IVF0009258 (gene) Melon (IVF77) v1

Overview
NameIVF0009258
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPolyprotein
Locationchr01: 4916057 .. 4916365 (+)
RNA-Seq ExpressionIVF0009258
SyntenyIVF0009258
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTAATCTAGAACGATCTTCCATGACGATCCCCAAGCTCTTAGACTGGAGCGAGTTAACTCGCAATTCGATCTGGTCAATCGAGCACGCAACTGTCTTTAGAACTAGGCAAAGCAGTATGGCTCAAATAACCGAATATGATGATGGGCATGTCGAAGTCCAATTTCAAGAAGAATCCCATCAGCCTCCAATAAGAGAAATATATAGTGGACGGTCTAGTGTTTCAAAATACCAACCAACCACTAGGGAAAGACCACTTCCCCAGTCTGTTTGCGAGGGATTGTCCTTTGATTTGTACGGGTGA

mRNA sequence

ATGGAAGTTAATCTAGAACGATCTTCCATGACGATCCCCAAGCTCTTAGACTGGAGCGAGTTAACTCGCAATTCGATCTGGTCAATCGAGCACGCAACTGTCTTTAGAACTAGGCAAAGCAGTATGGCTCAAATAACCGAATATGATGATGGGCATGTCGAAGTCCAATTTCAAGAAGAATCCCATCAGCCTCCAATAAGAGAAATATATAGTGGACGGTCTAGTGTTTCAAAATACCAACCAACCACTAGGGAAAGACCACTTCCCCAGTCTGTTTGCGAGGGATTGTCCTTTGATTTGTACGGGTGA

Coding sequence (CDS)

ATGGAAGTTAATCTAGAACGATCTTCCATGACGATCCCCAAGCTCTTAGACTGGAGCGAGTTAACTCGCAATTCGATCTGGTCAATCGAGCACGCAACTGTCTTTAGAACTAGGCAAAGCAGTATGGCTCAAATAACCGAATATGATGATGGGCATGTCGAAGTCCAATTTCAAGAAGAATCCCATCAGCCTCCAATAAGAGAAATATATAGTGGACGGTCTAGTGTTTCAAAATACCAACCAACCACTAGGGAAAGACCACTTCCCCAGTCTGTTTGCGAGGGATTGTCCTTTGATTTGTACGGGTGA

Protein sequence

MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEESHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFDLYG
Homology
[Close]
BLAST of IVF0009258 vs. ExPASy TrEMBL
Match: A0A5D3C908 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001150 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 6.4e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 60
           MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE
Sbjct: 3   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 62

Query: 61  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFDLYG 103
           SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFDLYG
Sbjct: 63  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFDLYG 104

[Close]
BLAST of IVF0009258 vs. ExPASy TrEMBL
Match: A0A5D3CLG3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 77/99 (77.78%), Postives = 87/99 (87.88%), Query Frame = 0 

Query: 1   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 60
           MEVNLERSSMT+PKLLDWS+LTRN +W+IEH T  RTR+SS AQITEYDDGHVEVQFQEE
Sbjct: 3   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 62

Query: 61  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFD 100
            H PPIREIY+GRSSVS+YQPTTRERP+P+S    +S D
Sbjct: 63  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVD 101

[Close]
BLAST of IVF0009258 vs. ExPASy TrEMBL
Match: A0A5D3CBV5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00910 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 0 

Query: 1   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 60
           MEVNLER SM +PKLLDWSELTRNS+WSIEHAT  RTRQS+ AQI EYDDGHVEVQFQEE
Sbjct: 3   MEVNLERFSMMVPKLLDWSELTRNSVWSIEHATAPRTRQSNTAQIIEYDDGHVEVQFQEE 62

Query: 61  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFD 100
            HQPPIREIYSGRSSVS+Y+PTTRERP+  S    ++ D
Sbjct: 63  PHQPPIREIYSGRSSVSEYRPTTRERPILMSTSMRMAVD 101

[Close]
BLAST of IVF0009258 vs. ExPASy TrEMBL
Match: A0A5A7SRU6 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00880 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.3e-31
Identity = 74/98 (75.51%), Postives = 80/98 (81.63%), Query Frame = 0 

Query: 1   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 60
           M+VNLERSSM + KLLDWSELTRN IWSIEHAT  RTRQSS  QITEYDDGHVEVQFQEE
Sbjct: 236 MKVNLERSSMMVLKLLDWSELTRNPIWSIEHATTPRTRQSSTTQITEYDDGHVEVQFQEE 295

Query: 61  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSF 99
           SH+PPIREIYSG SSVS+Y+PTT  +PL      G  F
Sbjct: 296 SHEPPIREIYSGWSSVSEYRPTT-SKPLTWRTTIGKEF 332

[Close]
BLAST of IVF0009258 vs. ExPASy TrEMBL
Match: A0A5A7U9B4 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001110 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24
Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 0 

Query: 10 MTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEESHQPPIREI 69
          MT+ KLL+WSELT N +W+IEHATV RTRQSS  QI EY DGHVEVQFQEE HQPP REI
Sbjct: 1  MTVLKLLNWSELTCNPVWTIEHATVPRTRQSSTTQIIEY-DGHVEVQFQEEPHQPPNREI 60

