IVF0009963 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAGCAAAAAAGGATTTCTGAAGGTTTCATTACTGAATCACCTACCAATGATATGTTTTGGATTTGTTTATATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCAACATAGTTTGATCCATATACTAGGTTATAGGGAGTCAAAATTTCAGTAAGTTGTTATGATTCAACCAAGACTAGAAGACGTATAATTTATAGACTACGAAACAAAGATTCGAATGATTAG ATGAAAAAGCAAAAAAGGATTTCTGAAGGTTTCATTACTGAATCACCTACCAATGATATGTTTTGGATTTGTTTATATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCAACATATAAGTTGTTATGATTCAACCAAGACTAGAAGACGTATAATTTATAGACTACGAAACAAAGATTCGAATGATTAG ATGAAAAAGCAAAAAAGGATTTCTGAAGGTTTCATTACTGAATCACCTACCAATGATATGTTTTGGATTTGTTTATATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCAACATATAAGTTGTTATGATTCAACCAAGACTAGAAGACGTATAATTTATAGACTACGAAACAAAGATTCGAATGATTAG MKKQKRISEGFITESPTNDMFWICLYNEDPILGYVSGRIQHISCYDSTKTRRRIIYRLRNKDSND Homology
BLAST of IVF0009963 vs. ExPASy Swiss-Prot
Match: A5J1W9 (Translation initiation factor IF-1, chloroplastic OS=Cucumis sativus OX=3659 GN=infA PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.9e-25 Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 0
BLAST of IVF0009963 vs. ExPASy Swiss-Prot
Match: P08698 (Translation initiation factor IF-1, chloroplastic OS=Spinacia oleracea OX=3562 GN=infA PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.6e-15 Identity = 48/79 (60.76%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of IVF0009963 vs. ExPASy Swiss-Prot
Match: Q95GN8 (Translation initiation factor IF-1, chloroplastic OS=Cabomba caroliniana OX=4426 GN=infA PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.3e-14 Identity = 46/79 (58.23%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of IVF0009963 vs. ExPASy Swiss-Prot
Match: A1XFZ0 (Translation initiation factor IF-1, chloroplastic OS=Nuphar advena OX=77108 GN=infA PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.3e-14 Identity = 46/79 (58.23%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of IVF0009963 vs. ExPASy Swiss-Prot
Match: Q6EW17 (Translation initiation factor IF-1, chloroplastic OS=Nymphaea alba OX=34301 GN=infA PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.3e-14 Identity = 46/79 (58.23%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of IVF0009963 vs. ExPASy TrEMBL
Match: A0A6M8YGU1 (Translational initiation factor 1 OS=Cucumis melo subsp. agrestis OX=217619 GN=infA PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 9.5e-24 Identity = 58/75 (77.33%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of IVF0009963 vs. ExPASy TrEMBL
Match: G3ETT2 (Translational initiation factor 1 OS=Cucumis melo subsp. melo OX=412675 GN=infA PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 9.5e-24 Identity = 58/75 (77.33%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of IVF0009963 vs. ExPASy TrEMBL
Match: A0A1S4EU46 (translational initiation factor 1 OS=Cucumis melo OX=3656 GN=infA PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 9.5e-24 Identity = 58/75 (77.33%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of IVF0009963 vs. ExPASy TrEMBL
Match: A0A1X9Q1P3 (Translation initiation factor 1 OS=Cucumis sativus OX=3659 GN=infA PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22 Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 0
BLAST of IVF0009963 vs. ExPASy TrEMBL
Match: A0A343UM67 (InfA OS=Cucumis sativus var. sativus OX=869827 GN=infA PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22 Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 0
BLAST of IVF0009963 vs. NCBI nr
Match: YP_004841818.1 (translational initiation factor 1 [Cucumis melo subsp. melo] >YP_009860108.1 translational initiation factor 1 [Cucumis melo subsp. agrestis] >AEM76927.1 translational initiation factor 1 [Cucumis melo subsp. melo] >QKK36691.1 translational initiation factor 1 [Cucumis melo subsp. agrestis]) HSP 1 Score: 116 bits (290), Expect = 2.90e-32 Identity = 58/75 (77.33%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of IVF0009963 vs. NCBI nr
Match: A5J1W9.1 (RecName: Full=Translation initiation factor IF-1, chloroplastic [Cucumis sativus] >AVE15366.1 InfA [Cucumis sativus var. sativus] >ABI97451.1 translation initiation factor 1 [Cucumis sativus] >ABI98780.1 translational initiation factor 1 [Cucumis sativus] >ARQ16113.1 translation initiation factor 1 [Cucumis sativus] >ARQ16196.1 translation initiation factor 1 [Cucumis sativus]) HSP 1 Score: 112 bits (281), Expect = 6.84e-31 Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 0
BLAST of IVF0009963 vs. NCBI nr
Match: QJA16179.1 (translational initiation factor 1 [Siraitia grosvenorii]) HSP 1 Score: 98.2 bits (243), Expect = 4.29e-25 Identity = 51/75 (68.00%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of IVF0009963 vs. NCBI nr
Match: ASY96339.1 (translation initiation factor 1 [Cucumis melo subsp. agrestis]) HSP 1 Score: 83.6 bits (205), Expect = 1.60e-19 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of IVF0009963 vs. NCBI nr
Match: NP_054969.2 (translation initiation factor 1 [Spinacia oleracea] >P08698.1 RecName: Full=Translation initiation factor IF-1, chloroplastic [Spinacia oleracea] >CAA27212.1 unnamed protein product [Spinacia oleracea]) HSP 1 Score: 80.5 bits (197), Expect = 4.67e-18 Identity = 48/79 (60.76%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of IVF0009963 vs. TAIR 10
Match: AT4G11175.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 48.5 bits (114), Expect = 2.3e-06 Identity = 29/72 (40.28%), Postives = 40/72 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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