IVF0009586 (gene) Melon (IVF77) v1

Overview


Name	IVF0009586
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Flocculation protein FLO11-like
Location	chr09: 3030243 .. 3031491 (-)
RNA-Seq Expression	IVF0009586
Synteny	IVF0009586

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCCTCTCCTTCAAAGTCGGCAACTTCCTCGAAGGGCAAACGGTACAAAGGAATCCCGACTAAGCATCCATATAAGAAGTTTGCAAGTCAATTCCGAATGGTGACAACAGTGCTGTTACCAGTCTTGAGCGCAGCTCCCACGCAGAGCGATCGACGAATCCCCCTTCTCCAATTACGGTTAAGAAAGAAGTCCCCGAGTTTTCATCGCCTCAGAGTGTTCGTCCTTCTGTATCTTCTTCTGTGCCAAAGTCGACCTCAAGGCCTGAACCTAGGGTTTTCGTGGAAACCGTGGTATTAGACTCTGACTCATCAGACAGTGAGGACAATGTTGTCTTATCTACTCTTCTTCATCGAACGAGAGGAGTTCGCACCAATCAAACCCCTTCTCCTACAAAACCACAGTCAAGAGAAGTTTCGTCTCCTAAGGAGGCTCCGCCCCGAACTAGTGACCATGGTAAGTACTCCGCTGCTCCTTCATTTCAGGTCTCTCCCCAAACTCCTCTTCCCTCTATTACGGAAGACAATGATGACTCTGATGATGAAGATTATGTTCCTGGAACGGAAGAAAAGACAGAGCCTGAAGTCACGTCGACATCTACTGAGGATTATAGTGCATCTCATGTAAAGGACCCATCTGATCACAAATCAACTAAAGATTTGGGTGAGTCGTCGATTCCTAGGTCAACTGAAGGACCAGGTGAGTTCTCGATTCCTGTGTCTCCACCAGGACATGTGGCATCCTCCTCTGGTCCTCGACGCCCCCTTGCCAGCGAGTTGTCTCCACCAAGGCTGGACGACGGAAGGTACCTCCTAATGTGCCATCCGTACTAATTGATGGTGTATCTTTTCACTCTGAGGAAGGTGCACATAAATGGAAATATGTGGTAAAGCGGCGAATTGCAGACGAGGCTAATATTGCTGATCAGTACAACTCTTGTCCTGCCATTCTTGATTTGATACACAATGCGGGGCTTATTCGTACTGTCTCTGAGGTTGGCCCATTTTATTCGCGACTCATGCGAGAGCTAATTATGAATTTACCTTCAGACTTCAATGATCCGAGTGCTGACGAGTATCAAAAGGTACATATTCATGGTATCTGCTTCAACGTGTCTCCTGAATTACTGAATACCTATCTGGGACTCTCTCTGCCTGTTGACTATGCTGTTTCATACCCTACTCCTGAACGTCTGGCTGAAGAACTTATCGGTGGAACAGTCCCTGTGTGGCCAGTCGATGGATAG

mRNA sequence

ATGGCTCCCTCTCCTTCAAAGTCGGCAACTTCCTCGAAGGGCAAACGGTACAAAGGAATCCCGACTAAGCATCCATATAAGAAGTTTGCAAGTCAATTCCGAATGGTGACAACAGAGGCTCCGCCCCGAACTAGTGACCATGGTAAGTACTCCGCTGCTCCTTCATTTCAGGTCTCTCCCCAAACTCCTCTTCCCTCTATTACGGAAGACAATGATGACTCTGATGATGAAGATTATGTTCCTGGAACGGAAGAAAAGACAGAGCCTGAAGTCACGTCGACATCTACTGAGGATTATAGTGCATCTCATGTAAAGGACCCATCTGATCACAAATCAACTAAAGATTTGGGTGAGTCGTCGATTCCTAGGACATGTGGCATCCTCCTCTGGTCCTCGACGCCCCCTTGCCAGCGAGTTGTCTCCACCAAGGCTGGACGACGGAAGGTACCTCCTAATGTGCCATCCGTACTAATTGATGGTGTATCTTTTCACTCTGAGGAAGGTGCACATAAATGGAAATATGTGGTAAAGCGGCGAATTGCAGACGAGGCTAATATTGCTGATCAGTACAACTCTTGTCCTGCCATTCTTGATTTGATACACAATGCGGGGCTTATTCGTACTGTCTCTGAGGTTGGCCCATTTTATTCGCGACTCATGCGAGAGCTAATTATGAATTTACCTTCAGACTTCAATGATCCGAGTGCTGACGAGTATCAAAAGGTACATATTCATGGTATCTGCTTCAACGTGTCTCCTGAATTACTGAATACCTATCTGGGACTCTCTCTGCCTGTTGACTATGCTGTTTCATACCCTACTCCTGAACGTCTGGCTGAAGAACTTATCGGTGGAACAGTCCCTGTGTGGCCAGTCGATGGATAG

Coding sequence (CDS)

ATGGCTCCCTCTCCTTCAAAGTCGGCAACTTCCTCGAAGGGCAAACGGTACAAAGGAATCCCGACTAAGCATCCATATAAGAAGTTTGCAAGTCAATTCCGAATGGTGACAACAGAGGCTCCGCCCCGAACTAGTGACCATGGTAAGTACTCCGCTGCTCCTTCATTTCAGGTCTCTCCCCAAACTCCTCTTCCCTCTATTACGGAAGACAATGATGACTCTGATGATGAAGATTATGTTCCTGGAACGGAAGAAAAGACAGAGCCTGAAGTCACGTCGACATCTACTGAGGATTATAGTGCATCTCATGTAAAGGACCCATCTGATCACAAATCAACTAAAGATTTGGGTGAGTCGTCGATTCCTAGGACATGTGGCATCCTCCTCTGGTCCTCGACGCCCCCTTGCCAGCGAGTTGTCTCCACCAAGGCTGGACGACGGAAGGTACCTCCTAATGTGCCATCCGTACTAATTGATGGTGTATCTTTTCACTCTGAGGAAGGTGCACATAAATGGAAATATGTGGTAAAGCGGCGAATTGCAGACGAGGCTAATATTGCTGATCAGTACAACTCTTGTCCTGCCATTCTTGATTTGATACACAATGCGGGGCTTATTCGTACTGTCTCTGAGGTTGGCCCATTTTATTCGCGACTCATGCGAGAGCTAATTATGAATTTACCTTCAGACTTCAATGATCCGAGTGCTGACGAGTATCAAAAGGTACATATTCATGGTATCTGCTTCAACGTGTCTCCTGAATTACTGAATACCTATCTGGGACTCTCTCTGCCTGTTGACTATGCTGTTTCATACCCTACTCCTGAACGTCTGGCTGAAGAACTTATCGGTGGAACAGTCCCTGTGTGGCCAGTCGATGGATAG

Protein sequence

MAPSPSKSATSSKGKRYKGIPTKHPYKKFASQFRMVTTEAPPRTSDHGKYSAAPSFQVSPQTPLPSITEDNDDSDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGESSIPRTCGILLWSSTPPCQRVVSTKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKRRIADEANIADQYNSCPAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSPELLNTYLGLSLPVDYAVSYPTPERLAEELIGGTVPVWPVDG

Homology

[Close]

BLAST of IVF0009586 vs. ExPASy TrEMBL
Match: A0A5D3BV39 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00510 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 8.2e-115
Identity = 222/281 (79.00%), Postives = 231/281 (82.21%), Query Frame = 0


Query: 16  RYKGIPTKHPYKKFASQFRMVTT--EAPPRTSDHGKYSAAPSFQVSPQTPLPSITEDNDD 75
           R +G+ T         Q R V++  EAPPRTSDHGKYSAAPSFQVSPQTPLPSITEDNDD
Sbjct: 688 RTRGVRTNQTPSPTKPQSREVSSPKEAPPRTSDHGKYSAAPSFQVSPQTPLPSITEDNDD 747

Query: 76  SDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGESSIPRTCGILLWSST 135
           SDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGESSIPR+         
Sbjct: 748 SDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGESSIPRS--------- 807

Query: 136 PPCQRVVSTKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKRRIADEANIADQYNSC 195
                  +   G   +P + P  +       S  GAHKWKYVVKRRIADEANIADQYNSC
Sbjct: 808 -------TEGPGEFSIPVSPPGHVA------SSSGAHKWKYVVKRRIADEANIADQYNSC 867

Query: 196 PAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSP 255
           PAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSP
Sbjct: 868 PAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSP 927

Query: 256 ELLNTYLGLSLPVDYAVSYPTPERLAEELIGGTVPVWPVDG 295
           ELLNTYLGLSLPVDYAVSYPTPERLAEELIGGTVPVWPVDG
Sbjct: 928 ELLNTYLGLSLPVDYAVSYPTPERLAEELIGGTVPVWPVDG 946

[Close]

BLAST of IVF0009586 vs. ExPASy TrEMBL
Match: A0A5A7V603 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001610 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 3.2e-103
Identity = 213/356 (59.83%), Postives = 231/356 (64.89%), Query Frame = 0


Query: 1   MAPSPSKSATSSKGKRYKGIPTKHPYKKFASQF--------------------------- 60
           MAPSP KS TS KGKR+K I TKHPYKK                                
Sbjct: 423 MAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNPS 482

Query: 61  ---------------------------------RMVTT--EAPPRTSDHGKYSAAPSFQV 120
                                            R V++  E PPRTSDH KY  APSFQ 
Sbjct: 483 SPVMVKKEVPDLLYYSSSKEGSNQTHFPAKPKPREVSSPKEVPPRTSDHSKYFVAPSFQA 542

Query: 121 SPQTPLPSITEDNDDSDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGE 180
           SPQT LPS+ ED+DD+DDEDYVP TEEKT PE TSTS ED+S  H K PSDH+ST+    
Sbjct: 543 SPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTE---- 602

Query: 181 SSIPRTCGILLWSSTPPCQRVVSTKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKR 240
                             + V+STKAGR+K+PPNVP V IDGVSFHSEE AHKW YVVKR
Sbjct: 603 ------------------EPVISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKR 662

Query: 241 RIADEANIADQYNSCPAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADE 295
           RIADEANI DQYNS PAILDLI N  LIRTVS+VGPFY RLMRELI+NLPSDFNDPSADE
Sbjct: 663 RIADEANIVDQYNSYPAILDLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADE 722

[Close]

BLAST of IVF0009586 vs. ExPASy TrEMBL
Match: A0A5D3CWQ1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00800 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 5.5e-103
Identity = 215/356 (60.39%), Postives = 232/356 (65.17%), Query Frame = 0


Query: 1   MAPSPSKSATSSKGKRYKGIPTKHPYKK---------------FASQFR----------- 60
           MAPSP KS TS KGKR+K I TKHPYKK                +S  R           
Sbjct: 394 MAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNPS 453

Query: 61  ---MVTTEAP---------------------------------PRTSDHGKYSAAPSFQV 120
              MV  E P                                 PRTSDH KY  APSFQ 
Sbjct: 454 SPVMVKKEVPDLLYYSSSKEGSNQTHFPAKPKPREVSSPKEVLPRTSDHSKYFVAPSFQA 513

Query: 121 SPQTPLPSITEDNDDSDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGE 180
           SPQT LPS+ ED+DD+DDEDYVP TEEKT PE TSTS ED+S  H K PSDH+ST+    
Sbjct: 514 SPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTE---- 573