Query: 70 YSGRSSVSKYQPTTRERPLPQS 92
           SGRSS+S+Y+PTTRERP+ +S
Sbjct: 61 CSGRSSISEYRPTTRERPITKS 81

[Close]
BLAST of IVF0009258 vs. NCBI nr
Match: KAA0050620.1 (hypothetical protein E6C27_scaffold673G00840 [Cucumis melo var. makuwa] >TYK07820.1 hypothetical protein E5676_scaffold1737G001150 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (532), Expect = 3.86e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 60
           MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE
Sbjct: 3   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 62

Query: 61  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFDLYG 102
           SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFDLYG
Sbjct: 63  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFDLYG 104

[Close]
BLAST of IVF0009258 vs. NCBI nr
Match: KAA0049723.1 (polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (409), Expect = 8.95e-47
Identity = 77/99 (77.78%), Postives = 87/99 (87.88%), Query Frame = 0 

Query: 1   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 60
           MEVNLERSSMT+PKLLDWS+LTRN +W+IEH T  RTR+SS AQITEYDDGHVEVQFQEE
Sbjct: 3   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 62

Query: 61  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFD 99
            H PPIREIY+GRSSVS+YQPTTRERP+P+S    +S D
Sbjct: 63  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVD 101

[Close]
BLAST of IVF0009258 vs. NCBI nr
Match: KAA0050634.1 (hypothetical protein E6C27_scaffold673G001010 [Cucumis melo var. makuwa] >TYK07799.1 hypothetical protein E5676_scaffold1737G00910 [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (400), Expect = 9.30e-47
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 0 

Query: 1   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 60
           MEVNLER SM +PKLLDWSELTRNS+WSIEHAT  RTRQS+ AQI EYDDGHVEVQFQEE
Sbjct: 3   MEVNLERFSMMVPKLLDWSELTRNSVWSIEHATAPRTRQSNTAQIIEYDDGHVEVQFQEE 62

Query: 61  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFD 99
            HQPPIREIYSGRSSVS+Y+PTTRERP+  S    ++ D
Sbjct: 63  PHQPPIREIYSGRSSVSEYRPTTRERPILMSTSMRMAVD 101

[Close]
BLAST of IVF0009258 vs. NCBI nr
Match: KAA0033914.1 (polyprotein [Cucumis melo var. makuwa] >TYK01296.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (362), Expect = 4.77e-39
Identity = 74/98 (75.51%), Postives = 80/98 (81.63%), Query Frame = 0 

Query: 1   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 60
           M+VNLERSSM + KLLDWSELTRN IWSIEHAT  RTRQSS  QITEYDDGHVEVQFQEE
Sbjct: 236 MKVNLERSSMMVLKLLDWSELTRNPIWSIEHATTPRTRQSSTTQITEYDDGHVEVQFQEE 295

Query: 61  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSF 98
           SH+PPIREIYSG SSVS+Y+PTT  +PL      G  F
Sbjct: 296 SHEPPIREIYSGWSSVSEYRPTT-SKPLTWRTTIGKEF 332

[Close]
BLAST of IVF0009258 vs. NCBI nr
Match: KAA0050195.1 (polyprotein [Cucumis melo var. makuwa] >TYJ98214.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (306), Expect = 2.34e-31
Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 0 

Query: 10 MTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEESHQPPIREI 69
          MT+ KLL+WSELT N +W+IEHATV RTRQSS  QI EYD GHVEVQFQEE HQPP REI
Sbjct: 1  MTVLKLLNWSELTCNPVWTIEHATVPRTRQSSTTQIIEYD-GHVEVQFQEEPHQPPNREI 60

Query: 70 YSGRSSVSKYQPTTRERPLPQS 91
           SGRSS+S+Y+PTTRERP+ +S
Sbjct: 61 CSGRSSISEYRPTTRERPITKS 81

The following BLAST results are available for this feature:
BLAST of IVF0009258 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0009258 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C9086.4e-51100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CLG31.5e-3677.78Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE... [more]
A0A5D3CBV51.7e-3577.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SRU64.3e-3175.51Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00880 PE=... [more]
A0A5A7U9B41.4e-2474.39Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001110 P... [more]
BLAST of IVF0009258 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050620.13.86e-68100.00hypothetical protein E6C27_scaffold673G00840 [Cucumis melo var. makuwa] >TYK0782... [more]
KAA0049723.18.95e-4777.78polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var... [more]
KAA0050634.19.30e-4777.78hypothetical protein E6C27_scaffold673G001010 [Cucumis melo var. makuwa] >TYK077... [more]
KAA0033914.14.77e-3975.51polyprotein [Cucumis melo var. makuwa] >TYK01296.1 polyprotein [Cucumis melo var... [more]
KAA0050195.12.34e-3174.39polyprotein [Cucumis melo var. makuwa] >TYJ98214.1 polyprotein [Cucumis melo var... [more]
BLAST of IVF0009258 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0009258.1IVF0009258.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004190 aspartic-type endopeptidase activity