IVF0009538 (gene) Melon (IVF77) v1

Overview


Name	IVF0009538
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Drebrin-like
Location	chr11: 12553796 .. 12554158 (+)
RNA-Seq Expression	IVF0009538
Synteny	IVF0009538

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGTATTAAGTTGGTTTACTACATAAAGAAGCATCTTCTAGTGAACATAGGCGAGATGATAAGCGAGCACATAATAGCTTGGGTCAAGCATCCTTGCGGACTAAGACCCTTTCCGCAGTTAATAGAAAGATTGTGCTTGAAGACATACTCGACGTTAGAACAATTTCCTCAAGTAGAGTTGAAGGATGGGGTTTGGACTGTAGCAACTCTTCACCGCATAATTGCTGTCCATAAGAACAAGGCAAAGTTTAAACGCCACAAAACCAAACAAGATGGTAAATCCGAAGTTGAGAAAGTTGATGAGGAAGCTGAAGATGAGAAAGAGGATGAAGAAGTCCCACTAAAATGCAAACGGTAA

mRNA sequence

ATGGAGCGTATTAAGTTGGTTTACTACATAAAGAAGCATCTTCTAGTGAACATAGGCGAGATGATAAGCGAGCACATAATAGCTTGGGTCAAGCATCCTTGCGGACTAAGACCCTTTCCGCAGTTAATAGAAAGATTGTGCTTGAAGACATACTCGACGTTAGAACAATTTCCTCAAGTAGAGTTGAAGGATGGGGTTTGGACTGTAGCAACTCTTCACCGCATAATTGCTGTCCATAAGAACAAGGCAAAGTTTAAACGCCACAAAACCAAACAAGATGGTAAATCCGAAGTTGAGAAAGTTGATGAGGAAGCTGAAGATGAGAAAGAGGATGAAGAAGTCCCACTAAAATGCAAACGGTAA

Coding sequence (CDS)

ATGGAGCGTATTAAGTTGGTTTACTACATAAAGAAGCATCTTCTAGTGAACATAGGCGAGATGATAAGCGAGCACATAATAGCTTGGGTCAAGCATCCTTGCGGACTAAGACCCTTTCCGCAGTTAATAGAAAGATTGTGCTTGAAGACATACTCGACGTTAGAACAATTTCCTCAAGTAGAGTTGAAGGATGGGGTTTGGACTGTAGCAACTCTTCACCGCATAATTGCTGTCCATAAGAACAAGGCAAAGTTTAAACGCCACAAAACCAAACAAGATGGTAAATCCGAAGTTGAGAAAGTTGATGAGGAAGCTGAAGATGAGAAAGAGGATGAAGAAGTCCCACTAAAATGCAAACGGTAA

Protein sequence

MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR

Homology

[Close]

BLAST of IVF0009538 vs. ExPASy TrEMBL
Match: A0A5D3CJD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00890 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV
Sbjct: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
           ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR
Sbjct: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120

[Close]

BLAST of IVF0009538 vs. ExPASy TrEMBL
Match: A0A5A7TV72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006200 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 114/120 (95.00%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLK   TL+QFPQV
Sbjct: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKACLTLKQFPQV 60

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
           ELKDGVWTV TLH IIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR
Sbjct: 61  ELKDGVWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120

[Close]

BLAST of IVF0009538 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.1e-32
Identity = 75/120 (62.50%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MERI LVYYI + + VN+GE+IS+HII  VKHP G RPFPQLI++LCLK  S L+  PQ+
Sbjct: 11  MERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKACSALDNLPQI 70

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
            +KDG+W+ ATL+RIIA+++NKAK K  K KQDGKSEV++VD++ E+EKE++ VPLK KR
Sbjct: 71  GVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEEDNVPLKRKR 130

[Close]

BLAST of IVF0009538 vs. ExPASy TrEMBL
Match: A0A0A0LAN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.5e-26
Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MER+ LVY I K +LVNIG++IS HIIA VKHP G RPF  LIE+LCL+    LE+ PQV
Sbjct: 48  MERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRACLMLEKLPQV 107

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
           E+KDG+W  +TLHRIIA+HKNKAK K  KTK+  K   E  D++ E+E + + +P K KR
Sbjct: 108 EVKDGIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDDDDVEEEDKKDNIPQKRKR 167

