IVF0009547 (gene) Melon (IVF77) v1

Overview
NameIVF0009547
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr02: 17065552 .. 17065821 (+)
RNA-Seq ExpressionIVF0009547
SyntenyIVF0009547
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGGAGGTTAGCAGGGAGTTGACTCCATCCCATGTTTGCCGCAAATCCCATCCCCAAGTCTCGTAGTTGCCCGAGAAGCACAAAATGGCTATTAGTGAGGTTGAAGAAGTCGAAAAATCAAATTTAATGAAGACTGATATAGTTTCGGCCAAGCCAAAACTATTGCCCAATAAGAAATCAAAGGAAGTTGAAAAGACTTCTTTGAGGAGGACAGAGAAAAGAGTGGACAATTTAATTAGTTTGACCAATTGGTTCTCGCTTTAG

mRNA sequence

ATGGAAAAGGAGGTTAGCAGGGAGTTGACTCCATCCCATGTTTGCCGCAAATCCCATCCCCAAGTCTCGTATGAGGTTGAAGAAGTCGAAAAATCAAATTTAATGAAGACTGATATAGTTTCGGCCAAGCCAAAACTATTGCCCAATAAGAAATCAAAGGAAGTTGAAAAGACTTCTTTGAGGAGGACAGAGAAAAGAGTGGACAATTTAATTAGTTTGACCAATTGGTTCTCGCTTTAG

Coding sequence (CDS)

ATGGAAAAGGAGGTTAGCAGGGAGTTGACTCCATCCCATGTTTGCCGCAAATCCCATCCCCAAGTCTCGTATGAGGTTGAAGAAGTCGAAAAATCAAATTTAATGAAGACTGATATAGTTTCGGCCAAGCCAAAACTATTGCCCAATAAGAAATCAAAGGAAGTTGAAAAGACTTCTTTGAGGAGGACAGAGAAAAGAGTGGACAATTTAATTAGTTTGACCAATTGGTTCTCGCTTTAG

Protein sequence

MEKEVSRELTPSHVCRKSHPQVSYEVEEVEKSNLMKTDIVSAKPKLLPNKKSKEVEKTSLRRTEKRVDNLISLTNWFSL
Homology
[Close]
BLAST of IVF0009547 vs. ExPASy TrEMBL
Match: A0A0A0M3I8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690330 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.7e-12
Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 0 

Query: 1   MEKEVSRELTPSHVCRKSHPQVS----------YEVEEVEKSNLMKTDIVSAKPKLLPNK 58
           MEKEV REL  SHVCRKSHPQVS           + EE+E+SNLMKT+ VS KPKLLPNK
Sbjct: 87  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEIERSNLMKTEKVSVKPKLLPNK 146

[Close]
BLAST of IVF0009547 vs. NCBI nr
Match: KAE8637489.1 (hypothetical protein CSA_016971 [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 4.73e-18
Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 0 

Query: 1  MEKEVSRELTPSHVCRKSHPQVSY----------EVEEVEKSNLMKTDIVSAKPKLLPNK 60
          MEKEV REL  SHVCRKSHPQVS           + EE+E+SNLMKT+ VS KPKLLPNK
Sbjct: 1  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEIERSNLMKTEKVSVKPKLLPNK 60

Query: 61 KSKEVEKTSLRRTEKRV--DNLISLTNW 76
          KSKEVEK      E++   +N  +L  W
Sbjct: 61 KSKEVEKVFKEDRERKTLDNNQDNLAGW 88

[Close]
BLAST of IVF0009547 vs. NCBI nr
Match: KAE8653625.1 (hypothetical protein Csa_007524 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 5.76e-17
Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 0 

Query: 1  MEKEVSRELTPSHVCRKSHPQVSY----------EVEEVEKSNLMKTDIVSAKPKLLPNK 57
          MEKEV REL  SHVCRKSHPQVS           + EE+E+SNLMKT+ VS KPKLLPNK
Sbjct: 1  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEIERSNLMKTEKVSVKPKLLPNK 60

The following BLAST results are available for this feature:
BLAST of IVF0009547 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0009547 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M3I82.7e-1268.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690330 PE=4 SV=1[more]
BLAST of IVF0009547 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8637489.14.73e-1856.82hypothetical protein CSA_016971 [Cucumis sativus][more]
KAE8653625.15.76e-1768.66hypothetical protein Csa_007524 [Cucumis sativus][more]
BLAST of IVF0009547 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0009547.1IVF0009547.1mRNA