Query: 181 SSIPRTCGILLWSSTPPCQRVVSTKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKR 240
                             + V+STKAGR+K+PPNVP V IDGVSFHSEE AHKW YVVKR
Sbjct: 574 ------------------EPVISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKR 633

Query: 241 RIADEANIADQYNSCPAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADE 295
           RIADEANI DQYNS PAILDLI N  LIRTVS+VGPFY RLMRELI+NLPSDFNDPSADE
Sbjct: 634 RIADEANIVDQYNSYPAILDLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADE 693

[Close]

BLAST of IVF0009586 vs. ExPASy TrEMBL
Match: A0A5D3DJ92 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00100 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 8.8e-101
Identity = 210/341 (61.58%), Postives = 229/341 (67.16%), Query Frame = 0


Query: 7   KSATSSKGKRYKGIPTKHPYKKFASQFRMVTTE--------------------------- 66
           KS TSSKGKRYKGIPTKHPYKK       V                              
Sbjct: 34  KSITSSKGKRYKGIPTKHPYKKVCKSIPSVPKSSSRPEPRVSVETVVLDSDSSESDDNAS 93

Query: 67  -------APPRTSDHGKYSAAPSFQVSPQTPLP-SITEDNDDSDDEDYVPGTEEKTEPEV 126
                  A PR S+H KY   PS Q SP+T  P    +D+DDSDDEDY PGT+EKTE E 
Sbjct: 94  GGVSPKVASPRPSEHTKYFGTPSSQASPKTAPPCEADDDDDDSDDEDYAPGTKEKTEAEA 153

Query: 127 TSTSTEDYSASHVKDPSDHKSTKDLGESSIPRTCGILLWSSTPPC--------------- 186
           TSTSTE+ SAS  KDP DH+ST++ GESSIPR+      SSTP                 
Sbjct: 154 TSTSTENQSASPEKDPYDHRSTEEPGESSIPRSTEGPSESSTPVSTLAHVASSSGFRRPP 213

Query: 187 ---QRVVSTKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKRRIADEANIADQYNSC 246
              QRVVSTK GR+KVPPNVPSV IDGVSFHSEE AHKWKYVVKR+I DEANI D+ N  
Sbjct: 214 TKGQRVVSTKTGRQKVPPNVPSVPIDGVSFHSEEEAHKWKYVVKRQIMDEANIVDRDNFY 273

Query: 247 PAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSP 295
           PAIL+LI N  LI TVSEVGPFY RLMRELI+NLPSDFNDPS DEYQKVHI G+CFNVS 
Sbjct: 274 PAILELIRNVRLIHTVSEVGPFYPRLMRELIVNLPSDFNDPSGDEYQKVHIRGVCFNVSS 333

[Close]

BLAST of IVF0009586 vs. ExPASy TrEMBL
Match: A0A5A7TV21 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00580 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.5e-97
Identity = 193/274 (70.44%), Postives = 214/274 (78.10%), Query Frame = 0


Query: 40  APPRTSDHGKYSAAPSFQVSPQTPLPSITED-NDDSDDEDYVPGTEEKTEPEVTSTSTED 99
           APPR S+H KYS  PS Q SP+T  P   +D +DDSDDEDY PGTEEKT+ E TSTSTE+
Sbjct: 173 APPRPSEHTKYSGTPSSQASPKTVPPGEADDEDDDSDDEDYAPGTEEKTKAETTSTSTEN 232

Query: 100 YSASHVKDPSDHKSTKDLGESSIPR-------------TCGILLWSST---PPC--QRVV 159
            SAS  KDPSDH+ST++ GESSIPR             T   +  SS+   PP   QRVV
Sbjct: 233 QSASPKKDPSDHRSTEESGESSIPRSTEGPSEFSTLVSTPAHVASSSSFRGPPTKGQRVV 292

Query: 160 STKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKRRIADEANIADQYNSCPAILDLI 219
           STK GRRKVPPNV S+ IDGVSFHSEEGAHKWKYVVKRRIADEA IAD YN CP IL+LI
Sbjct: 293 STKDGRRKVPPNVSSIPIDGVSFHSEEGAHKWKYVVKRRIADEAYIADPYNFCPTILELI 352

Query: 220 HNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSPELLNTYL 279
            N  LIRT+SEVGPFY RLMRELI++LPSDFNDPSADEYQKVHI G+CFNVS ELLN+YL
Sbjct: 353 RNVRLIRTISEVGPFYLRLMRELIVSLPSDFNDPSADEYQKVHIRGVCFNVSLELLNSYL 412

Query: 280 GLSLPVDYAVSYPTPERLAEELIGGTVPVWPVDG 295
           G++LP DYAV YP+PERL EEL GGTVPVWPVDG
Sbjct: 413 GITLPADYAVPYPSPERLVEELTGGTVPVWPVDG 446

[Close]

BLAST of IVF0009586 vs. NCBI nr
Match: KAA0037483.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK01959.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 419 bits (1077), Expect = 1.73e-136
Identity = 222/281 (79.00%), Postives = 231/281 (82.21%), Query Frame = 0


Query: 16  RYKGIPTKHPYKKFASQFRMVTT--EAPPRTSDHGKYSAAPSFQVSPQTPLPSITEDNDD 75
           R +G+ T         Q R V++  EAPPRTSDHGKYSAAPSFQVSPQTPLPSITEDNDD
Sbjct: 688 RTRGVRTNQTPSPTKPQSREVSSPKEAPPRTSDHGKYSAAPSFQVSPQTPLPSITEDNDD 747

Query: 76  SDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGESSIPRTCGILLWSST 135
           SDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGESSIPR+         
Sbjct: 748 SDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGESSIPRS--------- 807

Query: 136 PPCQRVVSTKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKRRIADEANIADQYNSC 195
                  +   G   +P + P  +       S  GAHKWKYVVKRRIADEANIADQYNSC
Sbjct: 808 -------TEGPGEFSIPVSPPGHVA------SSSGAHKWKYVVKRRIADEANIADQYNSC 867

Query: 196 PAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSP 255
           PAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSP
Sbjct: 868 PAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSP 927

Query: 256 ELLNTYLGLSLPVDYAVSYPTPERLAEELIGGTVPVWPVDG 294
           ELLNTYLGLSLPVDYAVSYPTPERLAEELIGGTVPVWPVDG
Sbjct: 928 ELLNTYLGLSLPVDYAVSYPTPERLAEELIGGTVPVWPVDG 946

[Close]

BLAST of IVF0009586 vs. NCBI nr
Match: KAA0058927.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23704.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 371 bits (953), Expect = 9.26e-123
Identity = 210/341 (61.58%), Postives = 229/341 (67.16%), Query Frame = 0


Query: 7   KSATSSKGKRYKGIPTKHPYKKFASQFRMVTTE--------------------------- 66
           KS TSSKGKRYKGIPTKHPYKK       V                              
Sbjct: 34  KSITSSKGKRYKGIPTKHPYKKVCKSIPSVPKSSSRPEPRVSVETVVLDSDSSESDDNAS 93

Query: 67  -------APPRTSDHGKYSAAPSFQVSPQTPLP-SITEDNDDSDDEDYVPGTEEKTEPEV 126
                  A PR S+H KY   PS Q SP+T  P    +D+DDSDDEDY PGT+EKTE E 
Sbjct: 94  GGVSPKVASPRPSEHTKYFGTPSSQASPKTAPPCEADDDDDDSDDEDYAPGTKEKTEAEA 153

Query: 127 TSTSTEDYSASHVKDPSDHKSTKDLGESSIPRTCGILLWSSTPPC--------------- 186
           TSTSTE+ SAS  KDP DH+ST++ GESSIPR+      SSTP                 
Sbjct: 154 TSTSTENQSASPEKDPYDHRSTEEPGESSIPRSTEGPSESSTPVSTLAHVASSSGFRRPP 213

Query: 187 ---QRVVSTKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKRRIADEANIADQYNSC 246
              QRVVSTK GR+KVPPNVPSV IDGVSFHSEE AHKWKYVVKR+I DEANI D+ N  
Sbjct: 214 TKGQRVVSTKTGRQKVPPNVPSVPIDGVSFHSEEEAHKWKYVVKRQIMDEANIVDRDNFY 273

Query: 247 PAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSP 294
           PAIL+LI N  LI TVSEVGPFY RLMRELI+NLPSDFNDPS DEYQKVHI G+CFNVS 
Sbjct: 274 PAILELIRNVRLIHTVSEVGPFYPRLMRELIVNLPSDFNDPSGDEYQKVHIRGVCFNVSS 333

[Close]

BLAST of IVF0009586 vs. NCBI nr
Match: KAA0063048.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 379 bits (973), Expect = 5.47e-121
Identity = 213/356 (59.83%), Postives = 231/356 (64.89%), Query Frame = 0


Query: 1   MAPSPSKSATSSKGKRYKGIPTKHPYKKFASQF--------------------------- 60
           MAPSP KS TS KGKR+K I TKHPYKK                                
Sbjct: 423 MAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNPS 482

Query: 61  ---------------------------------RMVTT--EAPPRTSDHGKYSAAPSFQV 120
                                            R V++  E PPRTSDH KY  APSFQ 
Sbjct: 483 SPVMVKKEVPDLLYYSSSKEGSNQTHFPAKPKPREVSSPKEVPPRTSDHSKYFVAPSFQA 542

Query: 121 SPQTPLPSITEDNDDSDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGE 180
           SPQT LPS+ ED+DD+DDEDYVP TEEKT PE TSTS ED+S  H K PSDH+ST++   
Sbjct: 543 SPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTEEP-- 602

Query: 181 SSIPRTCGILLWSSTPPCQRVVSTKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKR 240
                               V+STKAGR+K+PPNVP V IDGVSFHSEE AHKW YVVKR
Sbjct: 603 --------------------VISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKR 662

Query: 241 RIADEANIADQYNSCPAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADE 294
           RIADEANI DQYNS PAILDLI N  LIRTVS+VGPFY RLMRELI+NLPSDFNDPSADE
Sbjct: 663 RIADEANIVDQYNSYPAILDLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADE 722

[Close]

BLAST of IVF0009586 vs. NCBI nr
Match: TYK16303.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 378 bits (971), Expect = 5.75e-121
Identity = 215/356 (60.39%), Postives = 232/356 (65.17%), Query Frame = 0


Query: 1   MAPSPSKSATSSKGKRYKGIPTKHPYKKF---------------ASQFR----------- 60
           MAPSP KS TS KGKR+K I TKHPYKK                +S  R           
Sbjct: 394 MAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNPS 453

Query: 61  ---MVTTEAP---------------------------------PRTSDHGKYSAAPSFQV 120
              MV  E P                                 PRTSDH KY  APSFQ 
Sbjct: 454 SPVMVKKEVPDLLYYSSSKEGSNQTHFPAKPKPREVSSPKEVLPRTSDHSKYFVAPSFQA 513

Query: 121 SPQTPLPSITEDNDDSDDEDYVPGTEEKTEPEVTSTSTEDYSASHVKDPSDHKSTKDLGE 180
           SPQT LPS+ ED+DD+DDEDYVP TEEKT PE TSTS ED+S  H K PSDH+ST++   
Sbjct: 514 SPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTEEP-- 573

Query: 181 SSIPRTCGILLWSSTPPCQRVVSTKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKR 240
                               V+STKAGR+K+PPNVP V IDGVSFHSEE AHKW YVVKR
Sbjct: 574 --------------------VISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKR 633

Query: 241 RIADEANIADQYNSCPAILDLIHNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADE 294
           RIADEANI DQYNS PAILDLI N  LIRTVS+VGPFY RLMRELI+NLPSDFNDPSADE
Sbjct: 634 RIADEANIVDQYNSYPAILDLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADE 693

[Close]

BLAST of IVF0009586 vs. NCBI nr
Match: XP_008457140.1 (PREDICTED: flocculation protein FLO11-like [Cucumis melo] >KAA0047403.1 flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK14079.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 360 bits (924), Expect = 6.23e-118
Identity = 193/274 (70.44%), Postives = 214/274 (78.10%), Query Frame = 0


Query: 40  APPRTSDHGKYSAAPSFQVSPQTPLPSITED-NDDSDDEDYVPGTEEKTEPEVTSTSTED 99
           APPR S+H KYS  PS Q SP+T  P   +D +DDSDDEDY PGTEEKT+ E TSTSTE+
Sbjct: 173 APPRPSEHTKYSGTPSSQASPKTVPPGEADDEDDDSDDEDYAPGTEEKTKAETTSTSTEN 232

Query: 100 YSASHVKDPSDHKSTKDLGESSIPR-------------TCGILLWSST---PPC--QRVV 159
            SAS  KDPSDH+ST++ GESSIPR             T   +  SS+   PP   QRVV
Sbjct: 233 QSASPKKDPSDHRSTEESGESSIPRSTEGPSEFSTLVSTPAHVASSSSFRGPPTKGQRVV 292

Query: 160 STKAGRRKVPPNVPSVLIDGVSFHSEEGAHKWKYVVKRRIADEANIADQYNSCPAILDLI 219
           STK GRRKVPPNV S+ IDGVSFHSEEGAHKWKYVVKRRIADEA IAD YN CP IL+LI
Sbjct: 293 STKDGRRKVPPNVSSIPIDGVSFHSEEGAHKWKYVVKRRIADEAYIADPYNFCPTILELI 352

Query: 220 HNAGLIRTVSEVGPFYSRLMRELIMNLPSDFNDPSADEYQKVHIHGICFNVSPELLNTYL 279
            N  LIRT+SEVGPFY RLMRELI++LPSDFNDPSADEYQKVHI G+CFNVS ELLN+YL
Sbjct: 353 RNVRLIRTISEVGPFYLRLMRELIVSLPSDFNDPSADEYQKVHIRGVCFNVSLELLNSYL 412

Query: 280 GLSLPVDYAVSYPTPERLAEELIGGTVPVWPVDG 294
           G++LP DYAV YP+PERL EEL GGTVPVWPVDG
Sbjct: 413 GITLPADYAVPYPSPERLVEELTGGTVPVWPVDG 446

The following BLAST results are available for this feature:

BLAST of IVF0009586 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009586 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BV39	8.2e-115	79.00	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7V603	3.2e-103	59.83	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G...	[more]
A0A5D3CWQ1	5.5e-103	60.39	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0...	[more]
A0A5D3DJ92	8.8e-101	61.58	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TV21	4.5e-97	70.44	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

Pages

BLAST of IVF0009586 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037483.1	1.73e-136	79.00	flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK01959.1 flocculat...	[more]
KAA0058927.1	9.26e-123	61.58	flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23704.1 flocculat...	[more]
KAA0063048.1	5.47e-121	59.83	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK16303.1	5.75e-121	60.39	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
XP_008457140.1	6.23e-118	70.44	PREDICTED: flocculation protein FLO11-like [Cucumis melo] >KAA0047403.1 floccula...	[more]

BLAST of IVF0009586 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009586.1	IVF0009586.1	mRNA