[Close]

BLAST of IVF0009538 vs. ExPASy TrEMBL
Match: A0A5A7VEP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001430 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 70/109 (64.22%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           ME+  LVY I +HLLVNIG++IS+HIIAWVKHP   R F  LIERLCLK   +LEQ P V
Sbjct: 12  MEQSVLVYCIMEHLLVNIGKIISKHIIAWVKHPHEARHFMHLIERLCLKACLSLEQLPYV 71

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEK--VDEEAED 108
           E+KDGVW   TLHRII VHKNK KFK  KTKQDG S   K  V EE  +
Sbjct: 72  EVKDGVWNTTTLHRIIFVHKNKVKFKCLKTKQDGLSATRKGVVQEEVNN 120

[Close]

BLAST of IVF0009538 vs. NCBI nr
Match: TYK11921.1 (hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 238 bits (607), Expect = 1.02e-77
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV
Sbjct: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
           ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR
Sbjct: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120

[Close]

BLAST of IVF0009538 vs. NCBI nr
Match: KAA0046046.1 (hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa])

HSP 1 Score: 225 bits (574), Expect = 5.34e-74
Identity = 114/120 (95.00%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLK   TL+QFPQV
Sbjct: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKACLTLKQFPQV 60

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
           ELKDGVWTV TLH IIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR
Sbjct: 61  ELKDGVWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120

[Close]

BLAST of IVF0009538 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 148 bits (374), Expect = 2.82e-43
Identity = 75/120 (62.50%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MERI LVYYI + + VN+GE+IS+HII  VKHP G RPFPQLI++LCLK  S L+  PQ+
Sbjct: 11  MERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKACSALDNLPQI 70

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
            +KDG+W+ ATL+RIIA+++NKAK K  K KQDGKSEV++VD++ E+EKE++ VPLK KR
Sbjct: 71  GVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEEDNVPLKRKR 130

[Close]

BLAST of IVF0009538 vs. NCBI nr
Match: KAA0064201.1 (hypothetical protein E6C27_scaffold548G001430 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (319), Expect = 3.14e-34
Identity = 66/96 (68.75%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           ME+  LVY I +HLLVNIG++IS+HIIAWVKHP   R F  LIERLCLK   +LEQ P V
Sbjct: 12  MEQSVLVYCIMEHLLVNIGKIISKHIIAWVKHPHEARHFMHLIERLCLKACLSLEQLPYV 71

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKS 96
           E+KDGVW   TLHRII VHKNK KFK  KTKQDG S
Sbjct: 72  EVKDGVWNTTTLHRIIFVHKNKVKFKCLKTKQDGLS 107

[Close]

BLAST of IVF0009538 vs. NCBI nr
Match: KGN57727.1 (hypothetical protein Csa_009739 [Cucumis sativus])

HSP 1 Score: 127 bits (318), Expect = 3.76e-34
Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MERIKLVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQV 60
           MER+ LVY I K +LVNIG++IS HIIA VKHP G RPF  LIE+LCL+    LE+ PQV
Sbjct: 48  MERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRACLMLEKLPQV 107

Query: 61  ELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120
           E+KDG+W  +TLHRIIA+HKNKAK K  KTK+  K   E  D++ E+E + + +P K KR
Sbjct: 108 EVKDGIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDDDDVEEEDKKDNIPQKRKR 167

The following BLAST results are available for this feature:

BLAST of IVF0009538 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009538 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJD1	2.0e-59	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TV72	1.3e-55	95.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UWQ4	2.1e-32	62.50	Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE...	[more]
A0A0A0LAN0	6.5e-26	57.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1	[more]
A0A5A7VEP3	1.1e-25	64.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0009538 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11921.1	1.02e-77	100.00	hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa]	[more]
KAA0046046.1	5.34e-74	95.00	hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa]	[more]
KAA0060282.1	2.82e-43	62.50	drebrin-like [Cucumis melo var. makuwa]	[more]
KAA0064201.1	3.14e-34	68.75	hypothetical protein E6C27_scaffold548G001430 [Cucumis melo var. makuwa]	[more]
KGN57727.1	3.76e-34	57.50	hypothetical protein Csa_009739 [Cucumis sativus]	[more]

BLAST of IVF0009538 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009538.2	IVF0009538.2	mRNA