IVF0009825 (gene) Melon (IVF77) v1

Overview


Name	IVF0009825
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr10: 8134173 .. 8134642 (-)
RNA-Seq Expression	IVF0009825
Synteny	IVF0009825

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTAGAAAAGGGAAGTGGTAGAGGAAGAACAAACTCTACTTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAAATATATATGCAATGGATTTAGGGTTTACCACGATAATCCGATCCAGATCAAGATTATACGGCATACGGATTGGATCTCCCACGGAGTCATCAACTCCACCTAGGTCTTCGACCAATCTTATCCGTCCTTCTGGTGGAATCATTCAAATGAGGCCTCCTGCCTCTCCTTCATCAAATAGGGAGTCTTCTACTTCTCCTACAACTTATTCTCAGGCTGTCACCCTCGATAAACGGTTTGTGCCAAGACCCGAGATCAAATCTTATTTTCAAAAGCCTATCGTTGTTTATGATCCTATCATAGAACCTGAATATCAAAGTCTCACTTTAGAAGGGACAGTTTCAAAAATCTTTCCGGAGGACTTTAA

mRNA sequence

ATGAGTTTAGAAAAGGGAAGTGGTAGAGGAAGAACAAACTCTACTTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAAATATATATGCAATGGATTTAGGGTTTACCACGATAATCCGATCCAGATCAAGATTATACGGCATACGGATTGGATCTCCCACGGAGTCATCAACTCCACCTAGGTCTTCGACCAATCTTATCCGTCCTTCTGGTGGAATCATTCAAATGAGGCCTCCTGCCTCTCCTTCATCAAATAGGGAGTCTTCTACTTCTCCTACAACTTATTCTCAGGCTGTCACCCTCGATAAACGGGACAGTTTCAAAAATCTTTCCGGAGGACTTTAA

Coding sequence (CDS)

ATGAGTTTAGAAAAGGGAAGTGGTAGAGGAAGAACAAACTCTACTTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAAATATATATGCAATGGATTTAGGGTTTACCACGATAATCCGATCCAGATCAAGATTATACGGCATACGGATTGGATCTCCCACGGAGTCATCAACTCCACCTAGGTCTTCGACCAATCTTATCCGTCCTTCTGGTGGAATCATTCAAATGAGGCCTCCTGCCTCTCCTTCATCAAATAGGGAGTCTTCTACTTCTCCTACAACTTATTCTCAGGCTGTCACCCTCGATAAACGGGACAGTTTCAAAAATCTTTCCGGAGGACTTTAA

Protein sequence

MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKRDSFKNLSGGL

Homology

[Close]

BLAST of IVF0009825 vs. ExPASy TrEMBL
Match: A0A5A7UCU9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00040 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.5e-57
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG
Sbjct: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKRDSFKNLS 120
           SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKRDSFKNLS
Sbjct: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKRDSFKNLS 120

Query: 121 GGL 124
           GGL
Sbjct: 121 GGL 123

[Close]

BLAST of IVF0009825 vs. ExPASy TrEMBL
Match: E5GCE6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.1e-39
Identity = 95/113 (84.07%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MS EKGS RGRTNSTSSKG+ PSSSSNS PSPMSA  Y MDLGFT + RSRSRL  I IG
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKR 114
           SPTESSTPPR S NLIRPSGG+IQMRPPASPSSNRESST PTTYSQAVTLDKR
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKR 113

[Close]

BLAST of IVF0009825 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 92/113 (81.42%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MS +KGS RGRTNSTSSKGN P SSSNSAPSP+SA+ YAMDLGFTT+ R  SR +GI IG
Sbjct: 1   MSSDKGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIG 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKR 114
           SPTESSTPPR STNLIRPS G++QMRPPASPSSNRESST PTTYSQAVT DKR
Sbjct: 61  SPTESSTPPRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKR 113

[Close]

BLAST of IVF0009825 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 92/113 (81.42%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MSLEK + RGRTNSTSSKGN PSSSSNS PSPMSA+ YAMDLGFTT+ RSRSR   IRIG
Sbjct: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKR 114
           SPTESSTPP+ STNLIRPSGG++QMR P SPSSNR+SST PTTYSQAVT DKR
Sbjct: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR 113

[Close]

BLAST of IVF0009825 vs. ExPASy TrEMBL
Match: A0A5A7URC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00720 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.5e-38
Identity = 91/113 (80.53%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MS EKGS RGRTNSTSSKGNHPSSSSNSA SPM+++ YAMDL FTT+ RSRSR   IR G
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKR 114
           SPTESSTPPR   NLIRPSGG++QMRPP SPSSNRESST PTTYSQAVT DKR
Sbjct: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKR 113

[Close]

BLAST of IVF0009825 vs. NCBI nr
Match: KAA0051485.1 (hypothetical protein E6C27_scaffold174G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (594), Expect = 5.93e-77
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG
Sbjct: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKRDSFKNLS 120
           SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKRDSFKNLS
Sbjct: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKRDSFKNLS 120

Query: 121 GGL 123
           GGL
Sbjct: 121 GGL 123

[Close]

BLAST of IVF0009825 vs. NCBI nr
Match: ADN34145.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 175 bits (444), Expect = 1.89e-53
Identity = 95/113 (84.07%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MS EKGS RGRTNSTSSKG+ PSSSSNS PSPMSA  Y MDLGFT + RSRSRL  I IG
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKR 113
           SPTESSTPPR S NLIRPSGG+IQMRPPASPSSNRESST PTTYSQAVTLDKR
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKR 113

[Close]

BLAST of IVF0009825 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 173 bits (438), Expect = 1.59e-52
Identity = 92/113 (81.42%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MSLEK + RGRTNSTSSKGN PSSSSNS PSPMSA+ YAMDLGFTT+ RSRSR   IRIG
Sbjct: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKR 113
           SPTESSTPP+ STNLIRPSGG++QMR P SPSSNR+SST PTTYSQAVT DKR
Sbjct: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR 113

[Close]

BLAST of IVF0009825 vs. NCBI nr
Match: KAA0056175.1 (hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 171 bits (432), Expect = 4.31e-52
Identity = 91/113 (80.53%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MS EKGS RGRTNSTSSKGNHPSSSSNSA SPM+++ YAMDL FTT+ RSRSR   IR G
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKR 113
           SPTESSTPPR   NLIRPSGG++QMRPP SPSSNRESST PTTYSQAVT DKR
Sbjct: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKR 113

[Close]

BLAST of IVF0009825 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 171 bits (432), Expect = 4.31e-52
Identity = 93/113 (82.30%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 1   MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIG 60
           MS EKGS RGRTNSTSSKGN PSSSSNSAPSPMSA+ Y MDLGFTT+IRSRSR   IR  
Sbjct: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60

Query: 61  SPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKR 113
           SPTESSTPPR   NLIRPSG ++QMRPPASPSSNRESST PTTYSQAVT DKR
Sbjct: 61  SPTESSTPPRPLANLIRPSGRVVQMRPPASPSSNRESSTPPTTYSQAVTPDKR 113

The following BLAST results are available for this feature:

BLAST of IVF0009825 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009825 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UCU9	9.5e-57	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
E5GCE6	3.1e-39	84.07	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7TM80	1.5e-38	81.42	Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7U8A0	1.5e-38	81.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7URC1	7.5e-38	80.53	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0009825 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051485.1	5.93e-77	100.00	hypothetical protein E6C27_scaffold174G00040 [Cucumis melo var. makuwa]	[more]
ADN34145.1	1.89e-53	84.07	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAA0049709.1	1.59e-52	81.42	hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]	[more]
KAA0056175.1	4.31e-52	80.53	hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]	[more]
TYK11076.1	4.31e-52	82.30	hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0009825 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009825.1	IVF0009825.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding