IVF0009938 (gene) Melon (IVF77) v1

Overview


Name	IVF0009938
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	serine/arginine-rich splicing factor RS40-like isoform X1
Location	chr06: 22630488 .. 22636817 (+)
RNA-Seq Expression	IVF0009938
Synteny	IVF0009938

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAATAATAAAAAAAAGACTACAACCACCCCAGCGGTTCCCACTCGTCTCTCTCTCTCTCTCTCTCTCGCAATCCCCATCCCTCTCCGGCAGCGGGCTACTACGACGGTGACGCGGCTTCTCTTGGGGGCACGACCAGGCGACAGCGCAACCCAGCGCAGATCTGCAATATTACCCACCTCCGGCGTTTGATCGCCTACGCAACAACGTATCTCGGCGACACTCGGATCTGCAACGCCCTCACCCTCGGGTCGCTGGATCTGGCTACACACACACCTCGACGGCCCGATCTACGGCGTAAACTCATTTGGACGACGATCGAGACTCGCGGTAAGTAACTCAGTGCCTCAGTTCTCCTTCAGTTACGATTTCGCAAGATCCAAGTCGGCAGGGACGGTTTCAGGAACTCAAACAATTAGCAATTGACGCGCATTAAGAAGGAACATAGTAAGTGTTTCTCATTTTAGGAATTTTTATTCTCTGACTTAAATTTTCTTGTATGCTTCTGGTTGCGCATCAAATTGTGTTGTGAATTGTATGCTTGGATATGTTTGGGAACAAACACTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCACAGTTGCTTATGTTAATGTCAAATTGTATGTTTTTCTGTTAACTGTTGGGTTGATAGTTGAAATTATGGAGTTCCATTGGATGATTATGGTCGGCCATTTACAAGAATAATACCTCTATAACCATATGATTGACCTACTGATAAATGAAAACATGACCTAGTTAGAAGGGATAAGAGTTCATAGTTAAATCTATGATAGACCACATAATAGTTAGAAGGGATAAGAGGTTATAGTTAAATCTATGGTAGACCACGACTTAGTATTTAATATTTGGATAAGGGTTTTTTTTATACAAATATTGTACGGTTAAGATAAGTTGCTGTGAGATTAGTTGAGGTGTTCGGCTTGTTGGATGGTTACAAATATATGAAAAAAGATAAAAAAGAAGAGAAAGAATGATACCTCTATAGTGATGATCAATGAGACTAGCTTAGCTTGTCTAAGAATGATACCTGGTGTTTTGCTCTAGGCTCCAGAAAGCATTTATATAGCACTAAAAGTTGTGGTTGTAAGTGGTTAGAATTTGGAACTTAGGACCTCAAATGTTGGATATAGCTGGTCAAACTTATAGAGCCTTTTGTATGAAGCAAAAGGTCATAAATTTATTTCCTTTTCCCCTTCTCTCTTTGTCAATCATGGGTCCTCACTTTTGATATCTACTTCAAATATTAAAACAGTTATTATTATTGAGATGACCAACGCCTGAAAGCGTTTGATGATGGTTTCAGTTTTGGACACGGTTAACCATAAACTGCGAGGTTTTTTATTTGTTTTTTTTTTTGATTTTTTTTGGGAATTCGTTAAATAGAAAATAAAAACATTGCATGGGGAAACATTGTTAATTGATTAATTACGATTTTGTACACTGTACTTACATTCAAATATCCAAATTTAGTCTCTACTCATAATACTTCAAATTTGTCCTCACTGTTTGTTTATCGTTTATTTTTTATTTTATGACATTAGGTCTTAATTAACCTTCTCTATCAATTTTGAAAATACAATTACAGTTGTCTTTTCTTGAATGGAAAAATACATATTTTTTATTTAACCAATTTGATAGAAATTAAAACTATGTAAGAATTATAAAATAAAGGGAAATTTGCATAAATCACCCTTCTACCCTTCTAGAATCAGGTTTGGTTACAATTACACTGAAAAACTTTTAGTTTGATCAATTATACCCTTATATTTTGCTAGTGGTTGCAATTAGCCATTTTTAAATTAACATTTATTACTTTAAAACTAAAAAGTAAATAAAAATAAGGATTCTTTCTCATCTCACATTCCTTATCTCTCCTCTTTCTTCTTCTTCTATCATTTCTCCCCATCTCCATCTTCCCGCTCTGGACAACAAATAAACTAAACAATTCAAACCTTTTACTAATTTCAATTTGAAGTTAGTAGAAGTGGGAGATACAATTGAATTGTGCAATAAAAATGATTCAAGTATTGCCATAAAATTCAATAGCATTGCCCTTGATTTTCAGTGCAATATTGAAGACCTCAGTATTCTTGTTCTCCTCTCTTCTTATTTCTTTGTTTTCTCTTGTTTTCTTGTTCCTTTTTGTTCTTCTTTCTTTTTTGTTTCACCGCTTGTTTTCTTCCATCTTTCTCATATTTTATCATGTTCAAAATCGACCAAGTTTCTTTTGAGATAAAATAGAAATGGCCATATATTTATCTATTGAAAAAGTTATGAAATAGAGCCAAATCAAGATATTCTTTTTAAATTAACCTTTTTTTTTTCTCGTTTTACACCTTCCGACAAAGAAAGCTCATTCCCTCATTTTATGGAAAATGCAACTGAAGTTTCAAAGTCTCCCACTTCTCGTAACTCGAATCGGAATTTGTATAAGGTTTGGATTGTTTATTACAAAGGTTTGAATTGTTTAGTTTATTTGTTTCTTAGAGAAGGGGGAGAGAAAGATGGAGATGAAGACCAAAGGGATGATGGAGGGAGAAGAAGAAGAGAGAAAATCTTTATTTTTATTTTTCAATTTTAAAATATCAAATTATAATTAAAGAAATAAAGGTTAATTTAAAAATGAGGTTAATTGCAACCATCTAACAAATTATAAGAGCATAATTGATCAAATTGAAAGTTGTAATTGTAACAACCCATAGTTTAGGGGTGGTTTATGCAATTTTCCTTACAATAAATGGACTCTATTTGGACATTTAAAAGTATTGAAGTAAACTAAAATGGAATGAGATCCCAAAGTATAAGAATCAAAATATAATTATTTATAATTTTAAAAACTAAACGATAACGTATCACATTTAAAAGTGTTACACCATTATAAATATCATTTTTTAAAGAAGCAATTCTTTAGGAAAAACAATTTGACACAGGCTTGCTTAACTTATTTGCAGCTTAAGTACTGCATAGTTGTTGATTCTTAAAATACGATCTTTACTTTTACAATTCGTTTCAAATAACTTTCTTGTTGATGTGGTGAAACTAGGTTTCAGGAACTATGACGCCTTTGTATATTTTCATTTTTTATTTTTACAGAAGTAATAATAAGATACGTCTGCTGTATTATTTTTTATATAAATATGTACTGATATATTTAAAAGTACAATATCTTGTATGTTATTTTGTAAATTTGGTAACAGGCTTATTTGCAAAAGGTAAGTACATGGTGGTTATGATCTTTTTTCTAATGTGTTCACTTGGGATTATTTTCAAATAGTTGTCTTGTTGATGTCTGTCTGGTTCCCTTTTCCAGTTCGCGTTCTTTTTTTACTCTCCCTCCTAGGTAGGTTGTATCCTTGAAATTTCATTCTTATTTTCATATATCAATGAAAAGTTTGCTTATTGTTGAAATAAAATGGTTGTCGAGTTGATGTGGTGAAATTAAGTTTCGTGAACTTAATGCCGTGTTTGTATGTGTTTTTGTTTTATCATGCAAGAGATTGTTAAATGTTGTATTGTTATTCCAATTTTTGTTCAGGTAGTATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGTGAGCTTCTAGCCGTAAAATGCATGTTTATTTTTAATTCCTTCTTTTATCTAATAAACTTATAAGACGTATACTATAAACACAGAGAGGGCGTTTGTGTTCTTTTCCTGAATTTGTTTTGAAGTAGTGTGTAATTTTTTCACGCGGATCATACCAATTGCAAAAAGGAAAAACAAAAATTGTAATTTGCAGAGTCGCTGATAATATTTAATATATGAAAAATGCTGAACTGAAAAAGTAACTCTATCCACCAAGAAAGTGTTGGATCAATTATCGGTAAGACAACCCAGCGGTTGGAAATTCCTCCAAAGCAGTTCTCGTTGCATTTGGTGCCTTGCAATACGAATGGGCATCGTCCAGCATATGGAAATCAGAGAAGGCAACATTTGTTGAGTGTTTGGTGGAGGATTCTAAAAAAGTTTTGAGAAAAGAAGAGCGTATATTTTAAATCCTAAAACTCCTTGGCCAGAATTTTCTTTGGTGCAGGATTTCCTTCGCACATTCATAATCTCCTTGGATAAAGATTGGTCTACAGAATTGAGTTTTCCACCTGTGACAGGCTTCCTCTTCTTGTTTCCAAGAAGATCCATGATCCTCAATGGCACTACCACCTTACATTTTCCTCAGACACTTTGCTTTCCATTTCTCGTGACTTTTGCCTGCCTACAATTTCATACGTTGTTTCGAGGTTGAAACATTGTCAACCTTAGCTCCAAGGATGCGGAATAATGGAGAAGGCACTTTCTATTTGTAGACCTACCATGAGACATCCTGTTTTTCATTGCTCCTTGACACCACTTAGTTCACAATACAAGGTCTGTTGCTAAATTCACTGGTAACTTAGTCTATAGATTTCACGGTGGTTGCAAATATTTCTTTCTTATGGTAAGAACTTTTTGTGGTTTGTTGAATATATGTTCTAGAAAGGTGATGTTGCATTTTGAGGAGTTCTTCAGTGGGAAAATTCTCAGTCTTGTAACATTGTTAGTGTCTCATAGATCCACAGTTAGTTATTCAGTTTTGGTTGTTTGATTGGTTTCCAGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAAGTAACGCACATTGATTTGACACATTTTCCAACAAAGTCTTTCCTTTCCATCCCTTTGTGGAACTTTTATTTGATTTTATTTACCATAGCTTCTACTGTAGTTTGTATTTTGATTGATCATTCTTTTCTCTGTAGCAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTTCTAATACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCGTTGGAGGTTACAAACATGAGGTGCGTTTTTCTTCTTTGAATTGCATTTTAAGTGAGTAGGTAACTATATCGTTATTGTTATGCCTTAATTATTATTATTGTGTACAGCAAATTGATGGACCGAGTGATTTCTGTGGAATATGCTGTTCGAGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGGAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGACTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCTGATTATGGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAAAGATCAAGTGACCATACTAGGGCTCCCAGCCGCAGTCCTCTCCATCAGAGGGAAAGACCAAATGGTGACCGAATCCCCAACCGAAGTCCTAGTCCTTACAGGAGAGAGAGGGAGAGGAGGAGTCCTATTGATGATGGACGTGGCACAAGCTATAGTCCTCGTGATAGAGAAAGGTCGAACCCGGACAACGGCCATGATCACCAGGAGAATACAGTAGCTGAACCCGGTGAGTGCCCCAGTTACAGTGGCACTCAGAGCCCGAAGCATCGGGGATATAACAGGTTTGTACTATGAGTTCATTTGATTGTTTTTACTATTACTATTCTTGATTCTTTTTTGAATTTTTTGTCTTATGCCTGCGTTCGTGTTATGGTTTCGCAGCAGCCGTTCACCACAAGCAGAGGAATGATGAACTAGAAAATGGGAAGTGACATCGATGATCTCATTTGCTTCAGAGTACGTTTAGTTGTATAATCAGTATTAGTGGTAAACACATGTATTTGTAAGGATAAAGTTTCATTTGTGGTTCTTCAGTTTGTAGCGATTCTATGGATATGCTGTTGCCAGATTTTAGTTAACAATCAAAATACACAGCACTCTGATCTTTAGCTAGTTGTGAGTGACGTTGGCTTTTGGCAGTTTAAAAGCACTTTTCAAAATTATTGTTCATACTGTTTGAGTTTTTCAAGGAGG

mRNA sequence

AAATAATAATAAAAAAAAGACTACAACCACCCCAGCGGTTCCCACTCGTCTCTCTCTCTCTCTCTCTCTCGCAATCCCCATCCCTCTCCGGCAGCGGGCTACTACGACGGTGACGCGGCTTCTCTTGGGGGCACGACCAGGCGACAGCGCAACCCAGCGCAGATCTGCAATATTACCCACCTCCGGCGTTTGATCGCCTACGCAACAACGTATCTCGGCGACACTCGGATCTGCAACGCCCTCACCCTCGGGTCGCTGGATCTGGCTACACACACACCTCGACGGCCCGATCTACGGCGTAAACTCATTTGGACGACGATCGAGACTCGCGGTAAGTAACTCAGTGCCTCAGTTCTCCTTCAGTTACGATTTCGCAAGATCCAAGTCGGCAGGGACGGTTTCAGGAACTCAAACAATTAGCAATTGACGCGCATTAAGAAGGAACATAGTAGTATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTTCTAATACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCGTTGGAGGTTACAAACATGAGCAAATTGATGGACCGAGTGATTTCTGTGGAATATGCTGTTCGAGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGGAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGACTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCTGATTATGGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAAAGATCAAGTGACCATACTAGGGCTCCCAGCCGCAGTCCTCTCCATCAGAGGGAAAGACCAAATGGTGACCGAATCCCCAACCGAAGTCCTAGTCCTTACAGGAGAGAGAGGGAGAGGAGGAGTCCTATTGATGATGGACGTGGCACAAGCTATAGTCCTCGTGATAGAGAAAGGTCGAACCCGGACAACGGCCATGATCACCAGGAGAATACAGTAGCTGAACCCGGTGAGTGCCCCAGTTACAGTGGCACTCAGAGCCCGAAGCATCGGGGATATAACAGCAGCCGTTCACCACAAGCAGAGGAATGATGAACTAGAAAATGGGAAGTGACATCGATGATCTCATTTGCTTCAGAGTACGTTTAGTTGTATAATCAGTATTAGTGGTAAACACATGTATTTGTAAGGATAAAGTTTCATTTGTGGTTCTTCAGTTTGTAGCGATTCTATGGATATGCTGTTGCCAGATTTTAGTTAACAATCAAAATACACAGCACTCTGATCTTTAGCTAGTTGTGAGTGACGTTGGCTTTTGGCAGTTTAAAAGCACTTTTCAAAATTATTGTTCATACTGTTTGAGTTTTTCAAGGAGG

Coding sequence (CDS)

ATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTTCTAATACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCGTTGGAGGTTACAAACATGAGCAAATTGATGGACCGAGTGATTTCTGTGGAATATGCTGTTCGAGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGGAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGACTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCTGATTATGGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAAAGATCAAGTGACCATACTAGGGCTCCCAGCCGCAGTCCTCTCCATCAGAGGGAAAGACCAAATGGTGACCGAATCCCCAACCGAAGTCCTAGTCCTTACAGGAGAGAGAGGGAGAGGAGGAGTCCTATTGATGATGGACGTGGCACAAGCTATAGTCCTCGTGATAGAGAAAGGTCGAACCCGGACAACGGCCATGATCACCAGGAGAATACAGTAGCTGAACCCGGTGAGTGCCCCAGTTACAGTGGCACTCAGAGCCCGAAGCATCGGGGATATAACAGCAGCCGTTCACCACAAGCAGAGGAATGA

Protein sequence

MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

Homology

[Close]

BLAST of IVF0009938 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-109
Identity = 231/369 (62.60%), Postives = 274/369 (74.25%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTK ER      GG   SGGGSRRSSS+ RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRKGRRLRVEWTKSER------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + 
Sbjct: 121 EKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRTSPDYGSRRSPSPY 240
           NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++RTSPDYG RRSPSPY
Sbjct: 181 NGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPY 300
           ++ R RGSP+YGR R    SP RRER  S       SRSP ++RER + +  P +  SP 
Sbjct: 241 KKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKESPR 300

Query: 301 RRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
               E  SPI+         R+R RS+P+NG      ++        Y G +SP  +   
Sbjct: 301 NGVGEVESPIE--------RRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS-R 350

Query: 361 SSRSPQAEE 369
           S RSP A+E
Sbjct: 361 SPRSPPADE 350

[Close]

BLAST of IVF0009938 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 387.5 bits (994), Expect = 1.7e-106
Identity = 231/374 (61.76%), Postives = 265/374 (70.86%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GR GRRLRVEWTK +R       GG G  GGSRRSSS  RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRTGRRLRVEWTKNDR-------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + 
Sbjct: 121 ERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYG-SRRSPSPY 240
           NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+RTSPDYG  RRSPSPY
Sbjct: 181 NGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRER-----PNGDRIPNR 300
           +R R   SPDY      K    RRER  S ++    +RSP   R       P   R  +R
Sbjct: 241 KRARL--SPDY------KRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESR 300

Query: 301 SPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPK 360
           SP PY + RE RSP    +    S R R +S+P+NG       + E      Y G  SP 
Sbjct: 301 SPPPYEKRRESRSPPPYEKRRERS-RSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPI 356

Query: 361 HRGYNSSRSPQAEE 369
               + SRSP AEE
Sbjct: 361 RE--SPSRSPPAEE 356

[Close]

BLAST of IVF0009938 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 3.7e-69
Identity = 165/292 (56.51%), Postives = 197/292 (67.47%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDER+AEDAI  LD   F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           G + RRL VEW K ERG  RP         G  ++ SN +P+KTLFVINFDP  T+  D+
Sbjct: 61  GYEKRRLSVEWAKGERG--RPR--------GDAKAPSNLKPTKTLFVINFDPIRTKEHDI 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HF+PYGK+ NVRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE+ 
Sbjct: 121 EKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDER- 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSP---- 240
                DRN  RSP   RRS SP  R R SPDYG     SP + +R SPDYG  RSP    
Sbjct: 181 ----DDRNGGRSP---RRSLSPVYRRRPSPDYGR--RPSPGQGRRPSPDYGRARSPEYDR 240

Query: 241 --SPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERP 287
              P   ER R SPDYGR    + S Y R+R    D  R  SRSP+  R RP
Sbjct: 241 YKGPAAYERRR-SPDYGR----RSSDYGRQRSPGYDRYR--SRSPV-PRGRP 264

[Close]

BLAST of IVF0009938 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.6e-64
Identity = 146/286 (51.05%), Postives = 187/286 (65.38%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+ ++ GNF+YD R  DLERLFS++G+V RVDMKSG+AF+Y EDER+AEDAI   D   F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GRKGRRLRVEWTKQERGIR-RPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRD 120
           G   R+L VEW K  +G R +P  G         ++ SN RP+KTLFVINFDP  TR RD
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG---------KAVSNQRPTKTLFVINFDPIRTRERD 120

Query: 121 LERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEK 180
           +ERHF+PYGK+LNVR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  E+
Sbjct: 121 MERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGER 180

Query: 181 RNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPY 240
            + Y        +  R+RRSPSP  R R SPDY           +R SP+Y   + P+PY
Sbjct: 181 EDRY--------AGSRRRRSPSPVYRRRPSPDY----------TRRRSPEYDRYKGPAPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRER 286
           +R   R SPDYGR              RSSD+ RA +RSP + R R
Sbjct: 241 ER---RKSPDYGR--------------RSSDYGRARARSPGYDRSR 242

[Close]

BLAST of IVF0009938 vs. ExPASy Swiss-Prot
Match: O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.0e-15
Identity = 91/299 (30.43%), Postives = 136/299 (45.48%), Query Frame = 0


Query: 2   KPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDEREAEDAIHALD 61
           + ++ GN   D R+ ++E LFS+YG V ++D+K      G+AF+  +D R+AEDAIH  D
Sbjct: 7   RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRD 66

Query: 62  RREFGRKGRRLRVEW-------TKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVIN 121
             +F   G RLRVE        +   RG     G GGG G G   S   +R S+   ++ 
Sbjct: 67  GYDF--DGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVT 126

Query: 122 FDPYHTRIRDLERHFDPYGKILNVRIRRN----FAFVQYELQEDATRALEVTNMSKLMDR 181
             P     +DL+ H    G +   ++ R+       V Y   ED   AL+  + ++  + 
Sbjct: 127 GLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNA 186

Query: 182 VISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSP-YRRQ 241
             +    VR+ D +++  SP R R  S  R R       R R         SRSP  +  
Sbjct: 187 FSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKAKSS 246

Query: 242 RTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQR 284
           R SP   + RSP P  + R   SP   R RS    P  ++    S    +P++SP+H R
Sbjct: 247 RRSPAKSTSRSPGPRSKSRS-PSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIHTR 299

[Close]

BLAST of IVF0009938 vs. ExPASy TrEMBL
Match: A0A1S3BL99 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491066 PE=4 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 6.9e-204
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR
Sbjct: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 368

[Close]

BLAST of IVF0009938 vs. ExPASy TrEMBL
Match: A0A1S3BLX3 (serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491066 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 3.8e-202
Identity = 367/368 (99.73%), Postives = 367/368 (99.73%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR
Sbjct: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 
Sbjct: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN- 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of IVF0009938 vs. ExPASy TrEMBL
Match: A0A0A0L7I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 2.2e-194
Identity = 356/368 (96.74%), Postives = 357/368 (97.01%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS+NTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSPYR
Sbjct: 241 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERER SPI  GRG SYSPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERGSPI-GGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of IVF0009938 vs. ExPASy TrEMBL
Match: A0A5D3BC56 (Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002150 PE=4 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 8.2e-181
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 37  FAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS 96
           FAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS
Sbjct: 45  FAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS 104

Query: 97  SNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEV 156
           SNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEV
Sbjct: 105 SNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEV 164

Query: 157 TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI 216
           TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI
Sbjct: 165 TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI 224

Query: 217 SRSPYRRQRTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS 276
           SRSPYRRQRTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS
Sbjct: 225 SRSPYRRQRTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS 284

Query: 277 RSPLHQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQEN 336
           RSPLHQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQEN
Sbjct: 285 RSPLHQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQEN 344

Query: 337 TVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE 369
           TVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
Sbjct: 345 TVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE 376

[Close]

BLAST of IVF0009938 vs. ExPASy TrEMBL
Match: A0A1S4DXA2 (serine/arginine-rich splicing factor RS40-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491066 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.1e-177
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0


Query: 42  MEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRP 101
           MEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRP
Sbjct: 1   MEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRP 60

Query: 102 SKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSK 161
           SKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSK
Sbjct: 61  SKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSK 120

Query: 162 LMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPY 221
           LMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPY
Sbjct: 121 LMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPY 180

Query: 222 RRQRTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLH 281
           RRQRTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLH
Sbjct: 181 RRQRTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLH 240

Query: 282 QRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEP 341
           QRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEP
Sbjct: 241 QRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEP 300

Query: 342 GECPSYSGTQSPKHRGYNSSRSPQAEE 369
           GECPSYSGTQSPKHRGYNSSRSPQAEE
Sbjct: 301 GECPSYSGTQSPKHRGYNSSRSPQAEE 327

[Close]

BLAST of IVF0009938 vs. NCBI nr
Match: XP_008449096.1 (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo])

HSP 1 Score: 718 bits (1853), Expect = 9.77e-261
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR
Sbjct: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 368
           SRSPQAEE
Sbjct: 361 SRSPQAEE 368

[Close]

BLAST of IVF0009938 vs. NCBI nr
Match: XP_008449098.1 (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X2 [Cucumis melo])

HSP 1 Score: 712 bits (1838), Expect = 1.82e-258
Identity = 367/368 (99.73%), Postives = 367/368 (99.73%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR
Sbjct: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 368
            RSPQAEE
Sbjct: 361 -RSPQAEE 367

[Close]

BLAST of IVF0009938 vs. NCBI nr
Match: XP_011650502.1 (serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus])

HSP 1 Score: 686 bits (1771), Expect = 2.96e-248
Identity = 356/368 (96.74%), Postives = 357/368 (97.01%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS+NTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSPYR
Sbjct: 241 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERER SPI  GRG SYSPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERGSPIG-GRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 368
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of IVF0009938 vs. NCBI nr
Match: KAE8650115.1 (hypothetical protein Csa_009778 [Cucumis sativus])

HSP 1 Score: 686 bits (1771), Expect = 4.64e-248
Identity = 356/368 (96.74%), Postives = 357/368 (97.01%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 13  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 72

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS+NTRPSKTLFVINFDPYHTRIRDL
Sbjct: 73  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 132

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 133 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 192

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQ
Sbjct: 193 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 252

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSPYR
Sbjct: 253 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 312

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERER SPI  GRG SYSPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 313 RERERGSPIG-GRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 372

Query: 361 SRSPQAEE 368
           SRSPQAEE
Sbjct: 373 SRSPQAEE 379

[Close]

BLAST of IVF0009938 vs. NCBI nr
Match: XP_011650503.1 (serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus])

HSP 1 Score: 681 bits (1756), Expect = 5.51e-246
Identity = 355/368 (96.47%), Postives = 356/368 (96.74%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS+NTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSPYR
Sbjct: 241 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERER SPI  GRG SYSPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERGSPIG-GRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 368
            RSPQAEE
Sbjct: 361 -RSPQAEE 366

[Close]

BLAST of IVF0009938 vs. TAIR 10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 397.5 bits (1020), Expect = 1.2e-110
Identity = 231/369 (62.60%), Postives = 274/369 (74.25%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTK ER      GG   SGGGSRRSSS+ RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRKGRRLRVEWTKSER------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + 
Sbjct: 121 EKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRTSPDYGSRRSPSPY 240
           NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++RTSPDYG RRSPSPY
Sbjct: 181 NGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPY 300
           ++ R RGSP+YGR R    SP RRER  S       SRSP ++RER + +  P +  SP 
Sbjct: 241 KKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKESPR 300

Query: 301 RRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
               E  SPI+         R+R RS+P+NG      ++        Y G +SP  +   
Sbjct: 301 NGVGEVESPIE--------RRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS-R 350

Query: 361 SSRSPQAEE 369
           S RSP A+E
Sbjct: 361 SPRSPPADE 350

[Close]

BLAST of IVF0009938 vs. TAIR 10
Match: AT4G25500.4 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 397.5 bits (1020), Expect = 1.2e-110
Identity = 231/369 (62.60%), Postives = 274/369 (74.25%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTK ER      GG   SGGGSRRSSS+ RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRKGRRLRVEWTKSER------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + 
Sbjct: 121 EKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRTSPDYGSRRSPSPY 240
           NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++RTSPDYG RRSPSPY
Sbjct: 181 NGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPY 300
           ++ R RGSP+YGR R    SP RRER  S       SRSP ++RER + +  P +  SP 
Sbjct: 241 KKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKESPR 300

Query: 301 RRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
               E  SPI+         R+R RS+P+NG      ++        Y G +SP  +   
Sbjct: 301 NGVGEVESPIE--------RRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS-R 350

Query: 361 SSRSPQAEE 369
           S RSP A+E
Sbjct: 361 SPRSPPADE 350

[Close]

BLAST of IVF0009938 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 388.3 bits (996), Expect = 7.0e-108
Identity = 232/374 (62.03%), Postives = 266/374 (71.12%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GR GRRLRVEWTK +R       GG G  GGSRRSSS  RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRTGRRLRVEWTKNDR-------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + 
Sbjct: 121 ERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYG-SRRSPSPY 240
           NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+RTSPDYG  RRSPSPY
Sbjct: 181 NGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRER-----PNGDRIPNR 300
           +R R   SPDY      K    RRER  S ++    +RSP   R       P   R  +R
Sbjct: 241 KRARL--SPDY------KRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESR 300

Query: 301 SPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPK 360
           SP PY + RE RSP    +    S R R +S+P+NG       + E      Y G  SP 
Sbjct: 301 SPPPYEKRRESRSPPPYEKRRERS-RSRSKSSPENGQVESPGQIMEVEAGRGYDGADSP- 357

Query: 361 HRGYNSSRSPQAEE 369
            R  + SRSP AEE
Sbjct: 361 IRESSPSRSPPAEE 357

[Close]

BLAST of IVF0009938 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-107
Identity = 231/374 (61.76%), Postives = 265/374 (70.86%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GR GRRLRVEWTK +R       GG G  GGSRRSSS  RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRTGRRLRVEWTKNDR-------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + 
Sbjct: 121 ERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYG-SRRSPSPY 240
           NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+RTSPDYG  RRSPSPY
Sbjct: 181 NGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRER-----PNGDRIPNR 300
           +R R   SPDY      K    RRER  S ++    +RSP   R       P   R  +R
Sbjct: 241 KRARL--SPDY------KRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESR 300

Query: 301 SPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPK 360
           SP PY + RE RSP    +    S R R +S+P+NG       + E      Y G  SP 
Sbjct: 301 SPPPYEKRRESRSPPPYEKRRERS-RSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPI 356

Query: 361 HRGYNSSRSPQAEE 369
               + SRSP AEE
Sbjct: 361 RE--SPSRSPPAEE 356

[Close]

BLAST of IVF0009938 vs. TAIR 10
Match: AT4G25500.3 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 333.6 bits (854), Expect = 2.1e-91
Identity = 203/334 (60.78%), Postives = 241/334 (72.16%), Query Frame = 0


Query: 36  GFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRS 95
           GFAF+YMEDER+AEDAI ALDR EFGRKGRRLRVEWTK ER      GG   SGGGSRRS
Sbjct: 3   GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSER------GGDKRSGGGSRRS 62

Query: 96  SSNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE 155
           SS+ RPSKTLFVINFD  +TR RDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+
Sbjct: 63  SSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALD 122

Query: 156 VTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNG 215
            +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G
Sbjct: 123 ASNNSKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRG 182

Query: 216 ISR-SPYRRQRTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRA 275
            S  + YR++RTSPDYG RRSPSPY++ R RGSP+YGR R    SP RRER  S      
Sbjct: 183 ASPVAAYRKERTSPDYGRRRSPSPYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY-- 242

Query: 276 PSRSPLHQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQ 335
            SRSP ++RER + +  P +  SP     E  SPI+         R+R RS+P+NG    
Sbjct: 243 -SRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIE--------RRERSRSSPENGQVES 302

Query: 336 ENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE 369
             ++        Y G +SP  +   S RSP A+E
Sbjct: 303 PGSIGRRDSDGGYDGAESPMQKS-RSPRSPPADE 317

The following BLAST results are available for this feature:

BLAST of IVF0009938 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92965	1.6e-109	62.60	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92966	1.7e-106	61.76	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92964	3.7e-69	56.51	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	3.6e-64	51.05	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
O22315	1.0e-15	30.43	Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]

BLAST of IVF0009938 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BL99	6.9e-204	100.00	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A1S3BLX3	3.8e-202	99.73	serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucumis melo OX=365...	[more]
A0A0A0L7I3	2.2e-194	96.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1	[more]
A0A5D3BC56	8.2e-181	100.00	Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A1S4DXA2	1.1e-177	100.00	serine/arginine-rich splicing factor RS40-like isoform X3 OS=Cucumis melo OX=365...	[more]

BLAST of IVF0009938 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449096.1	9.77e-261	100.00	PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis me...	[more]
XP_008449098.1	1.82e-258	99.73	PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X2 [Cucumis me...	[more]
XP_011650502.1	2.96e-248	96.74	serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus]	[more]
KAE8650115.1	4.64e-248	96.74	hypothetical protein Csa_009778 [Cucumis sativus]	[more]
XP_011650503.1	5.51e-246	96.47	serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]	[more]

BLAST of IVF0009938 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25500.1	1.2e-110	62.60	arginine/serine-rich splicing factor 35	[more]
AT4G25500.4	1.2e-110	62.60	arginine/serine-rich splicing factor 35	[more]
AT5G52040.2	7.0e-108	62.03	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.1	1.2e-107	61.76	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G25500.3	2.1e-91	60.78	arginine/serine-rich splicing factor 35	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 104..170 e-value: 1.6E-15 score: 67.6 coord: 3..70 e-value: 7.0E-15 score: 65.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 4..62 e-value: 1.1E-12 score: 47.6 coord: 105..167 e-value: 2.0E-11 score: 43.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 103..174 score: 14.896925
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..74 score: 16.3978
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 97..186 e-value: 1.4E-19 score: 72.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..96 e-value: 1.2E-19 score: 72.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..338
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 4..212
None	No IPR available	PANTHER	PTHR23147:SF165	BNAC01G41640D PROTEIN	coord: 4..212
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009938.4	IVF0009938.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding