IVF0009724 (gene) Melon (IVF77) v1

Overview


Name	IVF0009724
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr08: 19255367 .. 19255648 (-)
RNA-Seq Expression	IVF0009724
Synteny	IVF0009724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGCTTTTATGTGCGTAAGCCACCAATAGTTGGAGAGGAAGAAGTGGATGGATTTGCTTCAATGAGTGAAACAACAACAAATACACAATCTATCGCACATACATCAAATAGGTCAAGTAAGAAAAGAGCAAGAAGTGTGGATCCATTGGTAGCGGCTGTGAATGGTCTTGAGAATGTTATGAGCAAACATCTTTCAAGTGCTAATGATAATATTCAAGAAACTACTGCATTTTATCGATATGTAGATGCCCGAGAGTCCACTAGAGAAGAACGTTGA

mRNA sequence

ATGGATGGCTTTTATGTGCGTAAGCCACCAATAGTTGGAGAGGAAGAAGTGGATGGATTTGCTTCAATGAGTGAAACAACAACAAATACACAATCTATCGCACATACATCAAATAGGTCAAGTAAGAAAAGAGCAAGAAGTGTGGATCCATTGGTAGCGGCTGTGAATGGTCTTGAGAATGTTATGAGCAAACATCTTTCAAGTGCTAATGATAATATTCAAGAAACTACTGCATTTTATCGATATGTAGATGCCCGAGAGTCCACTAGAGAAGAACGTTGA

Coding sequence (CDS)

ATGGATGGCTTTTATGTGCGTAAGCCACCAATAGTTGGAGAGGAAGAAGTGGATGGATTTGCTTCAATGAGTGAAACAACAACAAATACACAATCTATCGCACATACATCAAATAGGTCAAGTAAGAAAAGAGCAAGAAGTGTGGATCCATTGGTAGCGGCTGTGAATGGTCTTGAGAATGTTATGAGCAAACATCTTTCAAGTGCTAATGATAATATTCAAGAAACTACTGCATTTTATCGATATGTAGATGCCCGAGAGTCCACTAGAGAAGAACGTTGA

Protein sequence

MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPLVAAVNGLENVMSKHLSSANDNIQETTAFYRYVDARESTREER

Homology

[Close]

BLAST of IVF0009724 vs. ExPASy TrEMBL
Match: A0A5A7TE82 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002380 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.0e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPLVAAVNGLEN 60
           MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPLVAAVNGLEN
Sbjct: 10  MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPLVAAVNGLEN 69

Query: 61  VMSKHLSSANDNIQETTAFYRYVDARESTREER 94
           VMSKHLSSANDNIQETTAFYRYVDARESTREER
Sbjct: 70  VMSKHLSSANDNIQETTAFYRYVDARESTREER 102

[Close]

BLAST of IVF0009724 vs. ExPASy TrEMBL
Match: A0A0A0L2J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099560 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-12
Identity = 44/56 (78.57%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 1  MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSI-AHTSNRSSKKRARSVDPLVAAV 56
          MD FYV +PPI G EEVDG+ASMSE TTNTQS  AHTSNR SKKRARSVD LVA+V
Sbjct: 1  MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVASV 56

[Close]

BLAST of IVF0009724 vs. NCBI nr
Match: KAA0041258.1 (hypothetical protein E6C27_scaffold128G002380 [Cucumis melo var. makuwa])

HSP 1 Score: 179 bits (455), Expect = 1.40e-56
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPLVAAVNGLEN 60
           MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPLVAAVNGLEN
Sbjct: 10  MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPLVAAVNGLEN 69

Query: 61  VMSKHLSSANDNIQETTAFYRYVDARESTREER 93
           VMSKHLSSANDNIQETTAFYRYVDARESTREER
Sbjct: 70  VMSKHLSSANDNIQETTAFYRYVDARESTREER 102

[Close]

BLAST of IVF0009724 vs. NCBI nr
Match: KGN56195.1 (hypothetical protein Csa_009969 [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 8.59e-18
Identity = 44/56 (78.57%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 1  MDGFYVRKPPIVGEEEVDGFASMSETTTNTQSI-AHTSNRSSKKRARSVDPLVAAV 55
          MD FYV +PPI G EEVDG+ASMSE TTNTQS  AHTSNR SKKRARSVD LVA+V
Sbjct: 1  MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVASV 56

[Close]

BLAST of IVF0009724 vs. NCBI nr
Match: XP_038882353.1 (mitogen-activated protein kinase kinase kinase 3-like [Benincasa hispida])

HSP 1 Score: 66.6 bits (161), Expect = 1.60e-10
Identity = 34/46 (73.91%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 48 VDPLVAAVNGLENVMSKHLSSANDNIQETTAFYRYVDARESTREER 93
          +DPLV  VNGLENVMS HLS+ANDNIQE   FYR V  RESTRE R
Sbjct: 1  MDPLVTTVNGLENVMSSHLSNANDNIQEIAMFYRQVAERESTREAR 46

[Close]

BLAST of IVF0009724 vs. NCBI nr
Match: XP_038883815.1 (uncharacterized protein LOC120074677 [Benincasa hispida])

HSP 1 Score: 51.6 bits (122), Expect = 1.06e-05
Identity = 26/34 (76.47%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 3   GFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHT 36
           GFYV  PPIVG EEVDG  SMSE TTN QS AHT
Sbjct: 100 GFYVPDPPIVGGEEVDGPTSMSEATTNIQSSAHT 133

The following BLAST results are available for this feature:

BLAST of IVF0009724 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TE82	5.0e-42	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0L2J4	4.1e-12	78.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099560 PE=4 SV=1	[more]

BLAST of IVF0009724 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041258.1	1.40e-56	100.00	hypothetical protein E6C27_scaffold128G002380 [Cucumis melo var. makuwa]	[more]
KGN56195.1	8.59e-18	78.57	hypothetical protein Csa_009969 [Cucumis sativus]	[more]
XP_038882353.1	1.60e-10	73.91	mitogen-activated protein kinase kinase kinase 3-like [Benincasa hispida]	[more]
XP_038883815.1	1.06e-05	76.47	uncharacterized protein LOC120074677 [Benincasa hispida]	[more]

BLAST of IVF0009724 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009724.1	IVF0009724.1	mRNA