IVF0009405 (gene) Melon (IVF77) v1

Overview


Name	IVF0009405
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Signaling peptide TAXIMIN 2
Location	chr06: 2464539 .. 2465153 (-)
RNA-Seq Expression	IVF0009405
Synteny	IVF0009405

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATGTTGCAGGCCATTAGGGTTCTTGATAGGCCTTCCTTTTTCCTTTCTTTCCTTGGTTCTCTCCTTCATTGGTGCTCTTCTTTGGATCTTTTGGTGAGTTTCTTCTCTTTACCCTCTTCCTTTTGGAAAATAAAATCTCTAACTTTCTCAAAATGCACAAGTACGGTACAATCAATTTTTATTTGCATGCATCGTGTGCTTTTGATAATTGGATATATGTATATATATATATAGGTCCCTTTTGAGCTGCATTTGCCCTTGCTGTGTATGTTTTGCTGTACTTTCAGATTTCTCAATAAGCCTTATGAAGCTTCCCATCAATGTTATGGATTGGTTCATTGACTTAATTCCTTGTTAGGGTTTTTAGGGAAATTGAAAATTCCAGTTTTATTCATGGGAATTAAAATTGGTTAATATGGGCTTTGTGTATTCATTTTGTCAGAACAGCAATCCTCTTTTATGCACATATATAGATATAGTGATAGAGATGTAGCTTTGTTATGGGTTAAACTTATGTAAATTAGGTTAGATGAGATTTGTTTGTGTTTATCCAAAGTATGTATGTATGTATGTACTTACACACACACACACACATATATATATATTTATC

mRNA sequence

ATGGCATGTTGCAGGCCATTAGGGTTCTTGATAGGCCTTCCTTTTTCCTTTCTTTCCTTGGTTCTCTCCTTCATTGGTGCTCTTCTTTGGATCTTTTGGTCCCTTTTGAGCTGCATTTGCCCTTGCTGTGTATGTTTTGCTGTACTTTCAGATTTCTCAATAAGCCTTATGAAGCTTCCCATCAATGTTATGGATTGGTTCATTGACTTAATTCCTTGTTAGGGTTTTTAGGGAAATTGAAAATTCCAGTTTTATTCATGGGAATTAAAATTGGTTAATATGGGCTTTGTGTATTCATTTTGTCAGAACAGCAATCCTCTTTTATGCACATATATAGATATAGTGATAGAGATGTAGCTTTGTTATGGGTTAAACTTATGTAAATTAGGTTAGATGAGATTTGTTTGTGTTTATCCAAAGTATGTATGTATGTATGTACTTACACACACACACACACATATATATATATTTATC

Coding sequence (CDS)

ATGGCATGTTGCAGGCCATTAGGGTTCTTGATAGGCCTTCCTTTTTCCTTTCTTTCCTTGGTTCTCTCCTTCATTGGTGCTCTTCTTTGGATCTTTTGGTCCCTTTTGAGCTGCATTTGCCCTTGCTGTGTATGTTTTGCTGTACTTTCAGATTTCTCAATAAGCCTTATGAAGCTTCCCATCAATGTTATGGATTGGTTCATTGACTTAATTCCTTGTTAG

Protein sequence

MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINVMDWFIDLIPC

Homology

[Close]

BLAST of IVF0009405 vs. ExPASy Swiss-Prot
Match: O82275 (Signaling peptide TAXIMIN 1 OS=Arabidopsis thaliana OX=3702 GN=TAX1 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 6.9e-20
Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 4  CRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINV 63
          CRPLGFL+GLPF+FLSL+LS IG ++WI   LLSCICPCC+C  VL + +I L+K PI+V
Sbjct: 6  CRPLGFLLGLPFAFLSLLLSIIGVIIWIVGLLLSCICPCCLCVTVLVEIAIGLIKAPIHV 65

Query: 64 MDWFIDLIPC 74
          M+WF+  IPC
Sbjct: 66 MEWFMSKIPC 75

[Close]

BLAST of IVF0009405 vs. ExPASy Swiss-Prot
Match: Q1G309 (Signaling peptide TAXIMIN 2 OS=Arabidopsis thaliana OX=3702 GN=TAX2 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.0e-20
Identity = 43/73 (58.90%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 1  MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLP 60
          M  CRPLGFLIGLPF+ ++LVL+ +GA++WI  ++LSC+CPCC CFA L++F++ L+KLP
Sbjct: 1  MGDCRPLGFLIGLPFALVALVLALVGAVIWIIGTVLSCLCPCCFCFAALANFAVDLIKLP 60

Query: 61 INVMDWFIDLIPC 74
          I V+ WF   IPC
Sbjct: 61 IKVLRWFTHSIPC 73

[Close]

BLAST of IVF0009405 vs. ExPASy TrEMBL
Match: A0A1S3C2P5 (uncharacterized protein LOC103496213 OS=Cucumis melo OX=3656 GN=LOC103496213 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.0e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 5  RPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINVM 64
          +PLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINVM
Sbjct: 4  KPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINVM 63

Query: 65 DWFIDLIPC 74
          DWFIDLIPC
Sbjct: 64 DWFIDLIPC 72

[Close]

BLAST of IVF0009405 vs. ExPASy TrEMBL
Match: A0A6J1JIC5 (uncharacterized protein LOC111486053 OS=Cucurbita maxima OX=3661 GN=LOC111486053 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20
Identity = 54/72 (75.00%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLP 60
          MACCRPLGFLIGLPF+ LSL LS IGALL+IF S+LSCICPCCVC A+L  FSI+L+KLP
Sbjct: 1  MACCRPLGFLIGLPFALLSLSLSCIGALLFIFLSILSCICPCCVCVAILISFSINLVKLP 60

Query: 61 INVMDWFIDLIP 73
          I+V+ WF D+IP
Sbjct: 61 IDVIIWFTDMIP 72

[Close]

BLAST of IVF0009405 vs. ExPASy TrEMBL
Match: A0A6N2MDW9 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS358856 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20
Identity = 47/73 (64.38%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLP 60
          M  CRPLGFLIGLPF+ ++LVLS +GA++W+  ++LSC+CPCC+CFA L++F++SL+KLP
Sbjct: 1  MGDCRPLGFLIGLPFALVALVLSLVGAVVWVIGTVLSCLCPCCICFAGLANFAVSLVKLP 60

Query: 61 INVMDWFIDLIPC 74
          + VM WFIDLIPC
Sbjct: 61 VKVMKWFIDLIPC 73

[Close]

BLAST of IVF0009405 vs. ExPASy TrEMBL
Match: A0A5N5KVX7 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_017675 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20
Identity = 47/73 (64.38%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLP 60
          M  CRPLGFLIGLPF+ ++LVLS +GA++W+  ++LSC+CPCC+CFA L++F++SL+KLP
Sbjct: 1  MGDCRPLGFLIGLPFALVALVLSLVGAVVWVIGTVLSCLCPCCICFAGLANFAVSLVKLP 60

Query: 61 INVMDWFIDLIPC 74
          + VM WFIDLIPC
Sbjct: 61 VKVMKWFIDLIPC 73

[Close]

BLAST of IVF0009405 vs. ExPASy TrEMBL
Match: B9HZQ4 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G114600 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.2e-20
Identity = 47/73 (64.38%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLP 60
          M  C+PLGFLIGLPF+ ++LVLS IGA++W+  ++LSC+CPCC+CFA L++F++SL+KLP
Sbjct: 1  MGDCKPLGFLIGLPFALVALVLSLIGAVIWVIGTVLSCLCPCCICFAGLANFAVSLVKLP 60

Query: 61 INVMDWFIDLIPC 74
          + VM WFIDLIPC
Sbjct: 61 VKVMRWFIDLIPC 73

[Close]

BLAST of IVF0009405 vs. NCBI nr
Match: XP_008456209.1 (PREDICTED: uncharacterized protein LOC103496213 [Cucumis melo])

HSP 1 Score: 139 bits (351), Expect = 1.83e-41
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 5  RPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINVM 64
          +PLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINVM
Sbjct: 4  KPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINVM 63

Query: 65 DWFIDLIPC 73
          DWFIDLIPC
Sbjct: 64 DWFIDLIPC 72

[Close]

BLAST of IVF0009405 vs. NCBI nr
Match: XP_004146276.1 (signaling peptide TAXIMIN 1-like [Cucumis sativus])

HSP 1 Score: 139 bits (349), Expect = 3.79e-41
Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLP 60
          MACCRPLGFLIGLPF+ LSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSD SISL+KLP
Sbjct: 1  MACCRPLGFLIGLPFAILSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDLSISLLKLP 60

Query: 61 INVMDWFIDLIPC 73
          I+VMDWF+ LIPC
Sbjct: 61 IDVMDWFVSLIPC 73

[Close]

BLAST of IVF0009405 vs. NCBI nr
Match: XP_022845435.1 (uncharacterized protein LOC111368447 [Olea europaea var. sylvestris])

HSP 1 Score: 109 bits (272), Expect = 2.25e-29
Identity = 49/70 (70.00%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 4  CRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINV 63
          CRPLGFLIGLPF+FLSL+LS +G L+W+  S LSCICPCC+C A +++FS+SL+K+PINV
Sbjct: 6  CRPLGFLIGLPFAFLSLILSLVGLLVWVIGSFLSCICPCCMCCAGIANFSVSLVKMPINV 65

Query: 64 MDWFIDLIPC 73
          + WFIDLIPC
Sbjct: 66 IRWFIDLIPC 75

[Close]

BLAST of IVF0009405 vs. NCBI nr
Match: XP_022988826.1 (uncharacterized protein LOC111486053 [Cucurbita maxima])

HSP 1 Score: 108 bits (270), Expect = 4.31e-29
Identity = 54/72 (75.00%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLP 60
          MACCRPLGFLIGLPF+ LSL LS IGALL+IF S+LSCICPCCVC A+L  FSI+L+KLP
Sbjct: 1  MACCRPLGFLIGLPFALLSLSLSCIGALLFIFLSILSCICPCCVCVAILISFSINLVKLP 60

Query: 61 INVMDWFIDLIP 72
          I+V+ WF D+IP
Sbjct: 61 IDVIIWFTDMIP 72

[Close]

BLAST of IVF0009405 vs. NCBI nr
Match: KAB5534589.1 (hypothetical protein DKX38_017675 [Salix brachista] >KAG5235431.1 signaling peptide TAXIMIN [Salix suchowensis])

HSP 1 Score: 108 bits (269), Expect = 6.12e-29
Identity = 47/73 (64.38%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLP 60
          M  CRPLGFLIGLPF+ ++LVLS +GA++W+  ++LSC+CPCC+CFA L++F++SL+KLP
Sbjct: 1  MGDCRPLGFLIGLPFALVALVLSLVGAVVWVIGTVLSCLCPCCICFAGLANFAVSLVKLP 60

Query: 61 INVMDWFIDLIPC 73
          + VM WFIDLIPC
Sbjct: 61 VKVMKWFIDLIPC 73

[Close]

BLAST of IVF0009405 vs. TAIR 10
Match: AT2G31090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.4 bits (241), Expect = 4.9e-21
Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 4  CRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLPINV 63
          CRPLGFL+GLPF+FLSL+LS IG ++WI   LLSCICPCC+C  VL + +I L+K PI+V
Sbjct: 6  CRPLGFLLGLPFAFLSLLLSIIGVIIWIVGLLLSCICPCCLCVTVLVEIAIGLIKAPIHV 65

Query: 64 MDWFIDLIPC 74
          M+WF+  IPC
Sbjct: 66 MEWFMSKIPC 75

[Close]

BLAST of IVF0009405 vs. TAIR 10
Match: AT2G20562.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31090.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 6.4e-21
Identity = 43/73 (58.90%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 1  MACCRPLGFLIGLPFSFLSLVLSFIGALLWIFWSLLSCICPCCVCFAVLSDFSISLMKLP 60
          M  CRPLGFLIGLPF+ ++LVL+ +GA++WI  ++LSC+CPCC CFA L++F++ L+KLP
Sbjct: 1  MGDCRPLGFLIGLPFALVALVLALVGAVIWIIGTVLSCLCPCCFCFAALANFAVDLIKLP 60

Query: 61 INVMDWFIDLIPC 74
          I V+ WF   IPC
Sbjct: 61 IKVLRWFTHSIPC 73

The following BLAST results are available for this feature:

BLAST of IVF0009405 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82275	6.9e-20	64.29	Signaling peptide TAXIMIN 1 OS=Arabidopsis thaliana OX=3702 GN=TAX1 PE=2 SV=2	[more]
Q1G309	9.0e-20	58.90	Signaling peptide TAXIMIN 2 OS=Arabidopsis thaliana OX=3702 GN=TAX2 PE=2 SV=1	[more]

BLAST of IVF0009405 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C2P5	1.0e-29	98.55	uncharacterized protein LOC103496213 OS=Cucumis melo OX=3656 GN=LOC103496213 PE=...	[more]
A0A6J1JIC5	1.9e-20	75.00	uncharacterized protein LOC111486053 OS=Cucurbita maxima OX=3661 GN=LOC111486053...	[more]
A0A6N2MDW9	2.5e-20	64.38	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS358856 PE=4 SV=...	[more]
A0A5N5KVX7	2.5e-20	64.38	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_017675 PE=4 SV=1	[more]
B9HZQ4	4.2e-20	64.38	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G114600 PE=4 ...	[more]

BLAST of IVF0009405 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456209.1	1.83e-41	98.55	PREDICTED: uncharacterized protein LOC103496213 [Cucumis melo]	[more]
XP_004146276.1	3.79e-41	90.41	signaling peptide TAXIMIN 1-like [Cucumis sativus]	[more]
XP_022845435.1	2.25e-29	70.00	uncharacterized protein LOC111368447 [Olea europaea var. sylvestris]	[more]
XP_022988826.1	4.31e-29	75.00	uncharacterized protein LOC111486053 [Cucurbita maxima]	[more]
KAB5534589.1	6.12e-29	64.38	hypothetical protein DKX38_017675 [Salix brachista] >KAG5235431.1 signaling pept...	[more]

BLAST of IVF0009405 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31090.1	4.9e-21	64.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20562.1	6.4e-21	58.90	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33834:SF10	SUBFAMILY NOT NAMED	coord: 1..73
None	No IPR available	PANTHER	PTHR33834	SIGNALING PEPTIDE TAXIMIN 2	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009405.2	IVF0009405.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane