IVF0009601 (gene) Melon (IVF77) v1

Overview
NameIVF0009601
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionran guanine nucleotide release factor
Locationchr10: 2409122 .. 2413201 (+)
RNA-Seq ExpressionIVF0009601
SyntenyIVF0009601
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTGGGGTCTCCTATATAAACCGGCCGCGGCCTTCAGAAACTTCCACACCAACGGTGAAGTTTCGTACTTCGATACAAAGGTAAAATTAGTTATTCTTTTTGTAAACAAGAATATTTGTCTTCTCTTTGATTGTTTTCAAAACATTCTGCGTTATCATCTTCCAATGTTGTAGGAGACTTTTGGGTGTTGGTTAACATGTCGGCAGATTTCTCTACAGAGCGTCCTCTGTTCGGCGGCGCTATAGTTAGCACATTTCCTCTTAGATTCCAGGTTGTCTTCTTTAATTCTGATTCTGTCTCTTTCCCTTTTGTGGTATCACTTTTTATATCTTTATTTAATTCGTTAAATTTATATATTTAATTCGTGATTGTTGCAACTCCAGGATGTGAGCAACGTTCGACAAGTTCCTGATCATCAGGTTGGTAGGCATTTGATGCTTCTATGAAGATGATTAAGGTTATTTTTTAGTTAAAGCTACTGAGTTTGGAAAGTTGCTAACGTTTTTTTTTCCCCTCTTTTTTTGAATATGTTTGTGGTGGATTTATAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTCTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTGCCACTGAGCAGGATGCTGAGGGAAGCATGGTAAATCTTACTTTTACTTTATGATATACATTTTCTCCTCTTGCTTACTGCCTGCTCTCTCTGCTGTCAGTTTAACATCCAAGTATTAACTAGTAAGCAACAATTTGAGATGGGTTTGCTTGTTTTGGCCATTAAGTACTTAGTTAGAGAGTGTGTGTTGTTTTATGGGGAAGAAGTAATTATTTATCTAGTAATATCCGTTTCACTCATCACAAAGAAACTACCATCTTTCTTCTGTTATAGTCTTTGGAAATATGAGAAACAAGACCCTGTGTGTGGACTAATGCAGTTTTCTAAGTTTAATTTCAAGAGATTGATGTCACATTTTATGCAGTCAGATGTTATGGGCTAACTCAAAGCACATCCATGTTTTGTTAGCATTTTGCCTTCTGTTTCAATTAGTTTTTATCTATAAATAAGTGTTCGCTTCATTTTTTCATCTTCTTTCAATCCGCACCATCATATTTTATAATGATACTCTGAACTTGAGCTCTTGATGTAATTTCGTGGAATCATGTCGTTTGTTTTACTTATCATGCAATACTTCTTCAGGTGATTGAGCAATCTGGGGTGATCGAGGCACCTGGACTGTGTTATGGAAATATACCTACTGTAGCTACAACTGCCGTTGGCCAATGGTATGTGCTGCTGCTGTGTGTGCTGGTGTATCAATCACATGGCTGGTTGGATATTTTATCTTCAAAACACATTCTTCTTTTCATCACTTTATTTAGTAATTTTTTCGTTTCTCGTACCATTTTTTAGTATAATACTAAGTTTACTTCCTCTAGAAAATTTGCATGCTTGCTATTGTTTAACATAGCCTTCAACTCCAACCATTAGCAATCAAATTAGAGATGTCATGTTACTTTGAATTTGTTTTAATTTTAGAAATTTGGCCTTTTTGTATGTCTTGGGTTAGCTACTTCGGATTTAGTTTCTTATATGCATTGTGTGAATCACTATATTTAGAACTGTTCAGCTGATACGCATATCTCATGAACAAAATGAAAGACAGGTAGAGAGTCACATGCCTGATGCCTCTCTATTATAATTACAAAGTTAATAATAATAACAGCGTACTAACAAAAGGATGACATTGAACGGTACTACTGTTTCATTTAACTGACACAAATCTCTATAGCAAATTCTTTATTAGTCATGCTCAAAGTGGTGCCAGCATTACTAACCAATTTTGTTGTTTCTACTTTTTGGTTATATCTGGCGTGGTTCTTTTGGTTTAAATTTGTTGGGTTGGATGCATCTGCTAAATGTACTAGGCCTGTCAGCACCTTGTTGTTATTTTATTCATGAGGATCATTGGATGTCAGTTGAACTTCGACTTTTCCATGAATTTCTTTCCAGTTTTCCTGCTCAATTGTTGGCAGTTGTTATGGTTGCTAACCTCCATGACTTTGTCACGCTCTTTCTTCCTTTTTTCTAAATGGGTCATCTTTCTGTCCGTTTAGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTAACCTCTCTTATTTTCTTTACCCTAGTGCTTTGGTGGTTCCCAATGCTTTGTAGGATTAATCTGTTTATTACTTTATGCAGGTTTATTTGGCAAATCTACGTCTCAAGGGAGTTGGTACAGATGTGCTAATCTCTGCATATGAACCCATTGTCATAAAGTGAGTAATTACTCTCAAATGAAAGGAAACAATCTATTAGTAAAACCCTAAGTGAAATAGTTAGTCTACTTGATGCGCCACTCCGGCACGTGCTCCCTTGGCAAATTTATTTAAGGGGGCTCACATTCCCCTCACTACAAAGGATACCCTCCATGATACCACAAATTTGACCTGGTCCTCATGTTTTTTCGTTCTTGTGTATTGAAGCGTTTGGGAAACTAGACTTAATCCTATCACTACCCCTTGCCCACACTTTCACTTCAGCCAACCTCTACTGTGAAACATAAAATAGTAGTGTCAGGAACCTCCTGATAGGCAGGACCAACTCTTTTAAATATAGGATTTAGGACCATACTAATGTAAGATGTGTGTTTTTATTCCCCTTCTTGCCGCTGGCCTCTGTCTGTGAAATATGAACAAATATACAAGTTCATCGATCGTTTTAAATTGCTAGCTCTCTTCATACAGTCTACTTGAATAACTGAATGAGTAATTTATATTTCCACTGTCATCACTACAATATAGATCTACCAAGCGGTAACTAATTTGATAGTTAAATAACTAATTATTACCCTCTGTTTTCCTTCTTGTACATGAAGCATAGGGAAAATTTTACTTGTTCAATTTGAATTTTTTTTGCGTGTTCTTAATTTGAAATTTAGGATTAGTTACCATCTGTCATATGCCTATAATCTTTGCTCAAGTTGTTTTGCTTTACATCATAGAATAATGCATACAACGCTTTCTTCTTTACAATGTTGATTGGTTTCCTTTACACCAGGGTTAACAGCCAGATTGAACTGTTAAGATCTAGTATAAGAAAACATGATAATGAGAAACTCAAGAACGTAGAGATGCATCCCGAAAGGATGTTCGACTGTCACAATCATTTTGTAGGGTGATATGGGCCCAAACAGAACCATCCATTTTAATTGGCCAACTTGGCTAAGTTACATTTTTATGTCTGGCCCAGTCTGAAGCAAAGCCCATTTTCTTACTTCATAAATTACAACCCAAATAGGATTCAAACGTGCAGCTAGCATAGCATATCTTTCTTATTGTACCTGTGACTTACAACACTAATACTTATAATTGTGCTACATTGCTGTGGTTGCAGTCCTTTGAGCGAAAGTGCTAGCTCTGTCGGCTCTGGTTTGACCACTCCTGCCTCACACTCAGGTTACATTCCAATGCCTGAGGTATTCAAGCTTGCAGTCTCTAGCTTTAAAGTATGTGACTGGAGCCTTTTCGGTGCGCCTGCCTAACCTAGGAGATAGGATCAGCGTTTGTTCATTGTTATTTCATTAGTATGTTATGTTACATTGGCAATGTTCCCTGCTGCTCTCTTGAGTCGGAAATTGTTTGTAGAGGTTGTAGAGCTGTTCGTTGTTGTTGGGTCTTGATTTTCAATCTACGGAAAAGTTGAAGATATGAAGTAATAGCATATGTGAATGGTAGAAGTGCCCTTTAAGGTGGACAAAATAGAACAAGCATTAGCTGTTTGTAGTAGGACCCCATATTTTTGAATCAGTCAATCACGTGGCAAACAAAAGGTTTGAATATTAAACCGTGACTGACTGGCCATATTATGTAGTCTAGTTTGTGTTTTCACACATGCAATGGTGACCTTTTCTTGGGGGAAAAAAAAAGAAAGAAATTATTGGTGGACGTTTTACATCAAATTATTGTCTAATCTTCTAATAATTGCGAAAGGCAC

mRNA sequence

GCTGGGGTCTCCTATATAAACCGGCCGCGGCCTTCAGAAACTTCCACACCAACGGTGAAGTTTCGTACTTCGATACAAAGGTAAAATTAGTTATTCTTTTTGTAAACAAGAATATTTGTCTTCTCTTTGATTGTTTTCAAAACATTCTGCGTTATCATCTTCCAATGTTGTAGGAGACTTTTGGGTGTTGGTTAACATGTCGGCAGATTTCTCTACAGAGCGTCCTCTGTTCGGCGGCGCTATAGTTAGCACATTTCCTCTTAGATTCCAGGATGTGAGCAACGTTCGACAAGTTCCTGATCATCAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTCTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTGCCACTGAGCAGGATGCTGAGGGAAGCATGGTGATTGAGCAATCTGGGGTGATCGAGGCACCTGGACTGTGTTATGGAAATATACCTACTGTAGCTACAACTGCCGTTGGCCAATGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTTTATTTGGCAAATCTACGTCTCAAGGGAGTTGGTACAGATGTGCTAATCTCTGCATATGAACCCATTGTCATAAATCCTTTGAGCGAAAGTGCTAGCTCTGTCGGCTCTGGTTTGACCACTCCTGCCTCACACTCAGGTTACATTCCAATGCCTGAGGTATTCAAGCTTGCAGTCTCTAGCTTTAAAGTATGTGACTGGAGCCTTTTCGGTGCGCCTGCCTAACCTAGGAGATAGGATCAGCGTTTGTTCATTGTTATTTCATTAGTATGTTATGTTACATTGGCAATGTTCCCTGCTGCTCTCTTGAGTCGGAAATTGTTTGTAGAGGTTGTAGAGCTGTTCGTTGTTGTTGGGTCTTGATTTTCAATCTACGGAAAAGTTGAAGATATGAAGTAATAGCATATGTGAATGGTAGAAGTGCCCTTTAAGGTGGACAAAATAGAACAAGCATTAGCTGTTTGTAGTAGGACCCCATATTTTTGAATCAGTCAATCACGTGGCAAACAAAAGGTTTGAATATTAAACCGTGACTGACTGGCCATATTATGTAGTCTAGTTTGTGTTTTCACACATGCAATGGTGACCTTTTCTTGGGGGAAAAAAAAAGAAAGAAATTATTGGTGGACGTTTTACATCAAATTATTGTCTAATCTTCTAATAATTGCGAAAGGCAC

Coding sequence (CDS)

ATGTCGGCAGATTTCTCTACAGAGCGTCCTCTGTTCGGCGGCGCTATAGTTAGCACATTTCCTCTTAGATTCCAGGATGTGAGCAACGTTCGACAAGTTCCTGATCATCAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTCTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTGCCACTGAGCAGGATGCTGAGGGAAGCATGGTGATTGAGCAATCTGGGGTGATCGAGGCACCTGGACTGTGTTATGGAAATATACCTACTGTAGCTACAACTGCCGTTGGCCAATGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTTTATTTGGCAAATCTACGTCTCAAGGGAGTTGGTACAGATGTGCTAA

Protein sequence

MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQRAGKEEKLKILSGFIWQIYVSRELVQMC
Homology
[Close]
BLAST of IVF0009601 vs. ExPASy Swiss-Prot
Match: A3KPP3 (Ran guanine nucleotide release factor OS=Danio rerio OX=7955 GN=rangrf PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.7e-11
Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 0 

Query: 9  RPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVW 68
          RPLFGGA+ + FP    D+S +RQ+PD+QEVF     D+S+I ELL+++  V D  +A +
Sbjct: 3  RPLFGGALSAVFPSSVMDISELRQIPDNQEVFAHSQTDQSIIIELLEYQSQVQDADAARY 62

Query: 69 FLQDLATEQDA 80
            +D+A    A
Sbjct: 63 HFEDVAGSNKA 73

[Close]
BLAST of IVF0009601 vs. ExPASy Swiss-Prot
Match: Q32PE2 (Ran guanine nucleotide release factor OS=Bos taurus OX=9913 GN=RANGRF PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.2e-09
Identity = 33/77 (42.86%), Postives = 45/77 (58.44%), Query Frame = 0 

Query: 8  ERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAV 67
          + PLFGGA  +T P    DVS++R VPDHQEVF     D+SLI ELL+ +  V    +A 
Sbjct: 6  DNPLFGGAFSATLPPGAIDVSDLRPVPDHQEVFCHRVTDQSLIVELLELQAHVQGEEAAR 65

Query: 68 WFLQDLATEQDAEGSMV 85
          +  +D+   Q+A    V
Sbjct: 66 YHFEDVGGVQEARAVQV 82

[Close]
BLAST of IVF0009601 vs. ExPASy Swiss-Prot
Match: Q9HD47 (Ran guanine nucleotide release factor OS=Homo sapiens OX=9606 GN=RANGRF PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.4e-08
Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 0 

Query: 10 PLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWF 69
          PLFGGA  +  P+   DVS++R VPD+QEVF  P  D+SLI ELL+ +  V    +A + 
Sbjct: 8  PLFGGAFSAILPMGAIDVSDLRPVPDNQEVFCHPVTDQSLIVELLELQAHVRGEAAARYH 67

Query: 70 LQDLATEQDA 80
           +D+   Q A
Sbjct: 68 FEDVGGVQGA 77

[Close]
BLAST of IVF0009601 vs. ExPASy Swiss-Prot
Match: Q9JIB0 (Ran guanine nucleotide release factor OS=Mus musculus OX=10090 GN=Rangrf PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.4e-08
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 0 

Query: 10 PLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWF 69
          PLFGGA  +  P    DVS++R VPD+QEVF  P  D+SLI ELL+ +  V    +A + 
Sbjct: 8  PLFGGAFSAILPTGAIDVSDLRPVPDNQEVFCHPVTDQSLIIELLELQAHVQGEAAARYH 67

Query: 70 LQDLATEQDAEGSMVI 86
           +D+   Q A    V+
Sbjct: 68 FEDVGRVQGARAVHVL 83

[Close]
BLAST of IVF0009601 vs. ExPASy Swiss-Prot
Match: Q54ML6 (Probable ran guanine nucleotide release factor OS=Dictyostelium discoideum OX=44689 GN=mog1 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0 

Query: 1  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
          MS  F  +R L+GGAI    P RF DV++ R +PDHQE+F D   D+S+I EL +F+  +
Sbjct: 1  MSETFE-KRQLYGGAIEIDIPRRFIDVTSYRHIPDHQELFSDEKSDQSVIIELNEFQDHI 60

Query: 61 GDNGSAV 68
            N +A+
Sbjct: 61 -SNANAI 65

[Close]
BLAST of IVF0009601 vs. ExPASy TrEMBL
Match: A0A1S3BEU3 (probable ran guanine nucleotide release factor OS=Cucumis melo OX=3656 GN=LOC103489108 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 114/122 (93.44%), Postives = 115/122 (94.26%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAG 120
           GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQ      R G
Sbjct: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQMAISKGRQG 120

[Close]
BLAST of IVF0009601 vs. ExPASy TrEMBL
Match: A0A0A0KU01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605010 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           MSADFSTER LFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MSADFSTERALFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAG 120
           GDNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAP LCYGNIP+VATTAVGQ      R G
Sbjct: 61  GDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPELCYGNIPSVATTAVGQMAISKGRQG 120

[Close]
BLAST of IVF0009601 vs. ExPASy TrEMBL
Match: A0A5A7SUT7 (Putative ran guanine nucleotide release factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00530 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-53
Identity = 114/136 (83.82%), Postives = 115/136 (84.56%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQ--------------DVSNVRQVPDHQEVFVDPSRD 60
           MSADFSTERPLFGGAIVSTFPLRFQ              DVSNVRQVPDHQEVFVDPSRD
Sbjct: 1   MSADFSTERPLFGGAIVSTFPLRFQVVFFNSDSVSFPFVDVSNVRQVPDHQEVFVDPSRD 60

Query: 61  ESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVAT 120
           ESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVAT
Sbjct: 61  ESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVAT 120

[Close]
BLAST of IVF0009601 vs. ExPASy TrEMBL
Match: A0A6J1DAG6 (probable ran guanine nucleotide release factor OS=Momordica charantia OX=3673 GN=LOC111019159 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.9e-51
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M  DFS+ERPLFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MPEDFSSERPLFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAG 120
           GD+GSAVWFLQDLA+EQDAEG+MVIEQSGVIEAPGLC+GNI +V TTAVGQ      R G
Sbjct: 61  GDSGSAVWFLQDLASEQDAEGNMVIEQSGVIEAPGLCFGNITSVVTTAVGQMAISKGRQG 120

[Close]
BLAST of IVF0009601 vs. ExPASy TrEMBL
Match: A0A6J1JJW2 (probable ran guanine nucleotide release factor OS=Cucurbita maxima OX=3661 GN=LOC111485103 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.9e-51
Identity = 104/122 (85.25%), Postives = 110/122 (90.16%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M+ DFS+ER LFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MAEDFSSERALFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAG 120
            DNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAPGLCY NIP+V TTAVGQ      R G
Sbjct: 61  EDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPGLCYANIPSVVTTAVGQMAISKGRQG 120

[Close]
BLAST of IVF0009601 vs. NCBI nr
Match: XP_008446339.1 (PREDICTED: probable ran guanine nucleotide release factor [Cucumis melo])

HSP 1 Score: 223 bits (569), Expect = 1.18e-71
Identity = 114/122 (93.44%), Postives = 115/122 (94.26%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAG 120
           GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQ      R G
Sbjct: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQMAISKGRQG 120

[Close]
BLAST of IVF0009601 vs. NCBI nr
Match: XP_004135179.1 (ran guanine nucleotide release factor [Cucumis sativus] >KGN51907.1 hypothetical protein Csa_008794 [Cucumis sativus])

HSP 1 Score: 214 bits (545), Expect = 5.27e-68
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           MSADFSTER LFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MSADFSTERALFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAG 120
           GDNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAP LCYGNIP+VATTAVGQ      R G
Sbjct: 61  GDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPELCYGNIPSVATTAVGQMAISKGRQG 120

[Close]
BLAST of IVF0009601 vs. NCBI nr
Match: KAA0034408.1 (putative ran guanine nucleotide release factor [Cucumis melo var. makuwa] >TYK17724.1 putative ran guanine nucleotide release factor [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (544), Expect = 1.96e-67
Identity = 114/136 (83.82%), Postives = 115/136 (84.56%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQ--------------DVSNVRQVPDHQEVFVDPSRD 60
           MSADFSTERPLFGGAIVSTFPLRFQ              DVSNVRQVPDHQEVFVDPSRD
Sbjct: 1   MSADFSTERPLFGGAIVSTFPLRFQVVFFNSDSVSFPFVDVSNVRQVPDHQEVFVDPSRD 60

Query: 61  ESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVAT 120
           ESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVAT
Sbjct: 61  ESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVAT 120

[Close]
BLAST of IVF0009601 vs. NCBI nr
Match: XP_038892350.1 (ran guanine nucleotide release factor [Benincasa hispida])

HSP 1 Score: 206 bits (525), Expect = 5.79e-65
Identity = 105/122 (86.07%), Postives = 110/122 (90.16%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M ADF +ER LFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MPADFCSERGLFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAG 120
            DNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAPGLCYGNIP+V TTAVGQ      R G
Sbjct: 61  CDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPGLCYGNIPSVVTTAVGQMSISKGRQG 120

[Close]
BLAST of IVF0009601 vs. NCBI nr
Match: XP_022151170.1 (probable ran guanine nucleotide release factor [Momordica charantia] >XP_022151171.1 probable ran guanine nucleotide release factor [Momordica charantia])

HSP 1 Score: 205 bits (522), Expect = 1.66e-64
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           M  DFS+ERPLFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDV
Sbjct: 1   MPEDFSSERPLFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAG 120
           GD+GSAVWFLQDLA+EQDAEG+MVIEQSGVIEAPGLC+GNI +V TTAVGQ      R G
Sbjct: 61  GDSGSAVWFLQDLASEQDAEGNMVIEQSGVIEAPGLCFGNITSVVTTAVGQMAISKGRQG 120

[Close]
BLAST of IVF0009601 vs. TAIR 10
Match: AT1G69680.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-42
Identity = 86/122 (70.49%), Postives = 97/122 (79.51%), Query Frame = 0 

Query: 1   MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDV 60
           MS +  + RPLFGGAI + FP RFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFK +V
Sbjct: 1   MSVELCSVRPLFGGAISTVFPQRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKAEV 60

Query: 61  GDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAG 120
           GD GSA WFL DLA+EQDAEG  +IEQS VIEAPGL + NI  VATTA+G+      R G
Sbjct: 61  GDIGSASWFLNDLASEQDAEGFQLIEQSEVIEAPGLSFRNISAVATTAIGEMAISKGRQG 120

The following BLAST results are available for this feature:
BLAST of IVF0009601 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A3KPP36.7e-1143.66Ran guanine nucleotide release factor OS=Danio rerio OX=7955 GN=rangrf PE=2 SV=1[more]
Q32PE28.2e-0942.86Ran guanine nucleotide release factor OS=Bos taurus OX=9913 GN=RANGRF PE=2 SV=1[more]
Q9HD472.4e-0844.29Ran guanine nucleotide release factor OS=Homo sapiens OX=9606 GN=RANGRF PE=1 SV=... [more]
Q9JIB02.4e-0842.11Ran guanine nucleotide release factor OS=Mus musculus OX=10090 GN=Rangrf PE=1 SV... [more]
Q54ML61.2e-0744.78Probable ran guanine nucleotide release factor OS=Dictyostelium discoideum OX=44... [more]
BLAST of IVF0009601 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BEU32.5e-5693.44probable ran guanine nucleotide release factor OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A0A0KU011.5e-5390.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605010 PE=3 SV=1[more]
A0A5A7SUT71.9e-5383.82Putative ran guanine nucleotide release factor OS=Cucumis melo var. makuwa OX=11... [more]
A0A6J1DAG66.9e-5184.43probable ran guanine nucleotide release factor OS=Momordica charantia OX=3673 GN... [more]
A0A6J1JJW26.9e-5185.25probable ran guanine nucleotide release factor OS=Cucurbita maxima OX=3661 GN=LO... [more]
BLAST of IVF0009601 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008446339.11.18e-7193.44PREDICTED: probable ran guanine nucleotide release factor [Cucumis melo][more]
XP_004135179.15.27e-6890.16ran guanine nucleotide release factor [Cucumis sativus] >KGN51907.1 hypothetical... [more]
KAA0034408.11.96e-6783.82putative ran guanine nucleotide release factor [Cucumis melo var. makuwa] >TYK17... [more]
XP_038892350.15.79e-6586.07ran guanine nucleotide release factor [Benincasa hispida][more]
XP_022151170.11.66e-6484.43probable ran guanine nucleotide release factor [Momordica charantia] >XP_0221511... [more]
BLAST of IVF0009601 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G69680.11.2e-4270.49Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 5..136
e-value: 1.3E-27
score: 98.8
NoneNo IPR availablePANTHERPTHR15837:SF4BNAA07G24140D PROTEINcoord: 2..116
IPR007681Ran-interacting Mog1 proteinPFAMPF04603Mog1coord: 10..122
e-value: 5.5E-27
score: 94.8
IPR007681Ran-interacting Mog1 proteinPANTHERPTHR15837RAN GUANINE NUCLEOTIDE RELEASE FACTORcoord: 2..116
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 7..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0009601.6IVF0009601.6mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006606 protein import into nucleus
biological_process GO:0050790 regulation of catalytic activity
cellular_component GO:0005634 nucleus
molecular_function GO:0005085 guanyl-nucleotide exchange factor activity
molecular_function GO:0031267 small GTPase binding