IVF0009281 (gene) Melon (IVF77) v1

Overview


Name	IVF0009281
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein kinase domain-containing protein
Location	chr09: 3091517 .. 3091933 (-)
RNA-Seq Expression	IVF0009281
Synteny	IVF0009281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCTACCTTTTGTCTAACCTCTATCGTCAGTCTAAGGAAAGGTTCCTTCCCTTCTCAAATCTAAGGAAAAGTTCCTTCCCTTACGACTGCAGCCCTACAATATATTTCTACTTTCATTTCGCAGAGATTGAGAACTTAAGTTCTGGAACGGTTCAAGAAATAAGTATTGTGCTGAATGACATCTACTCCATTGCACCATCAATAATTCTCCAGTATCTCGTACCACGAACCATCACAACTTCCGCTGGTATCCCTGTTAATCTCAATGAAGAGAATTACTTGCGGATTTCTGCTGCTTTGGATTCGAAACTTCCTCCCATTATCAATGGGTTTGAGGTTTTTTACTTAGCAAACTCCGCCCAAGTACAAAAGGTGTGGGAAGTCAAGGTTTCTAGCATTTCAAAAGGGGCATAG

mRNA sequence

ATGACCTACCTTTTGTCTAACCTCTATCGTCAGTCTAAGGAAAGGTTCCTTCCCTTCTCAAATCTAAGGAAAAGTTCCTTCCCTTACGACTGCAGCCCTACAATATATTTCTACTTTCATTTCGCAGAGATTGAGAACTTAAGTTCTGGAACGGTTCAAGAAATAAGTATTGTGCTGAATGACATCTACTCCATTGCACCATCAATAATTCTCCAGTATCTCGTACCACGAACCATCACAACTTCCGCTGGTATCCCTGTTAATCTCAATGAAGAGAATTACTTGCGGATTTCTGCTGCTTTGGATTCGAAACTTCCTCCCATTATCAATGGGTTTGAGGTTTTTTACTTAGCAAACTCCGCCCAAGTACAAAAGGTGTGGGAAGTCAAGGTTTCTAGCATTTCAAAAGGGGCATAG

Coding sequence (CDS)

ATGACCTACCTTTTGTCTAACCTCTATCGTCAGTCTAAGGAAAGGTTCCTTCCCTTCTCAAATCTAAGGAAAAGTTCCTTCCCTTACGACTGCAGCCCTACAATATATTTCTACTTTCATTTCGCAGAGATTGAGAACTTAAGTTCTGGAACGGTTCAAGAAATAAGTATTGTGCTGAATGACATCTACTCCATTGCACCATCAATAATTCTCCAGTATCTCGTACCACGAACCATCACAACTTCCGCTGGTATCCCTGTTAATCTCAATGAAGAGAATTACTTGCGGATTTCTGCTGCTTTGGATTCGAAACTTCCTCCCATTATCAATGGGTTTGAGGTTTTTTACTTAGCAAACTCCGCCCAAGTACAAAAGGTGTGGGAAGTCAAGGTTTCTAGCATTTCAAAAGGGGCATAG

Protein sequence

MTYLLSNLYRQSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVPRTITTSAGIPVNLNEENYLRISAALDSKLPPIINGFEVFYLANSAQVQKVWEVKVSSISKGA

Homology

[Close]

BLAST of IVF0009281 vs. ExPASy TrEMBL
Match: A0A5A7T7F6 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00640 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.2e-69
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MTYLLSNLYRQSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLN 60
           MTYLLSNLYRQSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLN
Sbjct: 15  MTYLLSNLYRQSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLN 74

Query: 61  DIYSIAPSIILQYLVPRTITTSAGIPVNLNEENYLRISAALDSKLPPIINGFEVFYLANS 120
           DIYSIAPSIILQYLVPRTITTSAGIPVNLNEENYLRISAALDSKLPPIINGFEVFYLANS
Sbjct: 75  DIYSIAPSIILQYLVPRTITTSAGIPVNLNEENYLRISAALDSKLPPIINGFEVFYLANS 134

Query: 121 AQVQKVWEVKVSSISKGA 139
           AQVQKVWEVKVSSISKGA
Sbjct: 135 AQVQKVWEVKVSSISKGA 152

[Close]

BLAST of IVF0009281 vs. ExPASy TrEMBL
Match: A0A5D3BWH6 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00510 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36
Identity = 87/112 (77.68%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 27  FPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVPRTI-TTSAGI 86
           FPYD SPTIYF FHFAEIE LSSGT++EISIVLNDIY+IAPS+ILQYLVPRTI TTSAGI
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVILQYLVPRTICTTSAGI 329

Query: 87  PVNLNEENYLRISAALDSKLPPIINGFEVFYLAN-------SAQVQKVWEVK 131
           PVNLNEENYLRISAA  SKLPPIINGFEVFY AN       S  V  V ++K
Sbjct: 330 PVNLNEENYLRISAASGSKLPPIINGFEVFYFANLSYSPTFSQDVNAVMDIK 381

[Close]

BLAST of IVF0009281 vs. ExPASy TrEMBL
Match: A0A5A7UZ54 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G001960 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36
Identity = 87/112 (77.68%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 27  FPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVPRTI-TTSAGI 86
           FPYD SPTIYF FHFAEIE LSSGT++EISIVLNDIY+IAPS+ILQYLVPRTI TTSAGI
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVILQYLVPRTICTTSAGI 329

Query: 87  PVNLNEENYLRISAALDSKLPPIINGFEVFYLAN-------SAQVQKVWEVK 131
           PVNLNEENYLRISAA  SKLPPIINGFEVFY AN       S  V  V ++K
Sbjct: 330 PVNLNEENYLRISAASGSKLPPIINGFEVFYFANLSYSPTFSQDVNAVMDIK 381

[Close]

BLAST of IVF0009281 vs. ExPASy TrEMBL
Match: A0A1S3CGW4 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 OS=Cucumis melo OX=3656 GN=LOC103500767 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36
Identity = 87/112 (77.68%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 27  FPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVPRTI-TTSAGI 86
           FPYD SPTIYF FHFAEIE LSSGT++EISIVLNDIY+IAPS+ILQYLVPRTI TTSAGI
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVILQYLVPRTICTTSAGI 329

Query: 87  PVNLNEENYLRISAALDSKLPPIINGFEVFYLAN-------SAQVQKVWEVK 131
           PVNLNEENYLRISAA  SKLPPIINGFEVFY AN       S  V  V ++K
Sbjct: 330 PVNLNEENYLRISAASGSKLPPIINGFEVFYFANLSYSPTFSQDVNAVMDIK 381

[Close]

BLAST of IVF0009281 vs. ExPASy TrEMBL
Match: A0A0A0K795 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G452250 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.0e-35
Identity = 84/112 (75.00%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 27  FPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVPRTI-TTSAGI 86
           FPYD SPTIYF FHFAEIE LSSGTV+E+SIVLNDIY+IAPS+ILQYLVP+TI TTSAGI
Sbjct: 267 FPYDFSPTIYFCFHFAEIEKLSSGTVREMSIVLNDIYTIAPSVILQYLVPQTICTTSAGI 326

Query: 87  PVNLNEENYLRISAALDSKLPPIINGFEVFYLAN-------SAQVQKVWEVK 131
           PVN+NEENYLRISAA  SKLPPIINGFE+FY AN       S  V  V ++K
Sbjct: 327 PVNINEENYLRISAASGSKLPPIINGFELFYFANLSYSPTFSQDVNAVMDIK 378

[Close]

BLAST of IVF0009281 vs. NCBI nr
Match: KAA0037487.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa] >TYK01963.1 putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 266 bits (681), Expect = 1.57e-89
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MTYLLSNLYRQSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLN 60
           MTYLLSNLYRQSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLN
Sbjct: 15  MTYLLSNLYRQSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLN 74

Query: 61  DIYSIAPSIILQYLVPRTITTSAGIPVNLNEENYLRISAALDSKLPPIINGFEVFYLANS 120
           DIYSIAPSIILQYLVPRTITTSAGIPVNLNEENYLRISAALDSKLPPIINGFEVFYLANS
Sbjct: 75  DIYSIAPSIILQYLVPRTITTSAGIPVNLNEENYLRISAALDSKLPPIINGFEVFYLANS 134

Query: 121 AQVQKVWEVKVSSISKGA 138
           AQVQKVWEVKVSSISKGA
Sbjct: 135 AQVQKVWEVKVSSISKGA 152

[Close]

BLAST of IVF0009281 vs. NCBI nr
Match: KAA0067290.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (376), Expect = 6.43e-43
Identity = 85/118 (72.03%), Postives = 85/118 (72.03%), Query Frame = 0


Query: 2   TYLLSNLYRQSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLND 61
           TYL SNL RQSKERFLPFSNLRK SFPYDCSPTIYF FHF EIENLSSGT          
Sbjct: 16  TYLSSNLCRQSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT---------- 75

Query: 62  IYSIAPSIILQYLVPRTITTSAGIPVNLNEENYLRISAALDSKLPPIINGFEVFYLAN 119
                      YLVPRTITTSA IPVNLNEENYLRI AA DSKLPP    FEVFYLAN
Sbjct: 76  -----------YLVPRTITTSAVIPVNLNEENYLRIFAAFDSKLPP---WFEVFYLAN 109

[Close]

BLAST of IVF0009281 vs. NCBI nr
Match: XP_008462394.1 (PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 [Cucumis melo])

HSP 1 Score: 159 bits (401), Expect = 5.55e-42
Identity = 87/112 (77.68%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 27  FPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVPRTI-TTSAGI 86
           FPYD SPTIYF FHFAEIE LSSGT++EISIVLNDIY+IAPS+ILQYLVPRTI TTSAGI
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVILQYLVPRTICTTSAGI 329

Query: 87  PVNLNEENYLRISAALDSKLPPIINGFEVFYLAN-------SAQVQKVWEVK 130
           PVNLNEENYLRISAA  SKLPPIINGFEVFY AN       S  V  V ++K
Sbjct: 330 PVNLNEENYLRISAASGSKLPPIINGFEVFYFANLSYSPTFSQDVNAVMDIK 381

[Close]

BLAST of IVF0009281 vs. NCBI nr
Match: KAA0059466.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (401), Expect = 5.70e-42
Identity = 87/112 (77.68%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 27  FPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVPRTI-TTSAGI 86
           FPYD SPTIYF FHFAEIE LSSGT++EISIVLNDIY+IAPS+ILQYLVPRTI TTSAGI
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVILQYLVPRTICTTSAGI 329

Query: 87  PVNLNEENYLRISAALDSKLPPIINGFEVFYLAN-------SAQVQKVWEVK 130
           PVNLNEENYLRISAA  SKLPPIINGFEVFY AN       S  V  V ++K
Sbjct: 330 PVNLNEENYLRISAASGSKLPPIINGFEVFYFANLSYSPTFSQDVNAVMDIK 381

[Close]

BLAST of IVF0009281 vs. NCBI nr
Match: TYK03857.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (401), Expect = 5.72e-42
Identity = 87/112 (77.68%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 27  FPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVPRTI-TTSAGI 86
           FPYD SPTIYF FHFAEIE LSSGT++EISIVLNDIY+IAPS+ILQYLVPRTI TTSAGI
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVILQYLVPRTICTTSAGI 329

Query: 87  PVNLNEENYLRISAALDSKLPPIINGFEVFYLAN-------SAQVQKVWEVK 130
           PVNLNEENYLRISAA  SKLPPIINGFEVFY AN       S  V  V ++K
Sbjct: 330 PVNLNEENYLRISAASGSKLPPIINGFEVFYFANLSYSPTFSQDVNAVMDIK 381

[Close]

BLAST of IVF0009281 vs. TAIR 10
Match: AT3G46400.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-05
Identity = 37/118 (31.36%), Postives = 60/118 (50.85%), Query Frame = 0


Query: 17  LPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVP 76
           +P S  +   FP D    +YFYFHF+EI+ L +   +E SI+ N    I P++  +YL  
Sbjct: 260 VPLSFTKDLEFPKD---KLYFYFHFSEIQPLQANQSREFSILWNG-EIIIPTLSPKYLKA 319

Query: 77  RTITTSAGIPVNLNEENYLRISAALDSKLPPIINGFEVFYLANSAQVQKVWEVKVSSI 135
            T+ + +     +  +  L +    +S LPP++   EVF + +  Q  K  E  VS+I
Sbjct: 320 STLYSVSPFVCEVG-KCLLELKRTQNSTLPPLLTAIEVFTVIDFPQ-SKTNEDDVSAI 371

[Close]

BLAST of IVF0009281 vs. TAIR 10
Match: AT3G46370.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 45.8 bits (107), Expect = 3.2e-05
Identity = 31/96 (32.29%), Postives = 48/96 (50.00%), Query Frame = 0


Query: 27  FPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSIILQYLVPRTITTSAGIP 86
           FP+D    +Y YFHF+E++ L +   +E SI+ N +  I P  I  YL   T+   +   
Sbjct: 181 FPHD---ELYLYFHFSEVQVLQANQSREFSILWNGMV-IYPDFIPDYLGAATVYNPSPSL 240

Query: 87  VNLNEENYLRISAALDSKLPPIINGFEVFYLANSAQ 123
             +  +  L +     S LPP++N  EVF + N  Q
Sbjct: 241 CEVG-KCLLELERTQKSTLPPLLNAIEVFTVMNFPQ 271

The following BLAST results are available for this feature:

BLAST of IVF0009281 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7F6	4.2e-69	100.00	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu...	[more]
A0A5D3BWH6	1.2e-36	77.68	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu...	[more]
A0A5A7UZ54	1.2e-36	77.68	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu...	[more]
A0A1S3CGW4	1.2e-36	77.68	putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g1...	[more]
A0A0A0K795	3.0e-35	75.00	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G452...	[more]

BLAST of IVF0009281 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037487.1	1.57e-89	100.00	putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu...	[more]
KAA0067290.1	6.43e-43	72.03	putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu...	[more]
XP_008462394.1	5.55e-42	77.68	PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein k...	[more]
KAA0059466.1	5.70e-42	77.68	putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu...	[more]
TYK03857.1	5.72e-42	77.68	putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu...	[more]

BLAST of IVF0009281 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46400.1	1.4e-05	31.36	Leucine-rich repeat protein kinase family protein	[more]
AT3G46370.1	3.2e-05	32.29	Leucine-rich repeat protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024788	Malectin-like domain	PFAM	PF12819	Malectin_like	coord: 30..116 e-value: 6.6E-13 score: 48.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009281.1	IVF0009281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity