IVF0010012 (gene) Melon (IVF77) v1

Overview


Name	IVF0010012
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ras-related protein RABC2a-like
Location	chr03: 20215554 .. 20219186 (+)
RNA-Seq Expression	IVF0010012
Synteny	IVF0010012

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAAACAAAAAGCGGAGAGCCCGTTGATGACTAGTTGTACACACGTACACTACCGGCTCTCGCCAGCTCCTTCACTGTTACACTTCCATTTTTCTCAAAACGAATTCTCTCTCTTTTCCCCATGATTTTGATTTCTTCTTCTTCTTTCTGAAAAAGGGTTACTCTCAAAGAAACTTTTAAAGGGGTGGAACGGAAAAAGGTTGCTTGTTTTGCTTATTTGTGAGTTGTGAGGTAGAAGAAGAAGAAGAAAAATGATGGGTTCTTCTTCAAAAGGAAGATGCATTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGATCTTTCTCCTACCATCGGTTTCTCTCTCTCTCTATATATATATTTTATATATATATGCATGTTTTGATGATTAATTCTCATACCCAGATGCTCCATTTCTGAGTTTTGTCTTATTTTAATCCTCAAAGTAATCTCGATAGCTCTGTTGGTTGGTTGAACATATGTTGATCAGATATTCTTGTTTTTTTCTTCTCCTTTTTGATTACTTTGCTGTTTATAATTAATTTCCTGATTGATTTCTGATATTTCAAGTTGTTGTTGAATTGGGATTTATATGCTAGAATGCTTTCTGGAATTTCAAGGGCTACAGTGTTGCTGTACTGTGAGCTAGTGGCTTTGAACCAACTTTCTGGTTTAGTAAAATTTGTTCGCATATACTTGCTGTTTAGTATCGGGATCATTAAATTTACCACAACGCATTTAAGCTTTTAGGTTCATTGGTGAATTAACATGTATTAGAGCAGGACGTTTTGTGCTTGAAATATTGTCATTTCCATAGGATTTTCATTTGTTGGGTATTTTAGGAATTCTCAAGCCCATATCACAAGTGAGAGAAGTGTTAAAATATTGATATAATTAAATTTATCATAACCTATCAACTAAGTTTTGAGTTTAGGATCACTTAGCAATTCATGACTTAGGAGAGCCATTATGTGTCCTTCGAAGGAGCCAATTATACTTGGTGATGCAGGTGCAAGGTGCCCTTAAGGTTTTCGTTGTTGAGGAGTTTGTAGAGACAATTAAAAGGTCGCCTAGAGAGAGTAGTTTTTTTTTTCTTTTCTTTCTCAAACAATTAATTTCTGTGAGAGAAGCTTGTGATCATCATGATTTATGGATTGGACTGTTGCTCATCACTCCCCATTTTAATCACTATTGCACAATGTTCCATGTCCCATTTAAGTTTAAAATATTTTTGCAACAAAAAGCAAGAATATTATGTAAGATGGATTGGATGATTGATGCTATTTTAACCTTACAATTCCTCCCTTCCCCTGTTTAAGTTTGCTGGGGAGAAGCAGCCTTCTTTAACTTCCCGTTGCTCTCGAGTAATCTCCATTTCGTGCATTGCTTCAGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAGATTGAAGCTAACAATTTGGGACACAGGTAACTGGATGATTAACTAGTTTTTTCTGGTTAAATTTTTACTATTTCACTTGTCCCAGCTTATCTACACAGGATATTTTATGAAGTTTTCTTTTTCCCATCCAATGTGAGAAAATAACATTTGTTCAGGTGTTGTAAAAAACTAGTGTGATTCAATGCTCTTTGTTGAGGGTTTTCTCGTTTATGGCACTTGCCAGTTTGATGCTTTCGAGCATGTTTTATTCTATGTTCTTGTATGCAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGGTATGATAGAAAGGGGACAAAAGTTCTCTTTCCACAATTGTCCTGAAAATAATCTTTGAATTCTTAACCAAGACTCTGTTCAATAATATTAAACGAAAAACAATCAGAAATTGAGAGCATATGGAGACTTTTTTCTTGGTAACTGAGACAACTAGAATTGCGAATTGACATTAGAAATAGACTGAAGAGATGAGAATCGTGCTTCCCCTTCATCTTTTATATTCTATCGTACAGATGGTTAATAGAAGTTGAGGCGTTTGTTTGCCTGTCCGAGTTAAGCAGTATTGAAAACAAACGCTCCATTCAAAACAGTTGGCTGTTTTTTTTCTGTCACCCTAACAACATCTGACAGCTTTTTTCTCCTCATTTTTGTTGTGTTCTTTTCCCACGTTTTCTTTCTTGCACTCTATAAGTATCCGATACCTTTCTATTTTGGAAACTATCTCTCATGGCATGTTTTCTCACTATTGAATGTTTCGGATTTAGTTTGAACTTCATGAGGCCTGACACTGATCTATGTTTCACCAATAGTGTACGATGTTACCAGACGGGAGACGTTCACAAACTTGATAAACATATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTTGGAAATAAAGTCGATCGGGTAAGTTTGTACTACTGTTCCACATCCATCCTTTGTCAACATTCTGTTTCCATACTGTCTTAATTAGCATGCATCGGACAACATTGATATTCGTCAAACCTTTAATCCTTCATTCCAACTTACATTACATTAGGAGAGAATTTTTAAATCATGTTTTTAAGTGTGGCTGTCATGTTCACTAAATATTATTGACAGGGTAGTGAAAGAGCAGTAACAACAGAAGAAGGCATGGAAATTGCCAAGGAGCATAAAAGTTTGTTTCTTGAATGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAGAGAACTCTCTTCAAAGGTAACACTCTTCTTAATACACAAGTATTAGTTTAGGAATTTTAATCAGAATTAGTTATAATCTTTCAGAACAAAACATATAATCTTAATTTCCCTTAAGCCCAAAGAAAACCAAGAAAATAACTCGTCTGTGTTACGTTTTCATACTAAAAAGTATGATAGCTTGTTGGGACATTTTCTCTCAACATAAAATTAAAAATGGCTCTGGTAATGGCAGAAAACTTTCATTTATTGTCCATGTTGGGTTGGCTGTAAAGAACGATCAAAACCCGATCTTCGATGTCAAATGTATATTATTTCATGGCTTTTGGGCATGGTCTAAGTGGTTTATCATGTATAATCCAGATACTGGAAGTTCCAAGTCTACTGGAAAATGGATCTATTGTTGTGAAACAGAAAATTTTGGACAAAACACGAGCACACAAAGAAGTCGAAGTGAACGACAGGGGTTGTTGCCACTGAGAAAACCGTGTGATGGCACAAAACAGAACTTACAGAAACAGATTTAAAAGATCCAAAGGTACTGCTGATGGAAAACGTTGATCAGAACAGACCCAAGAAAATACACAAAAGTGAAGATTACATGATCTTTTGCAATTCTATTTTGGCTATCGCTGTTTCCATCAGTTTTCTTTTTCTTTCTTAAAAAGGGAATAAAAATGCATTTCAATAGTATCTTTGAGATCACTGTATATGGTTGGTTATATTTTGGGCTGTTTGAGGACTTGTAAAAACCGAGTTGCTGAATTTTGTTGAGACAGATTTTGAGTGAGAAAATGTGATAAATTTTCTGTAGATAATGTTAATACAGTTTATTTATTTATTTA

mRNA sequence

AGTAAACAAAAAGCGGAGAGCCCGTTGATGACTAGTTGTACACACGTACACTACCGGCTCTCGCCAGCTCCTTCACTGTTACACTTCCATTTTTCTCAAAACGAATTCTCTCTCTTTTCCCCATGATTTTGATTTCTTCTTCTTCTTTCTGAAAAAGGGTTACTCTCAAAGAAACTTTTAAAGGGGTGGAACGGAAAAAGGTTGCTTGTTTTGCTTATTTGTGAGTTGTGAGGTAGAAGAAGAAGAAGAAAAATGATGGGTTCTTCTTCAAAAGGAAGATGCATTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGATCTTTCTCCTACCATCGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAGATTGAAGCTAACAATTTGGGACACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGTGTACGATGTTACCAGACGGGAGACGTTCACAAACTTGATAAACATATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTTGGAAATAAAGTCGATCGGGGTAGTGAAAGAGCAGTAACAACAGAAGAAGGCATGGAAATTGCCAAGGAGCATAAAAGTTTGTTTCTTGAATGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAGAGAACTCTCTTCAAAGATACTGGAAGTTCCAAGTCTACTGGAAAATGGATCTATTGTTGTGAAACAGAAAATTTTGGACAAAACACGAGCACACAAAGAAGTCGAAGTGAACGACAGGGGTTGTTGCCACTGAGAAAACCGTGTGATGGCACAAAACAGAACTTACAGAAACAGATTTAAAAGATCCAAAGGTACTGCTGATGGAAAACGTTGATCAGAACAGACCCAAGAAAATACACAAAAGTGAAGATTACATGATCTTTTGCAATTCTATTTTGGCTATCGCTGTTTCCATCAGTTTTCTTTTTCTTTCTTAAAAAGGGAATAAAAATGCATTTCAATAGTATCTTTGAGATCACTGTATATGGTTGGTTATATTTTGGGCTGTTTGAGGACTTGTAAAAACCGAGTTGCTGAATTTTGTTGAGACAGATTTTGAGTGAGAAAATGTGATAAATTTTCTGTAGATAATGTTAATACAGTTTATTTATTTATTTA

Coding sequence (CDS)

ATGATGGGTTCTTCTTCAAAAGGAAGATGCATTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGATCTTTCTCCTACCATCGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAGATTGAAGCTAACAATTTGGGACACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGTGTACGATGTTACCAGACGGGAGACGTTCACAAACTTGATAAACATATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTTGGAAATAAAGTCGATCGGGGTAGTGAAAGAGCAGTAACAACAGAAGAAGGCATGGAAATTGCCAAGGAGCATAAAAGTTTGTTTCTTGAATGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAGAGAACTCTCTTCAAAGATACTGGAAGTTCCAAGTCTACTGGAAAATGGATCTATTGTTGTGAAACAGAAAATTTTGGACAAAACACGAGCACACAAAGAAGTCGAAGTGAACGACAGGGGTTGTTGCCACTGA

Protein sequence

MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH

Homology

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BLAST of IVF0010012 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 6.7e-79
Identity = 150/213 (70.42%), Postives = 177/213 (83.10%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNR 121
           KRLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL+++W KE+ELY TN+
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEV 181
           EC+++LVGNKVDR SER V+ EEG+ +AKE   +FLECSARTR+NV++CF EL+ KI+EV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 215
           PSLLE GS  VK+ IL +   H+       GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQ--TNTQSGCC 209

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BLAST of IVF0010012 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.5e-73
Identity = 146/203 (71.92%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNR 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL +IWAKE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEV 181
           +CIK+LVGNKVDR SER V+ EEGM +AK+   LF ECSARTRENV+ CF EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSIVVKQKILDKTRAHK 205
           PSLLE GS  VK+K     RAH+
Sbjct: 181 PSLLEEGSSSVKRK--PDYRAHQ 199

[Close]

BLAST of IVF0010012 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-70
Identity = 136/213 (63.85%), Postives = 166/213 (77.93%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSSGQP--EFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNR 121
           K+LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL +IWAKE++LY TN+
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEV 181
           +CIK+LVGNKVD+ SERAV+ +EG++ A+E+  LFLECSA+TR NV++CF EL  KILE 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 215
           PSL   GS   K+ I  +  A +    +   CC
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPA-QTTSTSSSYCC 210

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BLAST of IVF0010012 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-50
Identity = 102/180 (56.67%), Postives = 128/180 (71.11%), Query Frame = 0


Query: 12  SYDYSFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTVGGKRLKLTIWD 71
           S+DY+FK+LL+GDSGVGKS IL  + S  F    + TIGVDFK+K +T  GKR KLTIWD
Sbjct: 5   SHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWD 64

Query: 72  TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGN 131
           TAGQERF TLTSSYYRGA GII VYDVTRR+TF +L   W +E ++Y T    IK++V N
Sbjct: 65  TAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVAN 124

Query: 132 KVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSI 191
           KVD  ++R V++EEG + A+ H  LF+E SAR    V + F EL  KIL+ P LLE  ++
Sbjct: 125 KVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAV 184

[Close]

BLAST of IVF0010012 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-47
Identity = 96/173 (55.49%), Postives = 125/173 (72.25%), Query Frame = 0


Query: 16  SFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTVGGKRLKLTIWDTAGQ 75
           + KIL+IG+SGVGKSS+LL +  + F  +L+ TIGVDFK+K + + G R KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQ 67

Query: 76  ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDR 135
           ERF TLT SYYRGA G+ILVYDVT+R+TFT L N W  E+E Y T  + +K+LVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDK 127

Query: 136 GSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLEN 188
              R V   EG++ A++H  LF+E SA+TR+ V   F EL  KIL+ P L E+
Sbjct: 128 -DNREVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWES 178

[Close]

BLAST of IVF0010012 vs. ExPASy TrEMBL
Match: A0A1S3C3K9 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.9e-117
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180
           RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 216
           VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of IVF0010012 vs. ExPASy TrEMBL
Match: A0A0A0LN27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.9e-113
Identity = 204/215 (94.88%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180
           RECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++E
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 216
           VPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of IVF0010012 vs. ExPASy TrEMBL
Match: A0A5D3BLP5 (Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00050 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.8e-110
Identity = 214/261 (81.99%), Postives = 214/261 (81.99%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTI------------- 61
           MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTI             
Sbjct: 1   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGEPLCVLRRSQLY 60

Query: 62  ----------------------------------GVDFKIKMVTVGGKRLKLTIWDTAGQ 121
                                             GVDFKIKMVTVGGKRLKLTIWDTAGQ
Sbjct: 61  LVMQVQGALKFAGEKQPSLTSRCSRVISISCIASGVDFKIKMVTVGGKRLKLTIWDTAGQ 120

Query: 122 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDR 181
           ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDR
Sbjct: 121 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDR 180

Query: 182 GSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIVVKQ 216
           GSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIVVKQ
Sbjct: 181 GSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIVVKQ 240

[Close]

BLAST of IVF0010012 vs. ExPASy TrEMBL
Match: A0A6J1GLE8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.8e-104
Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180
            ECIKILVGNKVDRGSERAV+TEEGM +AKEH+SLFLECSARTRENVDRCF+ELSSKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 215
           VPSLLENGS+VVKQKILDKTRA K  E ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 212

[Close]

BLAST of IVF0010012 vs. ExPASy TrEMBL
Match: A0A6J1JMZ9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.4e-103
Identity = 194/214 (90.65%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+ +WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180
            ECIKILVGNKVDRGSERAV+TEEGM +AKEH+SLFLECSARTRENVDRCF+ELSSKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 215
           VPSLLENGS+VVKQKILDKTRA K  E ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRALK--EANDGGCC 212

[Close]

BLAST of IVF0010012 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 431 bits (1107), Expect = 3.67e-152
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180
           RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215
           VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of IVF0010012 vs. NCBI nr
Match: XP_004150373.1 (ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Csa_006823 [Cucumis sativus])

HSP 1 Score: 418 bits (1074), Expect = 3.95e-147
Identity = 204/215 (94.88%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180
           RECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++E
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215
           VPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of IVF0010012 vs. NCBI nr
Match: XP_038885704.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 408 bits (1049), Expect = 2.38e-143
Identity = 203/215 (94.42%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180
           RECIKILVGNKVDRGSERAVTTEEGME+AKEHKSLFLECSARTRENVDRCFRELSSKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215
           VPSLLENGS+VVKQKILD TRA KE   NDRGCCH
Sbjct: 181 VPSLLENGSVVVKQKILDNTRARKEA--NDRGCCH 213

[Close]

BLAST of IVF0010012 vs. NCBI nr
Match: TYJ99964.1 (ras-related protein RABC2a-like [Cucumis melo var. makuwa])

HSP 1 Score: 406 bits (1044), Expect = 7.69e-142
Identity = 214/261 (81.99%), Postives = 214/261 (81.99%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIG------------ 61
           MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIG            
Sbjct: 1   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGEPLCVLRRSQLY 60

Query: 62  -----------------------------------VDFKIKMVTVGGKRLKLTIWDTAGQ 121
                                              VDFKIKMVTVGGKRLKLTIWDTAGQ
Sbjct: 61  LVMQVQGALKFAGEKQPSLTSRCSRVISISCIASGVDFKIKMVTVGGKRLKLTIWDTAGQ 120

Query: 122 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDR 181
           ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDR
Sbjct: 121 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDR 180

Query: 182 GSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIVVKQ 215
           GSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIVVKQ
Sbjct: 181 GSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIVVKQ 240

[Close]

BLAST of IVF0010012 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6602284.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 387 bits (993), Expect = 8.20e-135
Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180
            ECIKILVGNKVDRGSERAV+TEEGM +AKEH+SLFLECSARTRENVDRCF+ELSSKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 214
           VPSLLENGS+VVKQKILDKTRA KE   ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARKEA--NDGGCC 212

[Close]

BLAST of IVF0010012 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 295.0 bits (754), Expect = 4.7e-80
Identity = 150/213 (70.42%), Postives = 177/213 (83.10%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNR 121
           KRLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL+++W KE+ELY TN+
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEV 181
           EC+++LVGNKVDR SER V+ EEG+ +AKE   +FLECSARTR+NV++CF EL+ KI+EV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 215
           PSLLE GS  VK+ IL +   H+       GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQ--TNTQSGCC 209

[Close]

BLAST of IVF0010012 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 275.4 bits (703), Expect = 3.9e-74
Identity = 146/203 (71.92%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNR 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL +IWAKE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEV 181
           +CIK+LVGNKVDR SER V+ EEGM +AK+   LF ECSARTRENV+ CF EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSIVVKQKILDKTRAHK 205
           PSLLE GS  VK+K     RAH+
Sbjct: 181 PSLLEEGSSSVKRK--PDYRAHQ 199

[Close]

BLAST of IVF0010012 vs. TAIR 10
Match: AT3G09910.2 (RAB GTPase homolog C2B )

HSP 1 Score: 275.4 bits (703), Expect = 3.9e-74
Identity = 146/203 (71.92%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNR 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL +IWAKE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEV 181
           +CIK+LVGNKVDR SER V+ EEGM +AK+   LF ECSARTRENV+ CF EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSIVVKQKILDKTRAHK 205
           PSLLE GS  VK+K     RAH+
Sbjct: 181 PSLLEEGSSSVKRK--PDYRAHQ 199

[Close]

BLAST of IVF0010012 vs. TAIR 10
Match: AT3G09910.3 (RAB GTPase homolog C2B )

HSP 1 Score: 275.4 bits (703), Expect = 3.9e-74
Identity = 146/203 (71.92%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNR 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL +IWAKE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEV 181
           +CIK+LVGNKVDR SER V+ EEGM +AK+   LF ECSARTRENV+ CF EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSIVVKQKILDKTRAHK 205
           PSLLE GS  VK+K     RAH+
Sbjct: 181 PSLLEEGSSSVKRK--PDYRAHQ 199

[Close]

BLAST of IVF0010012 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-71
Identity = 136/213 (63.85%), Postives = 166/213 (77.93%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSSGQP--EFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNR 121
           K+LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL +IWAKE++LY TN+
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEV 181
           +CIK+LVGNKVD+ SERAV+ +EG++ A+E+  LFLECSA+TR NV++CF EL  KILE 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 215
           PSL   GS   K+ I  +  A +    +   CC
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPA-QTTSTSSSYCC 210

The following BLAST results are available for this feature:

BLAST of IVF0010012 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	6.7e-79	70.42	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	5.5e-73	71.92	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
O23657	1.9e-70	63.85	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
P36862	2.2e-50	56.67	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q6DHC1	1.4e-47	55.49	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of IVF0010012 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3K9	2.9e-117	100.00	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=...	[more]
A0A0A0LN27	1.9e-113	94.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1	[more]
A0A5D3BLP5	5.8e-110	81.99	Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1GLE8	4.8e-104	90.65	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE...	[more]
A0A6J1JMZ9	1.4e-103	90.65	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4...	[more]

BLAST of IVF0010012 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456546.1	3.67e-152	100.00	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
XP_004150373.1	3.95e-147	94.88	ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Cs...	[more]
XP_038885704.1	2.38e-143	94.42	ras-related protein RABC2a-like [Benincasa hispida]	[more]
TYJ99964.1	7.69e-142	81.99	ras-related protein RABC2a-like [Cucumis melo var. makuwa]	[more]
XP_022952871.1	8.20e-135	90.65	ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related...	[more]

BLAST of IVF0010012 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03530.1	4.7e-80	70.42	RAB GTPase homolog C2A	[more]
AT3G09910.1	3.9e-74	71.92	RAB GTPase homolog C2B	[more]
AT3G09910.2	3.9e-74	71.92	RAB GTPase homolog C2B	[more]
AT3G09910.3	3.9e-74	71.92	RAB GTPase homolog C2B	[more]
AT1G43890.1	1.4e-71	63.85	RAB GTPASE HOMOLOG B18	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 57..79 score: 50.93 coord: 39..55 score: 34.91 coord: 17..38 score: 47.48 coord: 121..134 score: 42.24 coord: 156..178 score: 36.81
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 22..213 e-value: 1.5E-4 score: 15.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 17..181 e-value: 2.9E-89 score: 312.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 14..181 e-value: 2.6E-26 score: 103.4
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 3..214
None	No IPR available	PANTHER	PTHR24073:SF643	SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	coord: 3..214
None	No IPR available	PROSITE	PS51420	RHO	coord: 10..179 score: 9.314865
None	No IPR available	PROSITE	PS51419	RAB	coord: 12..214 score: 31.33107
None	No IPR available	CDD	cd01863	Rab18	coord: 17..178 e-value: 1.24582E-89 score: 258.78
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 19..181 e-value: 1.0E-12 score: 42.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 18..179 e-value: 2.4E-53 score: 180.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..215 score: 14.355977
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..211 e-value: 1.9E-61 score: 208.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 12..214
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..173 e-value: 1.5E-27 score: 94.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010012.4	IVF0010012.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding