IVF0009617 (gene) Melon (IVF77) v1

Overview
NameIVF0009617
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionHistone H2B
Locationchr12: 8440414 .. 8450089 (+)
RNA-Seq ExpressionIVF0009617
SyntenyIVF0009617
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTTGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCCGTTACTAAGTTCACTAGCTCTTAGATTGATAGATATTAGGGGTTTCTCGTGTAAAAAAGCATGACGACTGTTCTGGATTGTTGATTTCTTTTGCTTTTGTTGCATATTTTGGAGTTTAATGAATGGAAATCAGTTTTCATAACGTGAATTCTTTTCAATGGCCGCTTTGTTCGGGTTGTTTGCTGGACGGTCTCTGAAAATTTACCGTAATTTCACTTTAACAAGTTTGTATGCCTGAGATTCAATATGATTGCAACAAGTATTTAGGGTTTGTTGCTTTTCAATGGTCCAGGAAGAAGACATTGATTCAATGCCGGTGAATGTGCTTCAAACTTGCCCTCTTGGTTCATGTTCTAGCTTGAATCATTTGTTGATTTATGTTTTGAAGATGCTTGTGCAAGTGACTGTACAAACTGTAGATTCCCGTGTCTTTGATAGAAGTTTTCATTGTGGGGTTTTTACAATTTCTTAGACAATGATTTCTGTGTCCCTTTGTTTGGCATCTTCAATTTGGGATCAGGGTGTTGGCATAAATCTTGAATCCATCCTCATTTTATTGATTGGTGGTGAAAGCTGTTGTCATCCATGGGTGATGTTCTGAGTTTATCCAACAAGTTAGAGAATTTTCAACCAGTAAACAGTCCCCTCAATCCACAAAGTTTAGCTCGGTCATTGTGGCCATTTTTGAGCATCTTTTGTTTGAGAATGAAAAATTGTTGCTTTCCTTCTCACCTTTGGATGATTTTGAGTTCAGGCATGGCTTCTTGTGTAGATTTTTTGTTTTCTATTATCTTTTGTGATCTTGGGCTCATTAGTCGCCTAGAGCATGTGCCACAAATGTTTCTACTCTGGTGTCTCAAGGCCTCCTCTTTGTTCTGATGAGAGGTTTGGAAAGAGCCAAAGCCACCACACCCCTAAAATAGTTGACTCAGAATTAATCATAAAATAGCTTCACCTTTCCATGTATTATTTAACTGCAATATGCGATAATTCTTTCATTATCGCTGCTATTGTCTAGACTCCCCGACGACTTTGATATGCCTGAGTTCTCATCAGTTACGAATCAGTGGGATCTATTGTATGATTACAATACACTAATGGAGAATGTATCAGATCTTTCCTACAGATTTTGCTCCTCACCAAGGTAAGGGAGGGCCAATGTGGAAGAACCTGTTTCAATTAAACTTGAAATTTGCACCAGCGGTTTAGTTATTGATTGAATCATTGTCCTCGTTTTTGTTTTTCTGTTCTTTCTGTTTCTGATGGATGCTTAGTGAAAGAAATGTCAGATATAAAGAACCAAAGAACTCAATGGTACCTGCTGAGTGCTGTTAAATATTTACTATGATTTATAAAAGATTATGTTTCAAGAAACAAGATCATATGACAGGAACAGTACTGATGATATGGCAGTACTGTACCTAGAGTATACTAGTAAACTTGGTCTAGAAAATCTCATTTGTTTTTTGTTGAACATCTCAATATCTTGCTTCTGAAAAGGAACATTTTCACAGGTTACAGGGAGGCGGGACTGGGCAAATTCATTACCTTTCAAGTTGGATTCTAATGGTCCCTGAGGATTATCTGGAGCAAATAAGGGTAACCCAAGGATTAGTGCCAAGTTTATTGCTCCTTGTTACTATATCAACAAGTAAGGATTTCACTCTTTTTCTCCTGTGTTCACATTTGAATAATGCATAGCTTTAGATTGTTGAAACCATCCCTTACATCTCTGATATTATATATCAATAGATATGCTTATGCAATTATGATGATTAAGTACCTCGTGCATTAAGCGGAACATGTGTGGTAGCTTAGTATAATGGCTGACAGAGTGATAGTTTATTGAGAGTGAGCTATCTCTCTCAATTCTATCCCAAATTTGGCCTGCCTTCTCTTGCATCTCTGTCTTCTTTTTAAACATCTTACTACTAACAAGTTAACTAATTCACTTGCTCTTCCCAACCATATGCATAAAAAAGTTATTCTCAATGATTATTCTACCCTTTGATCCTAACGTATGTCCAAGTGGCATGGGCATAAGCTTCATTCGGTATCAAGTGTCAGTTTGTGTTATACATGTAAGGAAAAGAAAAAAAAATCATTTCACTCTTTCTTTTTGGAAACATTCCTGGATGCAAATTATAACAATGTTAGTCTGAGGAGGCAAGTATTATTCTTAAGAAATTTTTAATATTTGAAGCAAAGTATTTCTTTTGATAATGTAGATGTGGTAGTTAATAACAAGTGACCATAGGGACCCAAGCACATGATACTTGAAACTTGAGTGTATTAGACCTCTTTAGCGTTTCTGAATTTTTATAATATTTCCACTATGAGAAAGATAGTATGTGTCATTTGAAATTAAAGCTCTAGGAAACGGAAGGCAAAAAGAAATCAGAAAACTTTGGTAGGAATTGTAACGTTGATGTTAGGAAAATTGCCAGTGCATTTGCTGTGCATCTTTGATAAAAGGAATGTGTCATCAGTTGTGGAGGTGAGAGAATATTGAGAGGGCAGTAAATAAACCGCTCCAAGTTAGGTGAAATGAGCATGGGGTAGGAAATGAATAACGGAGTAGTCTCGAATAAGTGTTCCAAGCAGTACACCAGATTATTAATTGCCAAAGTAGGTTTGGACTGGGTGAGCTTTTAGGAATTTATATCCTCTTTCCATTTTACGCATTCAAGAAAGAAGGCAAGTCAAGGCTGACAGTTAGAGAATTGAATAGTAAGAACTAACTGAAGCTTCTTTAGTTTTGTAAAAATACCAGACACCTCAAAAGTTAAAAAATTCTTGGAGCTTTCCTCAAAAAAAAAAAAAAATAAAAATAAATAAAAAAAAAAAATAAAAAAAAAAAAAAAAATAAAAGAAAGAAAGAAAGAAAAAAGAAAAAGTAAATAAAAGAAAAATTCGTAACACTCTACTGAATTTATCGTCAATTGTTTCTACATTCTATTTTCTTTTGTTTAATTGCTAAACATTACGAATCTCTTATAAACAAATTCTTATAGGTTTGAACTTTTTATGTAAACTTTTCTTGAGAGTGGAGATCGACACAAAGCTTCTGATGAAACTCTATCCTTCTTGATATTGAATTTCCTCTTTATTGATTCAAGATATTACAATGAGGAACTGAGTAAACTCAATTCCTTTTTTCTCTCTACTATCTTCCTCTCTCTCAAGGAATTACAATAAAACTTCCTCACTAAAATTCTCTGCTTTCTCAATTCAATTCCCTTAGTATTTATGCTAATCTTGCTAGCCTCGAACTAACTCACATGTGAAAAGTATGTGATGTGCTACTACAACTAATATAACTAATTTCAACTGCTGTAACTAATTCTTCCGTCTGTTGTAAACAAATCTAATTGGGGGTCTAACATTACTCCCCCCTTTTAGATTCACCTTGTCCTCAAGGTGAAGAGTGGGGTACAAGCAATGCATTTCCTCATATGACTCCCAAGTTGCCTCATGTAATGGTGACCCTTCTCATTTGGTTAGGACTTCCCACTGTTCAGCCTTGTTTTGTCGATACTCTAAAACTTCTTCAGGAACCGATTTCCATTCAAATTTTCAGTAATGTGCTGGATTGTAGGTTGTGCACTTTCATGTGACCTGATTAATTTCTTGAGCTGCGACACATGGAATGCCGGATGAATGTTGGTAGTATGTGGTAACTCGAGTTTATAGGCCACGGGTCCAACTTTCTCCAAGATTTTGTAAGGGCCAAAAGATTTTGGGGAGAATTTCTCATTTCGCTTTCTCCCAAAGGTGAGTTGTCTATAGGGGCGTATCTTTAGAAAGACAGTCTCCAACACAATATTCTACATGTCTTCTTTCTCGAACAGCATAGTCTTTCATCTGTTCTTGTGCTAGGTGTAAATGGTCACGCAGAGCACTTAAAATCTCGTCCCTTTCTTGTAACATCTCTTCAACTGTTGAATTTTTTGATTGCATACTGCCATAGGATAGTAAGGCGGGTGGTTTTCTACCGTAAACAACCTGAAAAAGGGACATCCCAATGGCTCGTTGAAATGTAGTATTATACCAGTACTCGGTCCAGGGAAGCCATTTTACCCATTCTTTTGGTTTTTCATTGCAAAAACACTTGAGATAGGTTTCAACCCCTCTATTGACTACCTCCGTTTGCCCATCGGTCTGAGGGTGGTAAGCCGATACTCTAAATAGCTCCTGCCAAAAATGACTCGGAAAGATTTTGTCTCTATCTGATACAATGGACAATGGAAACCCGTGTAATCTCACAACTTCCTTTATGAACAATTTGGCTACCACTTTTGCGGTAAAGGGATGTTTAAGGGGCAGGAAATGACCGTACTTACTCAATCTATCCACCACTATCAAAATCACTTTAAACCCACGGAATCTCCAAGGGTACTAATAGTCCAGCAGGGGATAAGGCTAGTGATTTGTTTCTTTGGCATATCAAACATTCTTTGCAATGTCTTTTAATATCTGCTTTCATTCATTTCCAATATAAGTCACTAGATATCGTTTTGTAGGTTTGTAAAAACCCTGAATGCCCTCCAACAACACAATTATGATAGGTGTCTAAAATTGCGGAAATTAACGAGGAGGTTTTGGTGATCACCAACCTATCCTTATACTTCAGAACATCATTCTGGAGTGAATATTTGCTGTCCTGCTGATCTTTCAACTCTCTCAATTCTGTTATTAATTTCTGGAGTTTGAGATCTTGATGCACTTCTTTCTTGATTAATTCGAAGTCTACGGTCATCGGCACAAACAAGCCTCTTAATTCTATCTCGGCTGGTATTCGAGAGAGGGCGTCTGCAGCGATTTTCATTGCCTAGCTTGACACGACTTCAAAGGAGTACCCCAAGAGTTTTGCTATCCAGTTTTGATATTGAGGTTGGATAACCCTCTGCTCCAACAAAAACTTCAACGACTTCTGATCAGTTTTCACCTTGAATTTTCCTCCCAATAAGTAGGGTCTCCAGTGTTGGACGGCTAATACTACAACCATTAATGCCCTTTTGTACACTGGTCGGGCTCTATCCCTTAGGGCTAATGTGCGACTGTAGTATGCGATTGGTCTCTTCGCCTGAATTAGTATTGCCCCAACACTGTAGCCTGAAGCATTGGTTTCTATTTCAAAGGGTTGACTGAAGTCTGGTAGTGCCAACACCGGGAGAGATGACATTGCCTTTTTAAGCCGTTCGAATGCATCCTCGGCTTCAGCAGACCATTTATATCCTCCTTTTTTAACAACTGAGTTAATGGGGCTGCAATGGCTCCATAGTTCTGTACAAAACGTCGATAATACCCAGTAAGTCCCAGAAAACCTCTAACTTCTTTGATGTTTGTAGGTTTTGGCCACTTAGTAATTGACTTGATCTTCTCCGGGTCTACTTCAACTCCTTCTTCGGATATACTATGGCCTAAGTATTCCACTGTTTGTTGAGCGAAACTGCATTTCTTCTTGTTTGCGTATAGCTCACGTTCTCTTAGTACGGACAACACCTTTCTCATATGTTCCTCGTGATCGATTATATTTTTGGTGTAGATGAGTATGTCGTCAAAGAATATTAATACAAATTTTCTCAGGAAGGGCTTAAATATTGTATTCATCAACGCTTGAAAGGTGGCTGGTGCGTTAGTTAGCCCAAAGGGCATGACTAAGAACTCATAATGGCCCTCGTGAGTTCTAAAAGCCCTTTTTTCAATGCCCTCATCCACCATTCTAATTTGGTGATACCTCGACTTTAAGTCGATTTTAGAGAACACAGCCGCTCCGCTTAATTCATCAAATAATTCCTCAACCACTGGAATTGGAAATTTATCTGGAATTGTTGCGTTATTCACAGCCCTGTAATTTACACAAAACTCCAGCTTCCATCTTTTTTCTTCACCAGTAAGACAGGACTGGAGAAGGGTTGTTGCTGGGCCTTATAACTCCTGATTCCAGCATTTCCTTGACTAGTTTTTTCATTTCTTCCTTCTGTTGAAAGCCATAGCGATAAGGTCTTACGTTTATAGGATCGGTTCCTTGCTTCAAGTGTATTTGATGTTCTATTTCCCTTCTAGGAGGGAGTTTTTCTGGCCATTCGAACACATCCTCAAATTGTTTCAACATGGTGTTCAAGGAGCTGTTGGTCTCAATCTCCATGTGTGTCGTATGACAATCGTTATTGACTGGTGTCACAAGTTCTATTGCTCGACATTCAACGAGGAAACCTTCGTCATCCACTCCCCAAGCTTTGATCATATTCTCGAGGTTGACCCTTGCTTTAGTCAAGCTTGGATCTTCTTGAATTTTGATAGGTTTTCCTTTGACTGAAAAGGTTGGTAATAGGTTCTTCCAGCCTACTGTAGTTACCCCTAAGGAGTGGAGTCACTGCATACCTAGTATGATATCAACCCCTTCGAGCTCCAAGGGTAAATTTTTTCTTTAATTGTCTAGTTCTTCACAAATTCCCTTAATTTGGACAGCAGCTCTTGAGCCTAGAATAACACCGTAGTGTGCTGTCTCTTTGATTGGGATAAACAATTTCTTGACTAATTTTTCAGACACAAAGTTATGGGTCGCGCCGCAATCGATTAGTATTATCACATCTTCGTCCCGTAGTTTACCTCTCACCTTCATAGTGCCCGGGTCATTCAAGCCTATCATTGAATTGATTGAGAGTTCAACAAAGGTGGTGGTATCTCCTTTGACTTCTATCGTATTCAACTCTCCCTTTTTTACTTCATCTCCATCGACAATCTCAGGTTCTTCTTGATCATTTGTTACTACAAACATCCTTAACTCACGATGCTCCTTCATTTTACACTTATGATCGGCTGAATACTTCTCATTGCATCTGAAACATAAACCTTTTTCCTTCCGGATTTGAAATTCTGCATTCGGTAGCCGCTTATATGTTCCTTCTCTTCGATTTTCACCTTGGGCAGGGCTCCTCAAGGTGATTGTTCTAATAGGAAATGTGGTGTTTCCTTTGGTTTCTCCGGTGGTATTGATGGTGGTGTTCTTTCTCCAAGTGTTTGAACAAAATTTTTCCTGTCGGAATGCCCATTTAAGTTTGCTTCCCTTCTGAAACTCTCTCTGTTTTCCACTAGCTGGGCTACCTCCATCATTTTGGCTAAACTCTTCGGCCTACAGAAGGCGACTTCTGCTCTAATCCAAGGTAGCAATCCATTCATAAAAGTATCCTCTACTACCCGTTCTGGTAAATTGGATAATGGCGCGACGAGCTTATCAAACAAATCTCTATATTATTCTACAAAGGATTCCTGTTTGATGCGTAAGAATTGAGGGCCGATGGTTCCGTCCTTGATCTAAATCGCACTAACAATCGTTCTTTAAGATTCGTCCAACTTTTGAATTTCTCTTTCTTCTTGTGATCTAAACCAATTTAATGCTGGGCCGTTGAAACTAACAGTAGATACGAGCATTTTTTCAGACTCGGTTACCTTATGGATTTGAAAGTACCTTTCGGCGCGGAATAGCCATGAATCTGGGTCTTCGCCAGTGAACACATGCATTTCCACCTTTTTGAACTTGTTTCGGTCACTGTAGTTTTCATCGCTTTTGCTCTTTCTTTCGTTTAGGTCGTCCTCGAATTTTCGCTTCGATTCCTCCGTTTTACTCGATGAGGCTTCATTCTCCTTTCGTTTATTATTTTCGGCATTTTGCGTAGGTGTTCCTATCGTTTTTTCCTTCATTGCGGACCGTTCCTGCACATTTGTTTCCATCATCGTTAACAACATTTGCTGTTGCTTTTCCAATTGTAGTCGCATTAGCTCGAGATTCTTCGATATTTCGCTCAGGCTAATTTCGATCGTAGGCATTTTGCTTATCTCTCTTTTCATCCCAACGATTTCTTGATCGATCATCTCCAGACGTTCTTCAATGCGTGTCTGTACCATTTTGATGCTTCAGATTGTCGGCTCTGATACCAATTTGATGAAACTCTATCCTTCTTGATATTGAATTTCCTTCTTTATTGATTCAAGATATTACAACGAGGAACTGAGTAAACTCAATTCCTTTTTTCTCTCTACTGTCTTCCTCTCTTCAAGGAATTACAGTAAAACTTCCTCACTAAATTTCTCTGCTTTCTCAATTCAATTCCCTTAGTATTTAAACTAATCTTGCTGGCCTCTAACTAACTCACATGTGAAAAGTATGTGATGTGCTACTACAACTAATATAACTAATTTCAACTGCTGTAACTAATTCTTCCTTCCGTTGTAAACAAATCTAATTGGGGGTCTAACAGCTTCCTTTACTTGGCGATCAAAAATGGGTAGTATGGATTTGCTCCTTCAATGTGTTAATGGGTCCTGGAAAAACTTGTATGTAGTGCTCGAAACTTCTTCCAGTTTTCAATGCCCGGACTTGCTTGGTGGCAAGTAAGCAGTCCGTGTTAATTAAATCTCTTTCTCATTTTTATGATATATTATAGTCTCTACAGTTATTGAGCATTCAATATGCAGTAATATGTTCCGATATTACAGTGTTTGACTTCCTAAGTTTGCTTTCTCTATTTGGTGGTTCCTTGATGGCACGAGCATTGGACTTCAAATAAGGTATATGATAGAGACATGATTGTTCTTCAGGGTCAGGAGAAGATAAATATCAATGGAAGGTTTGGACAGATATAAATAAAAATAAACTAAAATAACGTTTACACCAACACAAGCGGAAACTTTTGGTTGTAGCATTTTGAAATTGGCTGAGGCGCCACGGAAAAGGCCAACCTGAATGGTTCAGGACTAGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCTAAACGTCAGGTACTGAAAATTACCAGCATCTGGATTGTTTTGAAATTGACTAGAATGTCCGTGTACAATTCGTCCAATTTCTGTAACTACTATAAGTTTGGAAGTCTAATTTTAATAATCGTAAGTTTAAGGTCTTAATTTTTATTATTAAAAATAAGTGTGGTTGATGAGATTATTATCATCTCCGCTACAGATGGACAGATTTGAGCAACACACACTTAATTGTCCATCTTGTAAAGGAGCTTAGGAAACATTTCAAACAGTGCAAAGGCTCCTAATTGGGGCAACTGTAGTTTTCGCGGCCACCACAGGTATCCCTTGTGCTGTACAGATACACATATTCTTCTTGCCAGTCTTGCACTCGCAAGCGTCGGCTTGGCTTAGGCTCGGTTTGAACTTCAAAAGAATTTTGTGTTCATTGACTATGTTCATGCAGAGATTGATTAGAAGATACCATTAGAGATTGAGAGAGAAATATTGTTGTTTAGAGGAGGATTTTAATCAAGTAATGTATAGTTTTACAAAGATATCGTAGTTGAACTGTGCGAAATGAAACTAGAGACGAATATGTCTTCGTTTTGTTTGGTTGTATTCTTGTTACAGCCATTAATTTTGATATTGTTCCAATTCAGTTTTATTTTAGGACTAATGACGTTAGTTGTTGATGTAACAAAACTTTGATTTTGAGTACATGACTCCAC

