IVF0009629 (gene) Melon (IVF77) v1

Overview
NameIVF0009629
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr09: 23395385 .. 23397069 (+)
RNA-Seq ExpressionIVF0009629
SyntenyIVF0009629
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTCAAAGCAACAGCATCATCAGCCATCAATGGCGGCAATTCCATCATTAAAATAGTAATTGAAGAAACCCCATTCATATCACATGGACCCTCCTCCTGTTCCTCTGGCGTTTTTGACCATTTTCTGATGTGGGTTTTGATCTCTTTCTCCCTCCATTTTTCTTTTTCCTCTCTGTATGTGATGTTAACTGCTCTCTTTTCACTAGTAAAACAAAAATCTTTTGCAGCTGAGTTTTCATTTTCGTTCCTCTTTTGTCAGTTTCATCAATCAATGCAATGCAATCGACTGGGAATGCAATTTTTTTCTCTTTGTTTCGAGTTGTGTTGATGGAGATTGCTATTTTTGGATCTTGAGAAAGCTTCTGGGAAGTTTGAAGTAAGAAGTAATTCTATAGCTAGGTTTATTCTGTTCATATCCTTGCTTGTTTGACTTCTGAGAAAATGAAGAATATAATCTTGATTTCAAGCCATTGAACTTTTGAGGTTCTTCTTCTCGTTCTGACTACAAAATGATATTGATTCACTTCAGTTTTCTTAATGCTTTGCTTCATTTGTGCATCTTGAGCATGCTTTGCTGAACTCTTGTTTGTTGTTACTCCTTCTATTTAAACTTCTTTTTCTTATTTTTTCTGTTTTTAAAACTTGTTTGGCCACTGATGAAATGGGAAGTAAAATTATGACTGTTTGTTTTCTCACCATTTCTTTGCTTCATTCTTGCATCTTCAGCAAGTTTTGTTGAAGTCTGGGAGGATGTTTGTGAGAAGTAAATCCTCTGCTACTCATTTGGTTTCAGCTCCATTTTTCTCACAGCTGTTTTTGAACTTGTTTGGCTACTGAGAAAATGAGAAGTAAAATCTTAATTTGCACTCATTTAGGCCCATTTGATTACCACTTAGTTTGTGAAAGTAAGACTACAAACATCAGTTCTACTTATTAGTTTCTTTTTTTTTTCCTGGTGTTGTCTACTTTTCAAGAGTTTTCAAAATATAAGCTCAGTTATGAAAACTAAAAATGGTAGTTTTTTAGTTTTGAGAATCGTATTAAGAATTAAAATATTTACTCAAAAGAAAGATGTAAACTATGCTTAAAGTTATGGAAAAAATAAGAACAATTATAAACAATATAAAACCAAAAAGGGCTTAACATTTTTGGGAATCAAGTAGACTTGTAGCTGAGTAATAAATCCACAACTTTGCTATTTCAACATGTTCTTTATTTTCCCTATCCTTGGTGTTTCTTTGTTTTGTTGTGTACTTTCTTAGTTTAATTGTTTCTATACAAAAGCTAAAAACATACAAAATAATTTATGGTAAAGCCAACATAAATTGGAAAAATGGAAAATTAAAATGAAATTGTCATTGAATGAGACATTTTTTGTTCTTCTGACTGATTGAACCAATGATATGGGTTCACTTGGGTTTTATTTTGCTTTGAGTCTGTAGATTTAGATGACCACTATTTTTGCATGATTGTCTCAGGCCTGGAAGACTAGCAGTTAATGCTAATAGTAAATTCATTGCTAATCTTTCTTTCTTCTCTCCTCCCATCAGTTTCTGGTCCTTTTGGCTATTGATAAAATGGGAAGTAAACCTCAATTCATTTCAGTATTTTATGTCACCACGTATTGGTTTTGATTCGTTCTCTTCTTGCTATTTTCTCTGATCATGAAGATGCAACTAG

mRNA sequence

ATGGGCCTCAAAGCAACAGCATCATCAGCCATCAATGGCGGCAATTCCATCATTAAAATAGTAATTGAAGAAACCCCATTCATATCACATGGACCCTCCTCCTGTTCCTCTGGCGTTTTTGACCATTTTCTGATTTTCATCAATCAATGCAATGCAATCGACTGGGAATGCAATTTTTTTCTCTTTGTTTCGAGTTGTGTTGATGGAGATTGCTATTTTTGGATCTTGAGAAAGCTTCTGGGAAGTTTGAAATGCAACTAG

Coding sequence (CDS)

ATGGGCCTCAAAGCAACAGCATCATCAGCCATCAATGGCGGCAATTCCATCATTAAAATAGTAATTGAAGAAACCCCATTCATATCACATGGACCCTCCTCCTGTTCCTCTGGCGTTTTTGACCATTTTCTGATTTTCATCAATCAATGCAATGCAATCGACTGGGAATGCAATTTTTTTCTCTTTGTTTCGAGTTGTGTTGATGGAGATTGCTATTTTTGGATCTTGAGAAAGCTTCTGGGAAGTTTGAAATGCAACTAG

Protein sequence

MGLKATASSAINGGNSIIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECNFFLFVSSCVDGDCYFWILRKLLGSLKCN
Homology
[Close]
BLAST of IVF0009629 vs. ExPASy TrEMBL
Match: A0A0A0KLZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139670 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.6e-37
Identity = 79/86 (91.86%), Postives = 79/86 (91.86%), Query Frame = 0 

Query: 1  MGLKATASSAINGGNSIIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECNFF 60
          MGLK TA SAINGGNS IKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWEC   
Sbjct: 1  MGLKETA-SAINGGNSTIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECKKN 60

Query: 61 LFVSSCVDGDCYFWILRKLLGSLKCN 87
           FVSSCVDGDCYFWILRKLLGSLKCN
Sbjct: 61 FFVSSCVDGDCYFWILRKLLGSLKCN 85

[Close]
BLAST of IVF0009629 vs. NCBI nr
Match: KGN49889.1 (hypothetical protein Csa_000104 [Cucumis sativus])

HSP 1 Score: 162 bits (410), Expect = 4.55e-50
Identity = 79/86 (91.86%), Postives = 79/86 (91.86%), Query Frame = 0 

Query: 1  MGLKATASSAINGGNSIIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECNFF 60
          MGLK TAS AINGGNS IKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWEC   
Sbjct: 1  MGLKETAS-AINGGNSTIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECKKN 60

Query: 61 LFVSSCVDGDCYFWILRKLLGSLKCN 86
           FVSSCVDGDCYFWILRKLLGSLKCN
Sbjct: 61 FFVSSCVDGDCYFWILRKLLGSLKCN 85

The following BLAST results are available for this feature:
BLAST of IVF0009629 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0009629 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLZ87.6e-3791.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139670 PE=4 SV=1[more]
BLAST of IVF0009629 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49889.14.55e-5091.86hypothetical protein Csa_000104 [Cucumis sativus][more]
BLAST of IVF0009629 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0009629.1IVF0009629.1mRNA