 136
           SWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQD
Sbjct: 72  SWDCSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQD 131

Query: 137 IEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN 196
           IEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Sbjct: 132 IEMGFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN 191

Query: 197 QAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN 243
           QAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN
Sbjct: 192 QAIGSIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN 238

[Close]

BLAST of IVF0010035 vs. TAIR 10
Match: AT1G12790.1 (CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 304.3 bits (778), Expect = 8.8e-83
Identity = 151/223 (67.71%), Postives = 179/223 (80.27%), Query Frame = 0


Query: 21  GVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLTSWDC 80
           GVC+MSN W+ EQ PS INFIS FL +NSFRLNFV I PDLIFNCGG+S+AF F+T WD 
Sbjct: 28  GVCIMSNAWKVEQEPSLINFISAFLSANSFRLNFVSIPPDLIFNCGGVSIAFVFVTKWDF 87

Query: 81  SNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQDIEMG 140
           SN +SIFSRV++LK QFA LYVV  L TKEQ+DSF++SYF+  ME GKP FV V D EMG
Sbjct: 88  SNVASIFSRVKRLKGQFAQLYVVATLSTKEQSDSFMRSYFQYEMEFGKPAFVQVTDAEMG 147

Query: 141 FEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIG 200
           FEKIVKIAHSRG CKQQ + SKL+ ERKR+VQ  + F R ++S+P ++ HDAN+L QAIG
Sbjct: 148 FEKIVKIAHSRGVCKQQKVASKLKVERKRTVQDTNIFIRFVTSIPNINKHDANTLYQAIG 207

Query: 201 SIEAIAKASKEYILENTDLSVEKAERIRSFFRDPKFYLSLKIN 244
           SIEAIAKASKE IL NTDLS +KA+ +  FF+DP+FYLS K N
Sbjct: 208 SIEAIAKASKEDILANTDLSSKKADTLTRFFQDPEFYLSPKFN 250

The following BLAST results are available for this feature:

BLAST of IVF0010035 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IDW9	1.2e-81	67.71	Protein PARTING DANCERS OS=Arabidopsis thaliana OX=3702 GN=PTD PE=1 SV=1	[more]
Q6L5B5	2.1e-81	65.78	Protein PARTING DANCERS homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PTD ...	[more]

BLAST of IVF0010035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2D1	5.0e-134	100.00	uncharacterized protein LOC103485388 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B3G4	4.4e-130	91.35	uncharacterized protein LOC103485388 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LMP7	7.7e-127	95.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401330 PE=4 SV=1	[more]
A0A5D3C5R1	3.0e-123	99.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B3K1	5.2e-123	87.97	uncharacterized protein LOC103485388 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of IVF0010035 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441175.1	1.74e-173	100.00	PREDICTED: uncharacterized protein LOC103485388 isoform X3 [Cucumis melo]	[more]
XP_008441171.1	6.14e-168	91.35	PREDICTED: uncharacterized protein LOC103485388 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_004138826.1	5.70e-164	95.55	protein PARTING DANCERS isoform X3 [Cucumis sativus] >KGN63073.1 hypothetical pr...	[more]
XP_038884563.1	3.69e-160	94.14	protein PARTING DANCERS isoform X1 [Benincasa hispida] >XP_038884564.1 protein P...	[more]
TYK06602.1	1.54e-159	99.56	uncharacterized protein E5676_scaffold453G00700 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0010035 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12790.1	8.8e-83	67.71	CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blas...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.150.20		coord: 153..240 e-value: 4.6E-8 score: 34.6
IPR039172	Protein parting dancers	PANTHER	PTHR37394	PROTEIN PARTING DANCERS	coord: 8..243
IPR010994	RuvA domain 2-like	SUPERFAMILY	47781	RuvA domain 2-like	coord: 168..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010035.1	IVF0010035.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007140	male meiotic nuclear division
biological_process	GO:0048236	plant-type sporogenesis
biological_process	GO:0009555	pollen development
biological_process	GO:0010845	positive regulation of reciprocal meiotic recombination
biological_process	GO:0000712	resolution of meiotic recombination intermediates
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005634	nucleus