IVF0009409 (gene) Melon (IVF77) v1

Overview


Name	IVF0009409
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Polynucleotidyl transferase ribonuclease H-like superfamily protein
Location	chr07: 3787242 .. 3790258 (-)
RNA-Seq Expression	IVF0009409
Synteny	IVF0009409

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATAAAAAATTTTAAAACTAAATAAAGTGCAAATTTAAGCCGTTGATAAATAAAAATAAAATAATTTTAGGTAATAGCCCTCGGATTTGCTGCTGCAGAATTCGACCACTCTAACGTCCGTCGTCTTCCCCGGCTCCGGTCGACCGTCGGAGTGTACACCGTACGTCATCCACTCACTTCCGTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCATCCTCTGCTTCCCGTTTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCATGAACCATCTTCTTCAGCTCCCTCTCAATTCCCCGATGTGGCAGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAGGTGCACAATGGTATTTTTCAATTCCGGTTTTAGTTGCAGCAATCGCGTTTTTCGAATGCTTTTATGTTTTCTTTCCTTCCATTTTGTGAAATGATTGAAGATTTTACTTGACTGTGGATGCTAAGTTGTTGGTTTGGTGTTGTACACCACATGTTCGACGATATTCATCACAGAGCTTTTGCTCGTTTTTGCTGCGTGTTAAGCTGTCTAGTAGTTGATTTTTGATTAGGGACTCCATAATTTGAGAATTAGACGGGTAAGGTAATCGACATATCGTTTTAATTCTAGAAGTGGATAATTTGCATCCCATCTGAACACAATAGGAAATATTGGAATTCTAAAAAAGTTTACGAATGTACAACCATTTTTCACTTTTGATCAGGCTCTTGTCTTATGCTGGGTGTTCAGATGGTTTTCATTGGATTTCCCCAGCTGAAATTTCGCAGAACAATTTAGATATTTATTGTCTTATGTTGTGTAGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAACCATATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTCTACATGCTTCTTTATAACGTGCTCATTTTTGCTATTGGTTATGCATCAATTTCTTTTTCCACTTGGCAGATTATATATTTTATGCATCTCTATATTTCCCCGTTACCTGTTTTTCTTCTTTATAGACAATATAATCTCGAAGAGAATATAGAAGGAATTACCTGAATATCCGCACTAAGATATTAGATACTGATGCCTTACTACCCCTTTACCTTACATTTCTGATGGGCATATGAGTAATATAAGTTTGGTTGAGAGATGACATTGATTGGCTTGTTAAGTTTGTAACCCAATCATGTAAAACGATTTAACTTTCAAGAATGTCAACAAGTTCTTTGGGTGATTAAGAACAAGATATTTATATTTTTTCTTTTTTGGTTGCCATGTTTGCTGACCATTGTTTTAAATCCTTCCTCAGGTTTGTTAGGCCATCAAGAATGAGTGAAAAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGGTAGGCTTCTAGTCTTGTGTGGGGAAGGCTTGGTAATGTTTGACATTATTGTGAATTCATTTAGAAGAATTATTGATCAACCGTCGATCAAGGCCCTGATAGACTTTTGGATGTATTTCATAATCTGATTGTATGACGTATTGATGTACATGTCCAATGCTAATTTGGTAGGAAATATTTTTCTGCAGTATGTTCACACCTCCCGTTAATATTCTAGTGCCACTTTCTTTTACTAGCTGATAGTTCCATATTATAATTCACAGTGTCTGGCATGACACAGCCATACTGTACAACGATGTTATTCAACAATTTGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACGGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGGCAAGCCTCCTTTTCTTGATCTACTTTTATGTTCCTTCCTAAATTGTTCATTTCTTCATATTGTTAATGTGCTATGTCTATCAGTAGTTTGCCAGCAACCACTAGGTCTTTTCACCCTTTTATAACGTTGAGGTTTGATTATCTAATGATTCATTTTCTCTTTTACTTCTACCAGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCCGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGTACAACAATCCTGTCAAAATAGCAGTTCGTAGCATCTTGAGTGGCTTTATTGTTCTGTTGTCAAGAGAGACATTATTTTACTTTTAGGAGTCAGAATTACGAAATCAATCTGCTGCTGATCATTTCACTTTTCTTCAACTGCTTGGATAGATTATATCACGCATTGCAAAACACAATACATTGGTTTAGAATTATCAAAACAGAGTTCAACATTCATTATTCCACACGGGAAATACTTGAATGAAAATGATGCTCTCTGTTAGACTTACATATAACATAATAATGTAATTGTTTGTTTGGTTTCTCTGAGATCGGATCTTACACGACCAATCATTGATGAAGTTGTTTACTTTTGGATGGTAATTGGTAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGTGCTTGGTGGGAAGCCATCATCTTGGTATAGATGATACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCACGAAGGAATCCTAAATCTCCTCAACAAGTTAAGTTTCTTTTTGAGAACCGTATTTAGTGATGCCTATCTTCAGCAAGTTATCTTTCATATTTGTCTGGATGATCTATGGAATGGATAAATCTTAAACTTGATCTCATGAATTGTAGATGTATCTGTCAATCAGTTGTGATGTGTTTCAAGTGTTGAAATTTGACC

mRNA sequence

CAAAATAAAAAATTTTAAAACTAAATAAAGTGCAAATTTAAGCCGTTGATAAATAAAAATAAAATAATTTTAGGTAATAGCCCTCGGATTTGCTGCTGCAGAATTCGACCACTCTAACGTCCGTCGTCTTCCCCGGCTCCGGTCGACCGTCGGAGTGTACACCGTACGTCATCCACTCACTTCCGTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCATCCTCTGCTTCCCGTTTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCATGAACCATCTTCTTCAGCTCCCTCTCAATTCCCCGATGTGGCAGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAGGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAACCATATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAAAAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAACGATGTTATTCAACAATTTGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACGGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCCGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGTGCTTGGTGGGAAGCCATCATCTTGGTATAGATGATACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCACGAAGGAATCCTAAATCTCCTCAACAAGTTAAGTTTCTTTTTGAGAACCGTATTTAGTGATGCCTATCTTCAGCAAGTTATCTTTCATATTTGTCTGGATGATCTATGGAATGGATAAATCTTAAACTTGATCTCATGAATTGTAGATGTATCTGTCAATCAGTTGTGATGTGTTTCAAGTGTTGAAATTTGACC

Coding sequence (CDS)

ATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCATCCTCTGCTTCCCGTTTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCATGAACCATCTTCTTCAGCTCCCTCTCAATTCCCCGATGTGGCAGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAGGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAACCATATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAAAAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAACGATGTTATTCAACAATTTGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACGGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCCGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGTGCTTGGTGGGAAGCCATCATCTTGGTATAGATGATACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCACGAAGGAATCCTAAATCTCCTCAACAAGTTAAGTTTCTTTTTGAGAACCGTATTTAG

Protein sequence

MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWHDTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQITARRNPKSPQQVKFLFENRI

Homology

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BLAST of IVF0009409 vs. ExPASy Swiss-Prot
Match: Q8W566 (Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana OX=3702 GN=At3g15140 PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.0e-102
Identity = 182/329 (55.32%), Postives = 240/329 (72.95%), Query Frame = 0


Query: 4   RASLLKLSSF----YSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQ 63
           R SL ++S F    +S P   L        +C+S  +       S    S   SSS+PS 
Sbjct: 9   RVSLSRISPFRDTRFSYPA-TLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPST 68

Query: 64  FP--DVADN-RWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVD 123
           F   + ++N RWRP CLY+THG+CT MDDP H++ FNHD S+EL+V  A     ++Q+ +
Sbjct: 69  FSLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFN 128

Query: 124 YFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVD 183
           +FLV+DLEGKVEI+EFP+++V+AKTM V   FHRFVRP++MSE+ IN+YIEGKYG+ GVD
Sbjct: 129 FFLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVD 188

Query: 184 RVWHDTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSK 243
           RVWHDTAI +  V+++FE WL +H LW K+    L+ AAFVTCGNWDIKT++P QC VS 
Sbjct: 189 RVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSN 248

Query: 244 MKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRM 303
           + LP YFMEWIN+KDVYLNFYG++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM
Sbjct: 249 INLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRM 308

Query: 304 VGDGAHLQITARRNPKSPQQVKFLFENRI 326
           + +GA L++TARR+  + + V+FLF+NRI
Sbjct: 309 LSEGAVLKLTARRSKSNMRNVEFLFKNRI 336

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BLAST of IVF0009409 vs. ExPASy Swiss-Prot
Match: Q5FVR4 (3'-5' exoribonuclease 1 OS=Rattus norvegicus OX=10116 GN=Eri1 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.0e-23
Identity = 64/205 (31.22%), Postives = 107/205 (52.20%), Query Frame = 0


Query: 116 DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEY 175
           DY  ++D E             EIIEFPV+L+N  ++ +   F ++VRP   S+  ++E+
Sbjct: 124 DYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQ--LSEF 183

Query: 176 IEGKYGKFGVDRVWHDTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIK 235
                G  G+ +   D A  +  V+++  +W+   +L  K +  +L      T G+WD+ 
Sbjct: 184 C---IGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCIL------TDGSWDMS 243

Query: 236 TQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMCLVGSHHLGI 295
             +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+
Sbjct: 244 KFLNIQCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGL 303

Query: 296 DDTKNIVRVLQRMVGDGAHLQITAR 309
           DD+KNI R+  RM+ DG  L+I  +
Sbjct: 304 DDSKNIARIAVRMLQDGCELRINEK 317

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BLAST of IVF0009409 vs. ExPASy Swiss-Prot
Match: Q7TMF2 (3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-22
Identity = 64/205 (31.22%), Postives = 106/205 (51.71%), Query Frame = 0


Query: 116 DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEY 175
           DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      +++E+
Sbjct: 124 DYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPE--VNAQLSEF 183

Query: 176 IEGKYGKFGVDRVWHDTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIK 235
                G  G+ +   D A  +  V+++  +W+   +L  K +  +L      T G+WD+ 
Sbjct: 184 C---IGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCIL------TDGSWDMS 243

Query: 236 TQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMCLVGSHHLGI 295
             +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+
Sbjct: 244 KFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGL 303

Query: 296 DDTKNIVRVLQRMVGDGAHLQITAR 309
           DD+KNI R+  RM+ DG  L+I  +
Sbjct: 304 DDSKNIARIAVRMLQDGCELRINEK 317

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BLAST of IVF0009409 vs. ExPASy Swiss-Prot
Match: Q8IV48 (3'-5' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=ERI1 PE=1 SV=3)

HSP 1 Score: 107.8 bits (268), Expect = 2.3e-22
Identity = 63/205 (30.73%), Postives = 105/205 (51.22%), Query Frame = 0


Query: 116 DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEY 175
           DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      +++++
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE--INTQLSDF 187

Query: 176 IEGKYGKFGVDRVWHDTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIK 235
                   G+ +   D A  +  V+++  DW+   +L  K +  +L      T G+WD+ 
Sbjct: 188 C---ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLL------TDGSWDMS 247

Query: 236 TQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMCLVGSHHLGI 295
             +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+
Sbjct: 248 KFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGL 307

Query: 296 DDTKNIVRVLQRMVGDGAHLQITAR 309
           DD+KNI R+  RM+ DG  L+I  +
Sbjct: 308 DDSKNIARIAVRMLQDGCELRINEK 321

[Close]

BLAST of IVF0009409 vs. ExPASy Swiss-Prot
Match: Q8C460 (ERI1 exoribonuclease 3 OS=Mus musculus OX=10090 GN=Eri3 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.7e-22
Identity = 62/208 (29.81%), Postives = 104/208 (50.00%), Query Frame = 0


Query: 113 QDVDYFLVLDLEGKV--------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINE 172
           Q   YFLVLD E           EIIEFP++ +N +TM +   FH +V+P  +   ++  
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 200

Query: 173 YIEGKYGKFGVDRVWHDTAILYNDVIQQFEDWLVQHQLWRKERGGVLD---RAAFVTCGN 232
           +        G+ +   D       V+++ ++W+ +         G+LD   ++ FVTCG+
Sbjct: 201 FCT---ELTGIIQAMVDGQPSLQQVLERVDEWMAKE--------GLLDPNVKSIFVTCGD 260

Query: 233 WDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYG-KKATGMATMMRQLEMCLVGSHH 292
           WD+K  +P QC+   + + DYF +WIN+K  Y    G     G+  M + L +  +G  H
Sbjct: 261 WDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPH 320

Query: 293 LGIDDTKNIVRVLQRMVGDGAHLQITAR 309
            GIDD KNI  +++ +   G   + T++
Sbjct: 321 SGIDDCKNIANIMKTLAYRGFIFKQTSK 335

[Close]

BLAST of IVF0009409 vs. ExPASy TrEMBL
Match: A0A1S3CJV9 (uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501789 PE=4 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 7.0e-192
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60
           MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF
Sbjct: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120
           PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240
           DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP
Sbjct: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG
Sbjct: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQITARRNPKSPQQVKFLFENRI 326
           AHLQITARRNPKSPQQVKFLFENRI
Sbjct: 301 AHLQITARRNPKSPQQVKFLFENRI 325

[Close]

BLAST of IVF0009409 vs. ExPASy TrEMBL
Match: A0A0A0L4N2 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628930 PE=4 SV=1)

HSP 1 Score: 651.0 bits (1678), Expect = 2.7e-183
Identity = 311/325 (95.69%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60
           MFLRASLLK SSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSA P+SHEPSSSA S+F
Sbjct: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120
           PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQD DYFLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240
           DTAILY DVIQQFEDWLVQHQLWRKE GGVLDRAAFVTCGNWDIKTQVPHQC+VSKMKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGDG
Sbjct: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQITARRNPKSPQQVKFLFENRI 326
           AHLQ+TARRNPKSPQ VKFLFENRI
Sbjct: 301 AHLQVTARRNPKSPQHVKFLFENRI 325

[Close]

BLAST of IVF0009409 vs. ExPASy TrEMBL
Match: A0A6J1F6E0 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita moschata OX=3662 GN=LOC111442549 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 3.9e-166
Identity = 281/325 (86.46%), Postives = 300/325 (92.31%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60
           MF+RA LLK+SSFYSIPCH L+P+ LSS+ICSSPRTP SIRCHS+LP +H+PSSSAPS+ 
Sbjct: 1   MFVRAPLLKVSSFYSIPCHSLVPLYLSSAICSSPRTPLSIRCHSSLPTAHDPSSSAPSES 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD+++FLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240
           DTAILY DVIQQFEDWLV+HQLWRKE GGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGM TMMRQLE+ LVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

Query: 301 AHLQITARRNPKSPQQVKFLFENRI 326
           AHLQITARRNP SPQ VKF FENRI
Sbjct: 301 AHLQITARRNPNSPQHVKFRFENRI 325

[Close]

BLAST of IVF0009409 vs. ExPASy TrEMBL
Match: A0A6J1IG11 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita maxima OX=3661 GN=LOC111476907 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 6.6e-166
Identity = 280/325 (86.15%), Postives = 301/325 (92.62%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60
           MF+RA LLK+SSFYSIPCH L+P+SLSS+ICSSPRTP +IRCHS+LP +HEPSSSAPS+ 
Sbjct: 1   MFVRAPLLKVSSFYSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD+++FLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240
           DTAILY DVIQQFEDWLV+HQ+WRK+ GGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGMA MMRQLE+ LVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

Query: 301 AHLQITARRNPKSPQQVKFLFENRI 326
           AHLQITARRNP SPQ VKF FENRI
Sbjct: 301 AHLQITARRNPNSPQHVKFHFENRI 325

[Close]

BLAST of IVF0009409 vs. ExPASy TrEMBL
Match: A0A6J1CCI3 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Momordica charantia OX=3673 GN=LOC111010332 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.1e-156
Identity = 270/328 (82.32%), Postives = 297/328 (90.55%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSA-PSQ 60
           MFLRA LLK+SSFYSIPC+PL+P+SL SS+ SS RTPF IRCH++LP +HEPSSSA P  
Sbjct: 1   MFLRAPLLKVSSFYSIPCYPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPH 60

Query: 61  FPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRT--QDVDY 120
            P+ ADNRWRP CLY+T G+CTMMDDPLH+KKFNHDISR LQV+ ARSNH RT  QD+D+
Sbjct: 61  SPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRVLQVN-ARSNHTRTQSQDIDF 120

Query: 121 FLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDR 180
           FLVLDLEGKVEIIEFPVILV+AKT+GVTGFFHRFVRPS MSE+RINEYIEGKYGKFGVDR
Sbjct: 121 FLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSNMSERRINEYIEGKYGKFGVDR 180

Query: 181 VWHDTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKM 240
           VWHDTAI Y +VIQQFEDWLV+HQLW+KE GG LDRAAFVTCGNWDIKTQVPHQC+VS +
Sbjct: 181 VWHDTAISYKEVIQQFEDWLVEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNI 240

Query: 241 KLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMV 300
           +LP+YFMEWINIKDVYLNFY KKATGM TMMRQLE+ L+GSHHLGIDDTKNIVRVLQRMV
Sbjct: 241 ELPNYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV 300

Query: 301 GDGAHLQITARRNPKSPQQVKFLFENRI 326
            DGA LQITARRNP SPQ VKFLFENRI
Sbjct: 301 ADGARLQITARRNPNSPQHVKFLFENRI 327

[Close]

BLAST of IVF0009409 vs. NCBI nr
Match: XP_008463707.1 (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis melo])

HSP 1 Score: 671 bits (1732), Expect = 9.48e-244
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60
           MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF
Sbjct: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120
           PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240
           DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP
Sbjct: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG
Sbjct: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQITARRNPKSPQQVKFLFENRI 325
           AHLQITARRNPKSPQQVKFLFENRI
Sbjct: 301 AHLQITARRNPKSPQQVKFLFENRI 325

[Close]

BLAST of IVF0009409 vs. NCBI nr
Match: XP_004146041.1 (uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus] >KGN55096.1 hypothetical protein Csa_012433 [Cucumis sativus])

HSP 1 Score: 643 bits (1658), Expect = 1.81e-232
Identity = 311/325 (95.69%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60
           MFLRASLLK SSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSA P+SHEPSSSA S+F
Sbjct: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120
           PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQD DYFLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240
           DTAILY DVIQQFEDWLVQHQLWRKE GGVLDRAAFVTCGNWDIKTQVPHQC+VSKMKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGDG
Sbjct: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQITARRNPKSPQQVKFLFENRI 325
           AHLQ+TARRNPKSPQ VKFLFENRI
Sbjct: 301 AHLQVTARRNPKSPQHVKFLFENRI 325

[Close]

BLAST of IVF0009409 vs. NCBI nr
Match: XP_038896828.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Benincasa hispida])

HSP 1 Score: 609 bits (1570), Expect = 4.53e-219
Identity = 295/325 (90.77%), Postives = 307/325 (94.46%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60
           MFLRA LLKLS  YSIPCH L+P+SLSSSICSS RTPF +RCHSALPISHEPSSS PS+F
Sbjct: 1   MFLRAPLLKLSPIYSIPCHSLVPLSLSSSICSS-RTPFDLRCHSALPISHEPSSSPPSEF 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120
           PDVADNRWRPTCLYFT G+CTMMDDPLHIKKFNHDIS ELQVDVARSNHMR QDVD+FLV
Sbjct: 61  PDVADNRWRPTCLYFTQGKCTMMDDPLHIKKFNHDISMELQVDVARSNHMRIQDVDFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240
           DTAIL+ DVIQ+FEDWLVQHQLWRKE GGVLDRAAFVTCGNWDIKTQ PHQC+VSKMKLP
Sbjct: 181 DTAILFKDVIQEFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQAPHQCSVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGMATMMRQLE+ LVGSHHLGIDDTKNIVRV+QRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYNKKATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVMQRMVADG 300

Query: 301 AHLQITARRNPKSPQQVKFLFENRI 325
           AHLQ TARRNPKSPQ VKFLFENRI
Sbjct: 301 AHLQTTARRNPKSPQHVKFLFENRI 324

[Close]

BLAST of IVF0009409 vs. NCBI nr
Match: XP_023535410.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590 bits (1520), Expect = 1.96e-211
Identity = 281/325 (86.46%), Postives = 303/325 (93.23%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60
           MF+RA LLK+SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+LP +HEPSSSAPS+ 
Sbjct: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLH+KKFNHDISRELQVDVA S HMRTQD+++FLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240
           DTAILY DVIQQFEDWLV+HQLWRKE GGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGMATMMRQLE+ LVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

Query: 301 AHLQITARRNPKSPQQVKFLFENRI 325
           AHLQITARRNP SPQQVKF FENRI
Sbjct: 301 AHLQITARRNPNSPQQVKFRFENRI 325

[Close]

BLAST of IVF0009409 vs. NCBI nr
Match: XP_022935722.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita moschata])

HSP 1 Score: 586 bits (1510), Expect = 6.55e-210
Identity = 281/325 (86.46%), Postives = 300/325 (92.31%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60
           MF+RA LLK+SSFYSIPCH L+P+ LSS+ICSSPRTP SIRCHS+LP +H+PSSSAPS+ 
Sbjct: 1   MFVRAPLLKVSSFYSIPCHSLVPLYLSSAICSSPRTPLSIRCHSSLPTAHDPSSSAPSES 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD+++FLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240
           DTAILY DVIQQFEDWLV+HQLWRKE GGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGM TMMRQLE+ LVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

Query: 301 AHLQITARRNPKSPQQVKFLFENRI 325
           AHLQITARRNP SPQ VKF FENRI
Sbjct: 301 AHLQITARRNPNSPQHVKFRFENRI 325

[Close]

BLAST of IVF0009409 vs. TAIR 10
Match: AT3G15140.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 374.8 bits (961), Expect = 7.1e-104
Identity = 182/329 (55.32%), Postives = 240/329 (72.95%), Query Frame = 0


Query: 4   RASLLKLSSF----YSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQ 63
           R SL ++S F    +S P   L        +C+S  +       S    S   SSS+PS 
Sbjct: 9   RVSLSRISPFRDTRFSYPA-TLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPST 68

Query: 64  FP--DVADN-RWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVD 123
           F   + ++N RWRP CLY+THG+CT MDDP H++ FNHD S+EL+V  A     ++Q+ +
Sbjct: 69  FSLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFN 128

Query: 124 YFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVD 183
           +FLV+DLEGKVEI+EFP+++V+AKTM V   FHRFVRP++MSE+ IN+YIEGKYG+ GVD
Sbjct: 129 FFLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVD 188

Query: 184 RVWHDTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSK 243
           RVWHDTAI +  V+++FE WL +H LW K+    L+ AAFVTCGNWDIKT++P QC VS 
Sbjct: 189 RVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSN 248

Query: 244 MKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRM 303
           + LP YFMEWIN+KDVYLNFYG++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM
Sbjct: 249 INLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRM 308

Query: 304 VGDGAHLQITARRNPKSPQQVKFLFENRI 326
           + +GA L++TARR+  + + V+FLF+NRI
Sbjct: 309 LSEGAVLKLTARRSKSNMRNVEFLFKNRI 336

The following BLAST results are available for this feature:

BLAST of IVF0009409 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W566	1.0e-102	55.32	Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis t...	[more]
Q5FVR4	6.0e-23	31.22	3'-5' exoribonuclease 1 OS=Rattus norvegicus OX=10116 GN=Eri1 PE=2 SV=1	[more]
Q7TMF2	1.0e-22	31.22	3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2	[more]
Q8IV48	2.3e-22	30.73	3'-5' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=ERI1 PE=1 SV=3	[more]
Q8C460	8.7e-22	29.81	ERI1 exoribonuclease 3 OS=Mus musculus OX=10090 GN=Eri3 PE=1 SV=1	[more]

BLAST of IVF0009409 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJV9	7.0e-192	100.00	uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 OS=Cu...	[more]
A0A0A0L4N2	2.7e-183	95.69	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628930...	[more]
A0A6J1F6E0	3.9e-166	86.46	uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita mos...	[more]
A0A6J1IG11	6.6e-166	86.15	uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita max...	[more]
A0A6J1CCI3	2.1e-156	82.32	uncharacterized exonuclease domain-containing protein At3g15140 OS=Momordica cha...	[more]

BLAST of IVF0009409 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463707.1	9.48e-244	100.00	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo...	[more]
XP_004146041.1	1.81e-232	95.69	uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucu...	[more]
XP_038896828.1	4.53e-219	90.77	uncharacterized exonuclease domain-containing protein At3g15140 [Benincasa hispi...	[more]
XP_023535410.1	1.96e-211	86.46	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita pepo ...	[more]
XP_022935722.1	6.55e-210	86.46	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita mosch...	[more]

BLAST of IVF0009409 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15140.1	7.1e-104	55.32	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 105..323 e-value: 1.8E-56 score: 193.0
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 122..293 e-value: 1.2E-8 score: 35.6
None	No IPR available	PANTHER	PTHR23044:SF68	OS06G0353400 PROTEIN	coord: 23..325
None	No IPR available	PANTHER	PTHR23044	3'-5' EXONUCLEASE ERI1-RELATED	coord: 23..325
None	No IPR available	CDD	cd06133	ERI-1_3'hExo_like	coord: 118..296 e-value: 6.37075E-49 score: 159.693
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 114..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009409.1	IVF0009409.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity