IVF0009682 (gene) Melon (IVF77) v1

Overview


Name	IVF0009682
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LOW QUALITY PROTEIN: ATP-dependent DNA helicase DDX11
Location	chr01: 31633010 .. 31634176 (-)
RNA-Seq Expression	IVF0009682
Synteny	IVF0009682

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCTCTTTACACTACAGGTAGTCAAAAACGAAGCATTCAAGCTCATGGGATTCCGTGCTACAAATTAACAAAGTTGAAGCGGTTAAGATTTTCAACTTTTAGAGAGAGAATGGCCCAAAAGGAAGGAGAGGAAGTTAAAGGCAAGACTTGGAATTTCCACCTACTCTGGCATGGTCTTTAGGTAACCACGAGAAACACGAATTGTCTCTTTCTTTCTTCTCTGTGTTGCAGAAATATTTAGTGAACAAAGCAAGAGAGAGAGAGGTAGAGAGGTTTCTTTCTTCTTGCAAACAGACCGAGAGTTAGCAAAGTTCTTTGATTTTTATACCACGCTATAGCAATAGCAACAACCAAATGCTGCTAAAAGAAACCATCCACAAAACCAACAACCTCTTCCATAAAACTCTTGAAAGCTTCAAGGATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTGATCACCTTCTCTTGCAGCAAAGGAAAGCCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTACGATGAGTGGCAGTCCACACTCCAAAAAGCTGCAAAGAGAAGCATTGACAAAGGCAGTGTGATCGCATCCAAGGAAAATGTGAAGCAAGAAGACACAATCGTTGCAATACAAAGCCCTCCAAGGAGCAAACAAGAGAAGGCTGTGAAAGAGAAGAAGAAACCAGGAGCTTCCCATCTTAGAAAAGGTGATGTTAAAAACAGTAGTACAAGAAGTAATGGTTTAGTAGAAAAAATGAAAGAATTGGAGATGCTGGATAGGAGTGATATGGAACAAGAATTGGATATAGAAGAAGCAATTCATTATTACTCTCGCCTTAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGCACTCAGAAATTTCTGTTCCTGAGCCTTCAGCTAGGAGTATGAACAGCTCAAAGAGAAGAATGGGGTCCATGAGATTATAGAATTTTTCATGTTAGTGAACTATATCTTTTACCTATTTTCCCCCCTTTTTTCCTTCTTTTTGGAAAATCTGGTTTGATTGTATTTCCATATTTGTATTCCTCTATTGCTTCTGAGAATATGCCTTTTTGTGTGATTACTGATTCATTGCCTCATTTTGTTCATTTCTGTATAAAAAGTTTCC

mRNA sequence

CTGCTCTTTACACTACAGGTAGTCAAAAACGAAGCATTCAAGCTCATGGGATTCCGTGCTACAAATTAACAAAGTTGAAGCGGTTAAGATTTTCAACTTTTAGAGAGAGAATGGCCCAAAAGGAAGGAGAGGAAGTTAAAGGCAAGACTTGGAATTTCCACCTACTCTGGCATGGTCTTTAGGTAACCACGAGAAACACGAATTGTCTCTTTCTTTCTTCTCTGTGTTGCAGAAATATTTAGTGAACAAAGCAAGAGAGAGAGAGGTAGAGAGGTTTCTTTCTTCTTGCAAACAGACCGAGAGTTAGCAAAGTTCTTTGATTTTTATACCACGCTATAGCAATAGCAACAACCAAATGCTGCTAAAAGAAACCATCCACAAAACCAACAACCTCTTCCATAAAACTCTTGAAAGCTTCAAGGATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTGATCACCTTCTCTTGCAGCAAAGGAAAGCCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTACGATGAGTGGCAGTCCACACTCCAAAAAGCTGCAAAGAGAAGCATTGACAAAGGCAGTGTGATCGCATCCAAGGAAAATGTGAAGCAAGAAGACACAATCGTTGCAATACAAAGCCCTCCAAGGAGCAAACAAGAGAAGGCTGTGAAAGAGAAGAAGAAACCAGGAGCTTCCCATCTTAGAAAAGGTGATGTTAAAAACAGTAGTACAAGAAGTAATGGTTTAGTAGAAAAAATGAAAGAATTGGAGATGCTGGATAGGAGTGATATGGAACAAGAATTGGATATAGAAGAAGCAATTCATTATTACTCTCGCCTTAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGCACTCAGAAATTTCTGTTCCTGAGCCTTCAGCTAGGAGTATGAACAGCTCAAAGAGAAGAATGGGGTCCATGAGATTATAGAATTTTTCATGTTAGTGAACTATATCTTTTACCTATTTTCCCCCCTTTTTTCCTTCTTTTTGGAAAATCTGGTTTGATTGTATTTCCATATTTGTATTCCTCTATTGCTTCTGAGAATATGCCTTTTTGTGTGATTACTGATTCATTGCCTCATTTTGTTCATTTCTGTATAAAAAGTTTCC

Coding sequence (CDS)

ATGCTGCTAAAAGAAACCATCCACAAAACCAACAACCTCTTCCATAAAACTCTTGAAAGCTTCAAGGATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTGATCACCTTCTCTTGCAGCAAAGGAAAGCCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTACGATGAGTGGCAGTCCACACTCCAAAAAGCTGCAAAGAGAAGCATTGACAAAGGCAGTGTGATCGCATCCAAGGAAAATGTGAAGCAAGAAGACACAATCGTTGCAATACAAAGCCCTCCAAGGAGCAAACAAGAGAAGGCTGTGAAAGAGAAGAAGAAACCAGGAGCTTCCCATCTTAGAAAAGGTGATGTTAAAAACAGTAGTACAAGAAGTAATGGTTTAGTAGAAAAAATGAAAGAATTGGAGATGCTGGATAGGAGTGATATGGAACAAGAATTGGATATAGAAGAAGCAATTCATTATTACTCTCGCCTTAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGCACTCAGAAATTTCTGTTCCTGAGCCTTCAGCTAGGAGTATGAACAGCTCAAAGAGAAGAATGGGGTCCATGAGATTATAG

Protein sequence

MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASHLRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSSKRRMGSMRL

Homology

[Close]

BLAST of IVF0009682 vs. ExPASy TrEMBL
Match: A0A5D3BXY4 (Putative ATP-dependent RNA helicase DDX11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002290 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60
           MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 210
           MDMHSEISVPEPSARSMNSSKRRMGSMRL
Sbjct: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 209

[Close]

BLAST of IVF0009682 vs. ExPASy TrEMBL
Match: A0A1S4E3Q5 (uncharacterized protein LOC107991904 OS=Cucumis melo OX=3656 GN=LOC107991904 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60
           MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 210
           MDMHSEISVPEPSARSMNSSKRRMGSMRL
Sbjct: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 209

[Close]

BLAST of IVF0009682 vs. ExPASy TrEMBL
Match: A0A0A0KAF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446870 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104
Identity = 200/209 (95.69%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60
           MLLK+TIHKTNNLFHKTLE+FK+LFFKGFQKLQKPTSLIT SCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGS+IASKENVKQEDT VAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKN+STRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 210
           MDMHSEISVPEPSARS+NSSKRR+GSMRL
Sbjct: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 209

[Close]

BLAST of IVF0009682 vs. ExPASy TrEMBL
Match: A0A6J1GQI6 (uncharacterized protein LOC111456559 OS=Cucurbita moschata OX=3662 GN=LOC111456559 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.2e-90
Identity = 181/210 (86.19%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60
           MLLKETI KT+NLFHKTL +FK LF KGFQKLQKPT LITFSCSK KPQHTHPTDRLYID
Sbjct: 1   MLLKETILKTSNLFHKTLGNFKCLFSKGFQKLQKPTCLITFSCSKRKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSV-IASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGAS 120
           FYDEWQS LQK+AKRSID GSV + +K+N+KQEDT VA QSPPRS+QEKAVKEKKKPG  
Sbjct: 61  FYDEWQSPLQKSAKRSIDGGSVMMTAKQNMKQEDTNVAKQSPPRSRQEKAVKEKKKPGRC 120

Query: 121 HLRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKF 180
           HLRKGDVKNSS RSNGL +KMKELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKF
Sbjct: 121 HLRKGDVKNSSMRSNGLAQKMKELEMLDRGDMEQELDIEEAIHYYSRLSSPVYLEIVDKF 180

Query: 181 FMDMHSEISVPEPSARSMNSSKRRMGSMRL 210
           FMD+HSE SVPEPSARSMNSSKRRMGSMRL
Sbjct: 181 FMDIHSEFSVPEPSARSMNSSKRRMGSMRL 210

[Close]

BLAST of IVF0009682 vs. ExPASy TrEMBL
Match: A0A6J1JPP9 (uncharacterized protein LOC111488716 OS=Cucurbita maxima OX=3661 GN=LOC111488716 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.5e-90
Identity = 179/209 (85.65%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60
           MLLKETI KT+NLFHKTL +FK LF KGFQKLQKPTSLITFSCSK KPQHTHPT+RLYID
Sbjct: 1   MLLKETILKTSNLFHKTLGNFKCLFSKGFQKLQKPTSLITFSCSKRKPQHTHPTNRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQS LQK+AK+SID GSV+ +K+N+KQEDT VA QSPPRS+QEKAVKE KKPG+ H
Sbjct: 61  FYDEWQSPLQKSAKKSIDGGSVMTAKQNMKQEDTNVAKQSPPRSRQEKAVKE-KKPGSCH 120

Query: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKNSS RSNGL +KMKELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSMRSNGLAQKMKELEMLDRGDMEQELDIEEAIHYYSRLSSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 210
           MD+HSE SVPEPSARSMNSSKRRMGSMRL
Sbjct: 181 MDIHSEFSVPEPSARSMNSSKRRMGSMRL 208

[Close]

BLAST of IVF0009682 vs. NCBI nr
Match: XP_016902859.1 (PREDICTED: uncharacterized protein LOC107991904 [Cucumis melo] >KAA0059298.1 putative ATP-dependent RNA helicase DDX11 [Cucumis melo var. makuwa] >TYK04030.1 putative ATP-dependent RNA helicase DDX11 [Cucumis melo var. makuwa])

HSP 1 Score: 404 bits (1038), Expect = 7.69e-142
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60
           MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 209
           MDMHSEISVPEPSARSMNSSKRRMGSMRL
Sbjct: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 209

[Close]

BLAST of IVF0009682 vs. NCBI nr
Match: XP_031744975.1 (uncharacterized protein LOC116405196 [Cucumis sativus] >KGN45372.1 hypothetical protein Csa_016780 [Cucumis sativus])

HSP 1 Score: 389 bits (999), Expect = 6.79e-136
Identity = 200/209 (95.69%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60
           MLLK+TIHKTNNLFHKTLE+FK+LFFKGFQKLQKPTSLIT SCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGS+IASKENVKQEDT VAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKN+STRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 209
           MDMHSEISVPEPSARS+NSSKRR+GSMRL
Sbjct: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 209

[Close]

BLAST of IVF0009682 vs. NCBI nr
Match: XP_038900276.1 (uncharacterized protein LOC120087356 [Benincasa hispida])

HSP 1 Score: 375 bits (962), Expect = 3.07e-130
Identity = 193/210 (91.90%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQ-HTHPTDRLYI 60
           MLLKETIHKTNNLFHKTLE+FKD FFKGFQKLQKPTSLITFSCSKGKPQ HTHPTDRLYI
Sbjct: 1   MLLKETIHKTNNLFHKTLENFKDFFFKGFQKLQKPTSLITFSCSKGKPQQHTHPTDRLYI 60

Query: 61  DFYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGAS 120
           DFYDEWQSTLQKAAKRS+D G+V+ SKENVKQEDT VA QSPPRS+QEK VKEKKKPGAS
Sbjct: 61  DFYDEWQSTLQKAAKRSVDGGNVMTSKENVKQEDTNVAKQSPPRSRQEKVVKEKKKPGAS 120

Query: 121 HLRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKF 180
           HLRKGDVKNSSTRSNGLV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVDKF
Sbjct: 121 HLRKGDVKNSSTRSNGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKF 180

Query: 181 FMDMHSEISVPEPSARSMNSSKRRMGSMRL 209
           FMDMHSEISVPEPS RS+NSSKRR+GSMRL
Sbjct: 181 FMDMHSEISVPEPSTRSVNSSKRRLGSMRL 210

[Close]

BLAST of IVF0009682 vs. NCBI nr
Match: XP_023548201.1 (uncharacterized protein LOC111806912 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 346 bits (887), Expect = 8.26e-119
Identity = 179/209 (85.65%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60
           MLLKETI KT+NLFHKTL +FK LF KGFQKLQKPT LITFSCSK KPQHTHPTDRLYID
Sbjct: 1   MLLKETILKTSNLFHKTLGNFKCLFSKGFQKLQKPTCLITFSCSKRKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQS LQK+AK++ID GSV+ +K+N+KQEDT VA QSPPRS+QEKAVKEKKKPG+ H
Sbjct: 61  FYDEWQSPLQKSAKKNIDGGSVMTAKQNMKQEDTNVAKQSPPRSRQEKAVKEKKKPGSCH 120

Query: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKNSS RSNGL +KMKELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSMRSNGLAQKMKELEMLDRCDMEQELDIEEAIHYYSRLSSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 209
           MD+HSE SVPEPSARSMNSSKRRMGSMRL
Sbjct: 181 MDIHSEFSVPEPSARSMNSSKRRMGSMRL 209

[Close]

BLAST of IVF0009682 vs. NCBI nr
Match: XP_022954247.1 (uncharacterized protein LOC111456559 [Cucurbita moschata])

HSP 1 Score: 343 bits (880), Expect = 9.97e-118
Identity = 181/210 (86.19%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60
           MLLKETI KT+NLFHKTL +FK LF KGFQKLQKPT LITFSCSK KPQHTHPTDRLYID
Sbjct: 1   MLLKETILKTSNLFHKTLGNFKCLFSKGFQKLQKPTCLITFSCSKRKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSVI-ASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGAS 120
           FYDEWQS LQK+AKRSID GSV+  +K+N+KQEDT VA QSPPRS+QEKAVKEKKKPG  
Sbjct: 61  FYDEWQSPLQKSAKRSIDGGSVMMTAKQNMKQEDTNVAKQSPPRSRQEKAVKEKKKPGRC 120

Query: 121 HLRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKF 180
           HLRKGDVKNSS RSNGL +KMKELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKF
Sbjct: 121 HLRKGDVKNSSMRSNGLAQKMKELEMLDRGDMEQELDIEEAIHYYSRLSSPVYLEIVDKF 180

Query: 181 FMDMHSEISVPEPSARSMNSSKRRMGSMRL 209
           FMD+HSE SVPEPSARSMNSSKRRMGSMRL
Sbjct: 181 FMDIHSEFSVPEPSARSMNSSKRRMGSMRL 210

[Close]

BLAST of IVF0009682 vs. TAIR 10
Match: AT3G16070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 59/177 (33.33%), Postives = 93/177 (52.54%), Query Frame = 0


Query: 9   KTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYIDFYDEWQST 68
           KTN+ FH+TL S K +  +  +KL +P +   FSC+  +  ++   D +Y  F + W+S 
Sbjct: 4   KTNSFFHRTLHSLKSIIIRAGKKLPRPKT--HFSCTFCR-SNSLDGDNIYASFLNIWESD 63

Query: 69  LQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASHLRKGDVKN 128
           L+ + +  +            K E  +         +QE+  + KK    S         
Sbjct: 64  LENSIEGPL------------KLEHKV--------QEQEQYHQVKKTEACS-------SY 123

Query: 129 SSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHS 186
           SS   + + +K+ E+ M +  D+EQ LD+EEA+HYYSR+ SPVYL IVDKFF D++S
Sbjct: 124 SSRDCDTMEKKINEMYMTETVDIEQALDVEEALHYYSRISSPVYLNIVDKFFTDLYS 150

[Close]

BLAST of IVF0009682 vs. TAIR 10
Match: AT1G15260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 7.5e-14
Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 93  DTIVAIQSPPRSKQEKAVKEKKKPGASHLRKGDVKNSSTRSNGLVEKMKELEMLDRSDME 152
           DT VA  +  +S   +  K+ KK           +++  R + L +KMK+L M+D  D++
Sbjct: 69  DTAVADTTHQKSLNNQHKKKPKKVAE------PFEDAKKRGDALAQKMKDLNMVDLRDVD 128

Query: 153 QELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSMNSSKRRMGSMRL 210
             LD+ EA+  YS +RSPVYL+IVD FF DM+ E S P  SA+ +N S+R+ GS RL
Sbjct: 129 HALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSAK-INGSRRKAGSFRL 178

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BLAST of IVF0009682 vs. TAIR 10
Match: AT3G24535.1 (unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 9.2e-04
Identity = 25/79 (31.65%), Postives = 44/79 (55.70%), Query Frame = 0


Query: 129 SSTRSNGLVEKMKELEMLDRSDMEQE----LDIEEAIHYYSRLRSPVYLEIVDKFFMDMH 188
           S  + N +  K+KE+E +   D+  +     D+ E +H YSRLR   YL++V+ FFM+++
Sbjct: 95  SQPKVNLVRTKLKEMEKMMNDDIISDEYYVSDVIEFLHCYSRLRYTAYLDVVENFFMEVY 154

Query: 189 SEISVPEPSARSMNSSKRR 204
           S+   P     +  + +RR
Sbjct: 155 SDFFSPHHLVGTRTAVQRR 173

The following BLAST results are available for this feature:

BLAST of IVF0009682 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009682 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BXY4	1.1e-108	100.00	Putative ATP-dependent RNA helicase DDX11 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S4E3Q5	1.1e-108	100.00	uncharacterized protein LOC107991904 OS=Cucumis melo OX=3656 GN=LOC107991904 PE=...	[more]
A0A0A0KAF5	3.5e-104	95.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446870 PE=4 SV=1	[more]
A0A6J1GQI6	2.2e-90	86.19	uncharacterized protein LOC111456559 OS=Cucurbita moschata OX=3662 GN=LOC1114565...	[more]
A0A6J1JPP9	8.5e-90	85.65	uncharacterized protein LOC111488716 OS=Cucurbita maxima OX=3661 GN=LOC111488716...	[more]

BLAST of IVF0009682 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902859.1	7.69e-142	100.00	PREDICTED: uncharacterized protein LOC107991904 [Cucumis melo] >KAA0059298.1 put...	[more]
XP_031744975.1	6.79e-136	95.69	uncharacterized protein LOC116405196 [Cucumis sativus] >KGN45372.1 hypothetical ...	[more]
XP_038900276.1	3.07e-130	91.90	uncharacterized protein LOC120087356 [Benincasa hispida]	[more]
XP_023548201.1	8.26e-119	85.65	uncharacterized protein LOC111806912 [Cucurbita pepo subsp. pepo]	[more]
XP_022954247.1	9.97e-118	86.19	uncharacterized protein LOC111456559 [Cucurbita moschata]	[more]

BLAST of IVF0009682 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16070.1	1.4e-15	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15260.1	7.5e-14	41.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G24535.1	9.2e-04	31.65	unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..134
None	No IPR available	PANTHER	PTHR35461:SF1	LOW PROTEIN: ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN	coord: 1..209
None	No IPR available	PANTHER	PTHR35461	BNAANNG14610D PROTEIN	coord: 1..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009682.1	IVF0009682.1	mRNA