mRNA sequence

ATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTTGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTTACAGGGAGGCGGGACTGGGCAAATTCATTACCTTTCAAGTTGGATTCTAATGGTCCCTGAGGATTATCTGGAGCAAATAAGGGTAACCCAAGGATTAGTGCCAAGTTTATTGCTCCTTGTTACTATATCAACAAGGTCAGGAGAAGATAAATATCAATGGAAGGTTTGGACAGATATAAATAAAAATAAACTAAAATAACGTTTACACCAACACAAGCGGAAACTTTTGGTTGTAGCATTTTGAAATTGGCTGAGGCGCCACGGAAAAGGCCAACCTGAATGGTTCAGGACTAGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCTAAACGTCAGATGGACAGATTTGAGCAACACACACTTAATTGTCCATCTTGTAAAGGAGCTTAGGAAACATTTCAAACAGTGCAAAGGCTCCTAATTGGGGCAACTGTAGTTTTCGCGGCCACCACAGGTATCCCTTGTGCTGTACAGATACACATATTCTTCTTGCCAGTCTTGCACTCGCAAGCGTCGGCTTGGCTTAGGCTCGGTTTGAACTTCAAAAGAATTTTGTGTTCATTGACTATGTTCATGCAGAGATTGATTAGAAGATACCATTAGAGATTGAGAGAGAAATATTGTTGTTTAGAGGAGGATTTTAATCAAGTAATGTATAGTTTTACAAAGATATCGTAGTTGAACTGTGCGAAATGAAACTAGAGACGAATATGTCTTCGTTTTGTTTGGTTGTATTCTTGTTACAGCCATTAATTTTGATATTGTTCCAATTCAGTTTTATTTTAGGACTAATGACGTTAGTTGTTGATGTAACAAAACTTTGATTTTGAGTACATGACTCCAC

Coding sequence (CDS)

ATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTTGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTTACAGGGAGGCGGGACTGGGCAAATTCATTACCTTTCAAGTTGGATTCTAA

Protein sequence

MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGYREAGLGKFITFQVGF
Homology
[Close]
BLAST of IVF0009617 vs. ExPASy Swiss-Prot
Match: Q9LQQ4 (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 4.2e-18
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 128

[Close]
BLAST of IVF0009617 vs. ExPASy Swiss-Prot
Match: Q9ZUS0 (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 4.2e-18
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 74  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 119

[Close]
BLAST of IVF0009617 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 90.1 bits (222), Expect = 9.4e-18
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 85  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 130

[Close]
BLAST of IVF0009617 vs. ExPASy Swiss-Prot
Match: Q1S9I9 (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 90.1 bits (222), Expect = 9.4e-18
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 83  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 128

[Close]
BLAST of IVF0009617 vs. ExPASy Swiss-Prot
Match: Q9SI96 (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 90.1 bits (222), Expect = 9.4e-18
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 86  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 131

[Close]
BLAST of IVF0009617 vs. ExPASy TrEMBL
Match: M5W0M7 (Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 76  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 121

[Close]
BLAST of IVF0009617 vs. ExPASy TrEMBL
Match: M5WDD7 (Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 128

[Close]
BLAST of IVF0009617 vs. ExPASy TrEMBL
Match: A0A6J5XGW8 (Histone H2B OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS36013 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 128

[Close]
BLAST of IVF0009617 vs. ExPASy TrEMBL
Match: A0A397Y067 (Histone H2B OS=Brassica campestris OX=3711 GN=BRAA09T40128Z PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 73  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 118

[Close]
BLAST of IVF0009617 vs. ExPASy TrEMBL
Match: A0A397ZIS9 (Histone H2B OS=Brassica campestris OX=3711 GN=BRAA04T16298Z PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 73  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 118

[Close]
BLAST of IVF0009617 vs. NCBI nr
Match: VVA96988.1 (unnamed protein product [Arabis nemorensis])

HSP 1 Score: 92.0 bits (227), Expect = 8.21e-23
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 46
          MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 1  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 46

[Close]
BLAST of IVF0009617 vs. NCBI nr
Match: XP_008464354.1 (PREDICTED: histone H2B.1, partial [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 1.04e-22
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 46
          MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 10 MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 55

[Close]
BLAST of IVF0009617 vs. NCBI nr
Match: GEW92838.1 (histone H2B [Tanacetum cinerariifolium])

HSP 1 Score: 92.0 bits (227), Expect = 1.66e-22
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 46
          MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 27 MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 72

[Close]
BLAST of IVF0009617 vs. NCBI nr
Match: 6M2M_B (A role for histone chaperone OsChz1 in histone recognition and deposition [Arabidopsis thaliana] >6M2M_D A role for histone chaperone OsChz1 in histone recognition and deposition [Arabidopsis thaliana] >6M2M_F A role for histone chaperone OsChz1 in histone recognition and deposition [Arabidopsis thaliana] >6M2M_H A role for histone chaperone OsChz1 in histone recognition and deposition [Arabidopsis thaliana] >6M2M_J A role for histone chaperone OsChz1 in histone recognition and deposition [Arabidopsis thaliana] >6M2M_L A role for histone chaperone OsChz1 in histone recognition and deposition [Arabidopsis thaliana] >7BP2_B Structural mechanism directing nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) [Arabidopsis thaliana] >7BP2_D Structural mechanism directing nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) [Arabidopsis thaliana] >7BP4_B Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) [Arabidopsis thaliana] >7BP4_H Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) [Arabidopsis thaliana] >7BP5_B Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) [Arabidopsis thaliana] >7BP6_D Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) [Arabidopsis thaliana] >7C7X_B Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) [Arabidopsis thaliana] >7C7X_D Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) [Arabidopsis thaliana])

HSP 1 Score: 92.0 bits (227), Expect = 1.97e-22
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 46
          MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 33 MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 78

[Close]
BLAST of IVF0009617 vs. NCBI nr
Match: MCI71321.1 (histone H2B [Trifolium medium])

HSP 1 Score: 90.9 bits (224), Expect = 2.12e-22
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 46
          MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 1  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 46

[Close]
BLAST of IVF0009617 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 3.0e-19
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 128

[Close]
BLAST of IVF0009617 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 3.0e-19
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 74  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 119

[Close]
BLAST of IVF0009617 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 6.7e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 86  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 131

[Close]
BLAST of IVF0009617 vs. TAIR 10
Match: AT3G53650.1 (Histone superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 6.7e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 73  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 118

[Close]
BLAST of IVF0009617 vs. TAIR 10
Match: AT5G02570.1 (Histone superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 6.7e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 47
           MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 67  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 112

The following BLAST results are available for this feature:
BLAST of IVF0009617 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LQQ44.2e-18100.00Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3[more]
Q9ZUS04.2e-18100.00Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3[more]
P402839.4e-1897.83Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5[more]
Q1S9I99.4e-1897.83Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3[more]
Q9SI969.4e-1897.83Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3[more]
BLAST of IVF0009617 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
M5W0M71.6e-15100.00Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1[more]
M5WDD71.6e-15100.00Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1[more]
A0A6J5XGW81.6e-15100.00Histone H2B OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS36013 PE=3 SV=1[more]
A0A397Y0671.6e-15100.00Histone H2B OS=Brassica campestris OX=3711 GN=BRAA09T40128Z PE=3 SV=1[more]
A0A397ZIS91.6e-15100.00Histone H2B OS=Brassica campestris OX=3711 GN=BRAA04T16298Z PE=3 SV=1[more]
BLAST of IVF0009617 vs. NCBI nr
Match NameE-valueIdentityDescription
VVA96988.18.21e-23100.00unnamed protein product [Arabis nemorensis][more]
XP_008464354.11.04e-22100.00PREDICTED: histone H2B.1, partial [Cucumis melo][more]
GEW92838.11.66e-22100.00histone H2B [Tanacetum cinerariifolium][more]
6M2M_B1.97e-22100.00A role for histone chaperone OsChz1 in histone recognition and deposition [Arabi... [more]
MCI71321.12.12e-2297.83histone H2B [Trifolium medium][more]
BLAST of IVF0009617 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07790.13.0e-19100.00Histone superfamily protein [more]
AT2G37470.13.0e-19100.00Histone superfamily protein [more]
AT2G28720.16.7e-1997.83Histone superfamily protein [more]
AT3G53650.16.7e-1997.83Histone superfamily protein [more]
AT5G02570.16.7e-1997.83Histone superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 37..50
score: 64.22
coord: 20..37
score: 76.51
IPR000558Histone H2BSMARTSM00427h2b3coord: 1..57
e-value: 1.5E-9
score: 47.7
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 1..46
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..53
e-value: 1.2E-23
score: 85.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 1..46
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..42
e-value: 5.7E-10
score: 39.7
NoneNo IPR availablePANTHERPTHR23428:SF176HISTONE H2B.1coord: 1..46

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0009617.4IVF0009617.4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity