IVF0009891 (gene) Melon (IVF77) v1

Overview


Name	IVF0009891
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Auxin-responsive protein
Location	chr03: 23169252 .. 23170840 (+)
RNA-Seq Expression	IVF0009891
Synteny	IVF0009891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTACAACTTGGCCTTTCTCTTCCCCTTCACAACCACCCCAATATTCATTGCAAGCCAGCTGGTGGTTTGAACATCATCCACTATTCGTTATTGAAAATGAGCTTCCTCAAACTTTGCCTTTGCTTTCTTGGAATGATAAGCCCAAGGATGAAGATGACCCTCACCACCCTAAAGGAACACATTTTTGCAACATTCAAAAGTGGTCCAAACAAATATATATAAAAAGATAGAACCATCTTCTTTTGATCTCTATTTCATAATAATTTATGTGTCATTTAGTATATGCTGGTATTGACAGACTCACTTGTTACATGGTCGGAACTTCATGTTGATCTGTGATTTCAATTATGTCACAAATTCGTATAGGAAAGACGAAGAGAAGAAGCAAGCAGTAGGATGGCCACCCATTGAGTCATGGAGGAAGAAGGCCTTCCATTGGCACACTCAACCTCCGCAAACGATAGACAATCGTCGTCCTATAGTAGCAGATCATCAAAGTAACCAAAATGGTGGACAAAATTCATTATTCGTGAAAGTGAAAATGGAAGGGGTAGCAATAGCAAGGAAACTCGACTTAAAGCTCTATCACTCTCATCACTCTCTCAAAACTGCTCTCATCACCATGTTCACCACAAGTAATTCTAAATTTCCTTACACATTTAGTGCTAATAATATATATACAACAATTCTTTAAATAATTGCAACTATAGCAAAAAATATATCAACTAGATTCCTTGTTAACACCATAACAATGTTGCTATATCTAAAATTCTTTCACATTGATTGAGTTATATCCGCTGGTGTAACATACCAGATAAGGGAATGGATAACAACGATTGGGATTTTACGCTGATCTATGAAGACGAAGATGGTGATTGGATGCTTGCAGAAGATCTTCCATGGAAGTTAGTTCTTAACTTTCTTTTTTTGTTTTTCCATCGTGATCATGTTTTATTTATAATATATTTTTAATTTTGGCAGTTCCTTCGTCGAGTCTGCACAGCGCCTCAAGATTCTGGTTCGCAAGAGAAACAAAGAATGAAGTTGCATATATTATTATCATTATTATTGTTTCCGAATCTTAATATTCCACATGTATGTAAGCATATATATATATATACACATTATATTCTAAACTGGCTTGATGTGTTTGCTTCTTCTATATTACTTACAACCAATTATTAATATTTTCCTTTGCTGCTAAAGTGTGGACCTGTGTGGTCGAAATTTTTCTATAAAAATAATTCTTTCTTTCTTCTATCCCAGATAATGAGGTGAAGGTCCCTGTCCTACAACTTGATCAATAAATTACGGATAAAATTATTTTTTCAATGCCGTTTAAAGTGAACTCAAACCTAATTAATCATTCAAATCAAATGTTACCAGTGAATGTTAATTAATAGTTTTCAAAACAATTAACTCTCTGCTATATCTCTAATAAATGAAGGATCTATTTCAGAAAATCAAATATTTTGAGATTACTAGAAACTCTTGTACCAAATTGTAATTTAAAGTAGTATAACTCTTCTATACATTTGATTTTAGTTTACCATGATCATTATACTTGCAAATGTTTATTTTGA

mRNA sequence

ATGGAGCTACAACTTGGCCTTTCTCTTCCCCTTCACAACCACCCCAATATTCATTGCAAGCCAGCTGGTGGTTTGAACATCATCCACTATTCGTTATTGAAAATGAGCTTCCTCAAACTTTGCCTTTGCTTTCTTGGAATGATAAGCCCAAGGATGAAGATGACCCTCACCACCCTAAAGGAACACATTTTTGCAACATTCAAAAGTGACGAAGAGAAGAAGCAAGCAGTAGGATGGCCACCCATTGAGTCATGGAGGAAGAAGGCCTTCCATTGGCACACTCAACCTCCGCAAACGATAGACAATCGTCGTCCTATAGTAGCAGATCATCAAAGTAACCAAAATGGTGGACAAAATTCATTATTCGTGAAAGTGAAAATGGAAGGGGTAGCAATAGCAAGGAAACTCGACTTAAAGCTCTATCACTCTCATCACTCTCTCAAAACTGCTCTCATCACCATGTTCACCACAAATAAGGGAATGGATAACAACGATTGGGATTTTACGCTGATCTATGAAGACGAAGATGGTGATTGGATGCTTGCAGAAGATCTTCCATGGAAGTTATATAACTCTTCTATACATTTGATTTTAGTTTACCATGATCATTATACTTGCAAATGTTTATTTTGA

Coding sequence (CDS)

ATGGAGCTACAACTTGGCCTTTCTCTTCCCCTTCACAACCACCCCAATATTCATTGCAAGCCAGCTGGTGGTTTGAACATCATCCACTATTCGTTATTGAAAATGAGCTTCCTCAAACTTTGCCTTTGCTTTCTTGGAATGATAAGCCCAAGGATGAAGATGACCCTCACCACCCTAAAGGAACACATTTTTGCAACATTCAAAAGTGACGAAGAGAAGAAGCAAGCAGTAGGATGGCCACCCATTGAGTCATGGAGGAAGAAGGCCTTCCATTGGCACACTCAACCTCCGCAAACGATAGACAATCGTCGTCCTATAGTAGCAGATCATCAAAGTAACCAAAATGGTGGACAAAATTCATTATTCGTGAAAGTGAAAATGGAAGGGGTAGCAATAGCAAGGAAACTCGACTTAAAGCTCTATCACTCTCATCACTCTCTCAAAACTGCTCTCATCACCATGTTCACCACAAATAAGGGAATGGATAACAACGATTGGGATTTTACGCTGATCTATGAAGACGAAGATGGTGATTGGATGCTTGCAGAAGATCTTCCATGGAAGTTATATAACTCTTCTATACATTTGATTTTAGTTTACCATGATCATTATACTTGCAAATGTTTATTTTGA

Protein sequence

MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLKEHIFATFKSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDEDGDWMLAEDLPWKLYNSSIHLILVYHDHYTCKCLF

Homology

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BLAST of IVF0009891 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 78/260 (30.00%), Postives = 117/260 (45.00%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHP--------NIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRM 60
           MEL LGLSL  H           N HC   G  + +    L+          LG +    
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFE----ATFGLGNVEENC 60

Query: 61  KMTLTTLKEHIFA-------------------TFKSDEEKKQAVGWPPIE-------SWR 120
            M     K+ +FA                    +  +EE  + VGWPP++       S+ 
Sbjct: 61  YMP----KQRLFALNGQPNEEDEDPLESESSIVYDDEEENSEVVGWPPVKTCMIKYGSYH 120

Query: 121 KKAFHWHTQPPQTIDNRR-------------PIVADHQSNQNGGQNSLFVKVKMEGVAIA 180
            +    H   P     RR               V    S+    ++S++VKVKM+GVAIA
Sbjct: 121 HRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIA 180

Query: 181 RKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDEDGDWMLAEDLPWKLYNSS 211
           RK+D+KL++S+ SL  +LITMFT  +  D  D ++T  ++ ++GDW+L  D+ WK++  S
Sbjct: 181 RKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAES 240

[Close]

BLAST of IVF0009891 vs. ExPASy Swiss-Prot
Match: A2XLV9 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.4e-18
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 68  KSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQ-----SNQNGGQNSLF 127
           K    K QAVGWPP+ S+R+     +    Q++ +++   AD Q     +N +G  +S F
Sbjct: 79  KPPAPKAQAVGWPPVRSFRR-----NIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAF 138

Query: 128 VKVKMEGVAIARKLDLKLYHSHHSLKTALITMF-----TTNKGMDNNDWDFTLIYEDEDG 187
           VKV M+G    RK+DLK+Y+S+  L  AL  MF     T N   + N  D    YED+DG
Sbjct: 139 VKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMNEVNGSDAVTTYEDKDG 198

Query: 188 DWMLAEDLPWKLYNSS 194
           DWML  D+PW+++  S
Sbjct: 199 DWMLVGDVPWQMFVES 209

[Close]

BLAST of IVF0009891 vs. ExPASy Swiss-Prot
Match: Q10D34 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.4e-18
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 68  KSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQ-----SNQNGGQNSLF 127
           K    K QAVGWPP+ S+R+     +    Q++ +++   AD Q     +N +G  +S F
Sbjct: 79  KPPAPKAQAVGWPPVRSFRR-----NIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAF 138

Query: 128 VKVKMEGVAIARKLDLKLYHSHHSLKTALITMF-----TTNKGMDNNDWDFTLIYEDEDG 187
           VKV M+G    RK+DLK+Y+S+  L  AL  MF     T N   + N  D    YED+DG
Sbjct: 139 VKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMNEVNGSDAVTTYEDKDG 198

Query: 188 DWMLAEDLPWKLYNSS 194
           DWML  D+PW+++  S
Sbjct: 199 DWMLVGDVPWQMFVES 209

[Close]

BLAST of IVF0009891 vs. ExPASy Swiss-Prot
Match: Q75GB1 (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16
Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 73  KKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNSLFVKVKMEGVAI 132
           K Q VGWPPI S+RK           T+   +   +   +    GQ  L+VKV M+G   
Sbjct: 114 KAQVVGWPPIRSYRK----------NTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPY 173

Query: 133 ARKLDLKLYHSHHSLKTALITM---FTTNK---GMDNNDWDFTLIYEDEDGDWMLAEDLP 192
            RK+DLK Y ++  L TAL  M   FTT K        D ++ L YED+DGDWML  D+P
Sbjct: 174 LRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGLSESRKDGEYVLTYEDKDGDWMLVGDVP 230

Query: 193 WKLYNSS 194
           W+++ +S
Sbjct: 234 WEMFANS 230

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BLAST of IVF0009891 vs. ExPASy Swiss-Prot
Match: Q5NB25 (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA3 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-16
Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 73  KKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNSLFVKVKMEGVAI 132
           K Q VGWPPI S+RK     +T     I + +  V   Q     GQ  L+VKV M+G   
Sbjct: 121 KAQVVGWPPIRSYRK-----NTMATNQIKSNKEDVDAKQ-----GQGFLYVKVSMDGAPY 180

Query: 133 ARKLDLKLYHSHHSLKTALITMF----TTNKGMDN-NDWDFTLIYEDEDGDWMLAEDLPW 192
            RK+DLK Y ++  +   L  MF    T  +G +N  D ++ L YED+DGDWML  D+PW
Sbjct: 181 LRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPW 236

Query: 193 KLYNSS 194
           +++  S
Sbjct: 241 EMFTDS 236

[Close]

BLAST of IVF0009891 vs. ExPASy TrEMBL
Match: A0A5A7VD13 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002350 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 8.3e-77
Identity = 151/209 (72.25%), Postives = 155/209 (74.16%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLK 60
           MELQLGLSLPLHNHPNIHCKPAGG    H+ L              +I   +  TL  L 
Sbjct: 1   MELQLGLSLPLHNHPNIHCKPAGGFE--HHPLF-------------VIENELPQTLPLLS 60

Query: 61  ----------------EHIFATFKSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRR 120
                            H     K DEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRR
Sbjct: 61  WNDKPKDEDDPHHPKGTHFCNIQKKDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRR 120

Query: 121 PIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNN 180
           PIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNN
Sbjct: 121 PIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNN 180

Query: 181 DWDFTLIYEDEDGDWMLAEDLPWKLYNSS 194
           DWDFTLIYEDEDGDWMLAEDLPW  +  S
Sbjct: 181 DWDFTLIYEDEDGDWMLAEDLPWNSFVES 194

[Close]

BLAST of IVF0009891 vs. ExPASy TrEMBL
Match: A0A1S3BCX7 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488319 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 8.3e-77
Identity = 151/209 (72.25%), Postives = 155/209 (74.16%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLK 60
           MELQLGLSLPLHNHPNIHCKPAGG    H+ L              +I   +  TL  L 
Sbjct: 1   MELQLGLSLPLHNHPNIHCKPAGGFE--HHPLF-------------VIENELPQTLPLLS 60

Query: 61  ----------------EHIFATFKSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRR 120
                            H     K DEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRR
Sbjct: 61  WNDKPKDEDDPHHPKGTHFCNIQKKDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRR 120

Query: 121 PIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNN 180
           PIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNN
Sbjct: 121 PIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNN 180

Query: 181 DWDFTLIYEDEDGDWMLAEDLPWKLYNSS 194
           DWDFTLIYEDEDGDWMLAEDLPW  +  S
Sbjct: 181 DWDFTLIYEDEDGDWMLAEDLPWNSFVES 194

[Close]

BLAST of IVF0009891 vs. ExPASy TrEMBL
Match: A0A0A0LPM6 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G381840 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.6e-70
Identity = 143/198 (72.22%), Postives = 154/198 (77.78%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLK 60
           MELQLGLSLPLH+HPNIHCKPAGG    H  +L+    +     L ++S   K       
Sbjct: 1   MELQLGLSLPLHSHPNIHCKPAGGRFGDHSFILENELPQT----LPLLSWNDKPKDEDDP 60

Query: 61  EHIFATF-----KSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQN 120
            H   T      K DEEKKQAVGWPPIESWRKKAF WHTQPPQTI+NRRP VAD QSNQN
Sbjct: 61  HHPRGTHFCNIQKKDEEKKQAVGWPPIESWRKKAFDWHTQPPQTIENRRPAVAD-QSNQN 120

Query: 121 GGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDE 180
           GG+NSLFVKVKMEGVAIARKLDLKLYHSHHSLKTAL+TMFTTNKGMDN+DWDFTLIYEDE
Sbjct: 121 GGRNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALLTMFTTNKGMDNSDWDFTLIYEDE 180

Query: 181 DGDWMLAEDLPWKLYNSS 194
           DGDWMLAEDLPW  +  S
Sbjct: 181 DGDWMLAEDLPWNSFVES 193

[Close]

BLAST of IVF0009891 vs. ExPASy TrEMBL
Match: A0A6J1HG86 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462707 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 8.9e-47
Identity = 116/201 (57.71%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLK 60
           MELQLGLSLPLHN+   H  P  G N +  +L  +S+        G  SP  + T     
Sbjct: 1   MELQLGLSLPLHNYAFEH--PRIG-NELPQTLPLLSWNDKPKDDDG--SPHPEGT----- 60

Query: 61  EHIFATFKSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNS 120
            H     K DEEK  +VGWPPIE+WRKKA   H QPPQT++NR        SNQNGG NS
Sbjct: 61  -HFSTIQKEDEEKNPSVGWPPIETWRKKALLQHPQPPQTVENR--------SNQNGGPNS 120

Query: 121 LFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTN--KGMDNNDWDFTLIYEDEDGD 180
           LFVKVKMEGVAIARKLDL+LYHSH+SLKTALI MFTT+  + +DN  WDFTLIYEDEDGD
Sbjct: 121 LFVKVKMEGVAIARKLDLRLYHSHNSLKTALIAMFTTSNYEAIDNKCWDFTLIYEDEDGD 180

Query: 181 WMLAEDLPWKLYNSSIHLILV 200
           W+LAEDLPW  +  S+  + V
Sbjct: 181 WLLAEDLPWNSFVESVRRLKV 182

[Close]

BLAST of IVF0009891 vs. ExPASy TrEMBL
Match: A0A6J1K2I8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491815 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.6e-40
Identity = 89/140 (63.57%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 62  HIFATFKSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNSL 121
           H     K D+EK  +VGWPPIE+WRKKA   H QPP  ++NR        SNQNGG NSL
Sbjct: 44  HFSTIQKEDDEKNPSVGWPPIETWRKKALLQHPQPP--LENR--------SNQNGGPNSL 103

Query: 122 FVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTN--KGMDNNDWDFTLIYEDEDGDW 181
           FVKVKMEGVAIARKLDL+LYHSH+SLKTALI MFT +  + +DN  WDFTLIYEDEDGDW
Sbjct: 104 FVKVKMEGVAIARKLDLRLYHSHNSLKTALIAMFTASNYEAIDNKCWDFTLIYEDEDGDW 163

Query: 182 MLAEDLPWKLYNSSIHLILV 200
           +LAEDLPW  +  S+  + V
Sbjct: 164 LLAEDLPWNSFVESVRRLKV 173

[Close]

BLAST of IVF0009891 vs. NCBI nr
Match: XP_008445232.2 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo] >KAA0064917.1 auxin-responsive protein IAA29-like [Cucumis melo var. makuwa])

HSP 1 Score: 299 bits (765), Expect = 3.05e-100
Identity = 151/209 (72.25%), Postives = 155/209 (74.16%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLK 60
           MELQLGLSLPLHNHPNIHCKPAGG    H+ L              +I   +  TL  L 
Sbjct: 1   MELQLGLSLPLHNHPNIHCKPAGGFE--HHPLF-------------VIENELPQTLPLLS 60

Query: 61  ----------------EHIFATFKSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRR 120
                            H     K DEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRR
Sbjct: 61  WNDKPKDEDDPHHPKGTHFCNIQKKDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRR 120

Query: 121 PIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNN 180
           PIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNN
Sbjct: 121 PIVADHQSNQNGGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNN 180

Query: 181 DWDFTLIYEDEDGDWMLAEDLPWKLYNSS 193
           DWDFTLIYEDEDGDWMLAEDLPW  +  S
Sbjct: 181 DWDFTLIYEDEDGDWMLAEDLPWNSFVES 194

[Close]

BLAST of IVF0009891 vs. NCBI nr
Match: XP_004138851.1 (auxin-responsive protein IAA29 [Cucumis sativus] >KGN62959.1 hypothetical protein Csa_022378 [Cucumis sativus])

HSP 1 Score: 277 bits (708), Expect = 1.39e-91
Identity = 143/198 (72.22%), Postives = 154/198 (77.78%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLK 60
           MELQLGLSLPLH+HPNIHCKPAGG    H  +L+    +     L ++S   K       
Sbjct: 1   MELQLGLSLPLHSHPNIHCKPAGGRFGDHSFILENELPQT----LPLLSWNDKPKDEDDP 60

Query: 61  EHIFATF-----KSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQN 120
            H   T      K DEEKKQAVGWPPIESWRKKAF WHTQPPQTI+NRRP VAD QSNQN
Sbjct: 61  HHPRGTHFCNIQKKDEEKKQAVGWPPIESWRKKAFDWHTQPPQTIENRRPAVAD-QSNQN 120

Query: 121 GGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDE 180
           GG+NSLFVKVKMEGVAIARKLDLKLYHSHHSLKTAL+TMFTTNKGMDN+DWDFTLIYEDE
Sbjct: 121 GGRNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALLTMFTTNKGMDNSDWDFTLIYEDE 180

Query: 181 DGDWMLAEDLPWKLYNSS 193
           DGDWMLAEDLPW  +  S
Sbjct: 181 DGDWMLAEDLPWNSFVES 193

[Close]

BLAST of IVF0009891 vs. NCBI nr
Match: XP_038886196.1 (auxin-responsive protein IAA29-like [Benincasa hispida])

HSP 1 Score: 243 bits (620), Expect = 3.02e-78
Identity = 125/204 (61.27%), Postives = 142/204 (69.61%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLK 60
           MELQLGL LP HNHPNIH KPA     I  + L  +        L ++S   K       
Sbjct: 1   MELQLGLPLPFHNHPNIHHKPAFQDPFIIGNQLPQT--------LPLLSWNDKPKDQDDP 60

Query: 61  EHIFATF-----KSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQN 120
            H   T      K DEEKK+AVGWPPIESWRKK FHW  QPPQT +NRRP+VAD  SNQN
Sbjct: 61  PHPRGTHFSNIQKKDEEKKEAVGWPPIESWRKKVFHWQPQPPQTAENRRPVVADQSSNQN 120

Query: 121 GGQNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDE 180
            GQNSLFVKVKMEGVAIARKLDL+LYHSH SLKTALI MFTT K +D+N WDFT+IYED+
Sbjct: 121 DGQNSLFVKVKMEGVAIARKLDLRLYHSHQSLKTALIAMFTTYKAIDHNGWDFTIIYEDQ 180

Query: 181 DGDWMLAEDLPWKLYNSSIHLILV 199
           DGDW+LAEDLPW  +  S+  + +
Sbjct: 181 DGDWILAEDLPWNSFVESVQRLKI 196

[Close]

BLAST of IVF0009891 vs. NCBI nr
Match: KAG6598565.1 (Auxin-induced protein AUX28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199 bits (507), Expect = 2.74e-61
Identity = 116/201 (57.71%), Postives = 134/201 (66.67%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLK 60
           MELQLGLSLPLHN+   H  P  G N +  +L  +S+        G  SP    T     
Sbjct: 1   MELQLGLSLPLHNYALEH--PRIG-NELPQTLPLLSWNDKPKDDDG--SPHAGGT----- 60

Query: 61  EHIFATFKSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNS 120
            H     K DEEK  +VGWPPIE+WRKKA   H QPPQT++NR        SNQNGG NS
Sbjct: 61  -HFSTIQKEDEEKNPSVGWPPIETWRKKALLQHPQPPQTVENR--------SNQNGGPNS 120

Query: 121 LFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTN--KGMDNNDWDFTLIYEDEDGD 180
           LFVKVKMEGVAIARKLDL+LYHSH+SLKTALI MFTT+  + +DN  WDFTLIYEDEDGD
Sbjct: 121 LFVKVKMEGVAIARKLDLRLYHSHNSLKTALIAMFTTSNYEAIDNKGWDFTLIYEDEDGD 180

Query: 181 WMLAEDLPWKLYNSSIHLILV 199
           W+LAEDLPW  +  S+  + V
Sbjct: 181 WLLAEDLPWNSFVESVRRLKV 182

[Close]

BLAST of IVF0009891 vs. NCBI nr
Match: XP_022962174.1 (auxin-responsive protein IAA29-like [Cucurbita moschata])

HSP 1 Score: 199 bits (507), Expect = 2.74e-61
Identity = 116/201 (57.71%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLK 60
           MELQLGLSLPLHN+   H  P  G N +  +L  +S+        G  SP  + T     
Sbjct: 1   MELQLGLSLPLHNYAFEH--PRIG-NELPQTLPLLSWNDKPKDDDG--SPHPEGT----- 60

Query: 61  EHIFATFKSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNS 120
            H     K DEEK  +VGWPPIE+WRKKA   H QPPQT++NR        SNQNGG NS
Sbjct: 61  -HFSTIQKEDEEKNPSVGWPPIETWRKKALLQHPQPPQTVENR--------SNQNGGPNS 120

Query: 121 LFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTN--KGMDNNDWDFTLIYEDEDGD 180
           LFVKVKMEGVAIARKLDL+LYHSH+SLKTALI MFTT+  + +DN  WDFTLIYEDEDGD
Sbjct: 121 LFVKVKMEGVAIARKLDLRLYHSHNSLKTALIAMFTTSNYEAIDNKCWDFTLIYEDEDGD 180

Query: 181 WMLAEDLPWKLYNSSIHLILV 199
           W+LAEDLPW  +  S+  + V
Sbjct: 181 WLLAEDLPWNSFVESVRRLKV 182

[Close]

BLAST of IVF0009891 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 )

HSP 1 Score: 104.8 bits (260), Expect = 8.9e-23
Identity = 78/260 (30.00%), Postives = 117/260 (45.00%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHP--------NIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRM 60
           MEL LGLSL  H           N HC   G  + +    L+          LG +    
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFE----ATFGLGNVEENC 60

Query: 61  KMTLTTLKEHIFA-------------------TFKSDEEKKQAVGWPPIE-------SWR 120
            M     K+ +FA                    +  +EE  + VGWPP++       S+ 
Sbjct: 61  YMP----KQRLFALNGQPNEEDEDPLESESSIVYDDEEENSEVVGWPPVKTCMIKYGSYH 120

Query: 121 KKAFHWHTQPPQTIDNRR-------------PIVADHQSNQNGGQNSLFVKVKMEGVAIA 180
            +    H   P     RR               V    S+    ++S++VKVKM+GVAIA
Sbjct: 121 HRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIA 180

Query: 181 RKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDEDGDWMLAEDLPWKLYNSS 211
           RK+D+KL++S+ SL  +LITMFT  +  D  D ++T  ++ ++GDW+L  D+ WK++  S
Sbjct: 181 RKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAES 240

[Close]

BLAST of IVF0009891 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-16
Identity = 46/137 (33.58%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 73  KKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNSLFVKVKMEGVAI 132
           K Q VGWPP+ S+RK                  ++   Q +  G + + FVKV M+G   
Sbjct: 80  KAQVVGWPPVRSYRKN-----------------VMVSCQKSSGGPEAAAFVKVSMDGAPY 139

Query: 133 ARKLDLKLYHSHHSLKTALITMFTT--------NKGMDN-----------NDWDFTLIYE 191
            RK+DL++Y S+  L  AL  MF++         +GM +           N WD+   YE
Sbjct: 140 LRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYE 199

[Close]

BLAST of IVF0009891 vs. TAIR 10
Match: AT5G65670.1 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 48/138 (34.78%), Postives = 66/138 (47.83%), Query Frame = 0


Query: 73  KKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNSLFVKVKMEGVAI 132
           K Q VGWPP+ S+RK       +    +D R             G  +LFVKV M+G   
Sbjct: 181 KAQIVGWPPVRSYRKNTLATTCKNSDEVDGR------------PGSGALFVKVSMDGAPY 240

Query: 133 ARKLDLKLYHSHHSLKTALITMFTT-------NKGMDNNDW-------------DFTLIY 191
            RK+DL+ Y ++  L +AL  MFTT       + G    D              D+ L Y
Sbjct: 241 LRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTY 300

[Close]

BLAST of IVF0009891 vs. TAIR 10
Match: AT5G65670.2 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 48/138 (34.78%), Postives = 66/138 (47.83%), Query Frame = 0


Query: 73  KKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNSLFVKVKMEGVAI 132
           K Q VGWPP+ S+RK       +    +D R             G  +LFVKV M+G   
Sbjct: 181 KAQIVGWPPVRSYRKNTLATTCKNSDEVDGR------------PGSGALFVKVSMDGAPY 240

Query: 133 ARKLDLKLYHSHHSLKTALITMFTT-------NKGMDNNDW-------------DFTLIY 191
            RK+DL+ Y ++  L +AL  MFTT       + G    D              D+ L Y
Sbjct: 241 LRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTY 300

[Close]

BLAST of IVF0009891 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 71/221 (32.13%), Postives = 96/221 (43.44%), Query Frame = 0


Query: 4   QLGLSLPLHNHPNIHCKPAGGLNIIHYSLLKMSFLKLCLCFLGMISPRMKMTLTTLKEHI 63
           +L L LP  NH         G N       +   LKL L    M S   K+ L  +KE +
Sbjct: 8   ELRLGLPGGNHGG----EMAGKNNGKRGFSETVDLKLNLSSTAMDSV-SKVDLENMKEKV 67

Query: 64  FATFKSDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQNS--- 123
                    K Q VGWPP+ S+RK       Q P T D       D  S  +G  +S   
Sbjct: 68  V----KPPAKAQVVGWPPVRSFRKNVM--SGQKPTTGDATEG--NDKTSGSSGATSSASA 127

Query: 124 ----LFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTT-------NKGMDN------ 183
                +VKV M+G    RK+DLKLY ++  L  AL  MF++        +GM +      
Sbjct: 128 CATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESK 187

Query: 184 -----NDWDFTLIYEDEDGDWMLAEDLPWKLYNSSIHLILV 200
                N  D+   YED+DGDWML  D+PW+++  S   I +
Sbjct: 188 LIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRI 215

The following BLAST results are available for this feature:

BLAST of IVF0009891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WC4	1.2e-21	30.00	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=...	[more]
A2XLV9	6.4e-18	38.97	Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 P...	[more]
Q10D34	6.4e-18	38.97	Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13...	[more]
Q75GB1	1.2e-16	39.37	Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17...	[more]
Q5NB25	2.7e-16	39.68	Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA3 P...	[more]

BLAST of IVF0009891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VD13	8.3e-77	72.25	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BCX7	8.3e-77	72.25	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488319 PE=3 SV=1	[more]
A0A0A0LPM6	2.6e-70	72.22	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G381840 PE=3 SV=1	[more]
A0A6J1HG86	8.9e-47	57.71	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462707 PE=3 SV=1	[more]
A0A6J1K2I8	3.6e-40	63.57	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491815 PE=3 SV=1	[more]

BLAST of IVF0009891 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445232.2	3.05e-100	72.25	PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo] >KAA0064917.1 auxi...	[more]
XP_004138851.1	1.39e-91	72.22	auxin-responsive protein IAA29 [Cucumis sativus] >KGN62959.1 hypothetical protei...	[more]
XP_038886196.1	3.02e-78	61.27	auxin-responsive protein IAA29-like [Benincasa hispida]	[more]
KAG6598565.1	2.74e-61	57.71	Auxin-induced protein AUX28, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022962174.1	2.74e-61	57.71	auxin-responsive protein IAA29-like [Cucurbita moschata]	[more]

BLAST of IVF0009891 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32280.1	8.9e-23	30.00	indole-3-acetic acid inducible 29	[more]
AT1G04250.1	2.1e-16	33.58	AUX/IAA transcriptional regulator family protein	[more]
AT5G65670.1	1.4e-15	34.78	indole-3-acetic acid inducible 9	[more]
AT5G65670.2	1.4e-15	34.78	indole-3-acetic acid inducible 9	[more]
AT3G04730.1	1.2e-14	32.13	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 115..208 e-value: 1.9E-23 score: 84.3
None	No IPR available	PANTHER	PTHR31734:SF44	AUXIN-RESPONSIVE PROTEIN IAA29	coord: 65..199
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 114..193
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 67..157 e-value: 8.8E-21 score: 74.9 coord: 164..195 e-value: 2.9E-8 score: 33.9
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 65..199
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 120..202 score: 16.724148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009891.1	IVF0009891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding