IVF0009245 (gene) Melon (IVF77) v1

Overview
NameIVF0009245
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 3624767 .. 3625102 (-)
RNA-Seq ExpressionIVF0009245
SyntenyIVF0009245
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGGCCTAAAACTAGTACTGCAGCCATTATCACTGCTGTTTCTTCTTCTTCTTCTTCTAACTCTCTAAACTTCTCTTCCATGAAGCTCTTTCAACGAATCCGAAAGATGCTCGTACGGTTCGTCTTTTCTATCCCATCTCGAGTGTCATCATCGTCGAGACGAAGAACAAGCTATGACAAGTCGTTTGATCCACCAAAAACTTCGTGTAGCTCTTATTACTCTTCCCATTCCCACTACGATGAGGCCATTGCCGATTGTATTGAGTTTTTCAACAAGTCGTCGCAAGAGAGGGTTTTTGAAGCTCAAAAACCAATCACTAATTTGGTATGA

mRNA sequence

ATGCAAAGGCCTAAAACTAGTACTGCAGCCATTATCACTGCTGTTTCTTCTTCTTCTTCTTCTAACTCTCTAAACTTCTCTTCCATGAAGCTCTTTCAACGAATCCGAAAGATGCTCGTACGGTTCGTCTTTTCTATCCCATCTCGAGTGTCATCATCGTCGAGACGAAGAACAAGCTATGACAAGTCGTTTGATCCACCAAAAACTTCGTGTAGCTCTTATTACTCTTCCCATTCCCACTACGATGAGGCCATTGCCGATTGTATTGAGTTTTTCAACAAGTCGTCGCAAGAGAGGGTTTTTGAAGCTCAAAAACCAATCACTAATTTGGTATGA

Coding sequence (CDS)

ATGCAAAGGCCTAAAACTAGTACTGCAGCCATTATCACTGCTGTTTCTTCTTCTTCTTCTTCTAACTCTCTAAACTTCTCTTCCATGAAGCTCTTTCAACGAATCCGAAAGATGCTCGTACGGTTCGTCTTTTCTATCCCATCTCGAGTGTCATCATCGTCGAGACGAAGAACAAGCTATGACAAGTCGTTTGATCCACCAAAAACTTCGTGTAGCTCTTATTACTCTTCCCATTCCCACTACGATGAGGCCATTGCCGATTGTATTGAGTTTTTCAACAAGTCGTCGCAAGAGAGGGTTTTTGAAGCTCAAAAACCAATCACTAATTTGGTATGA

Protein sequence

MQRPKTSTAAIITAVSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQERVFEAQKPITNLV
Homology
BLAST of IVF0009245 vs. ExPASy TrEMBL
Match: A0A0A0LDK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872120 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-44
Identity = 101/111 (90.99%), Postives = 103/111 (92.79%), Query Frame = 0

Query: 1   MQRPKTSTAAIITAVSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60
           MQRPKTS A I    SSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY
Sbjct: 1   MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60

Query: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQERVFEAQKPITNLV 112
           DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQ+R FE QKPITNL+
Sbjct: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPITNLM 111

BLAST of IVF0009245 vs. ExPASy TrEMBL
Match: A0A371F207 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_48306 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.9e-21
Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = 0

Query: 24  LNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDE 83
           LN S+MKLFQR RK+L+R VFS+PSR SS SR + S    F+PPKTSCSSYYSS+SHY+E
Sbjct: 35  LNLSAMKLFQRFRKILMRLVFSVPSRRSSDSRHKVS--DRFEPPKTSCSSYYSSYSHYNE 94

Query: 84  AIADCIEFFNKSSQERVFEAQK 106
           AIADCIEFFNKS+Q+ V +A+K
Sbjct: 95  AIADCIEFFNKSAQDGVLDARK 114

BLAST of IVF0009245 vs. ExPASy TrEMBL
Match: A0A6P6FUZ0 (uncharacterized protein LOC107408298 OS=Ziziphus jujuba OX=326968 GN=LOC107408298 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.2e-20
Identity = 59/103 (57.28%), Postives = 75/103 (72.82%), Query Frame = 0

Query: 13  TAVSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSR----------RRTSYDK 72
           T  S+++++  LN S+MKLF R RK+L+R +FS+P R S SS           R+ + D+
Sbjct: 32  TGTSTTTTTTKLNLSAMKLFNRFRKILMRLIFSLPPRGSCSSSSSSATPGMTPRQRNCDR 91

Query: 73  SFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQERVFEAQK 106
           SFDPPKTSCSSYYSSHSHY+EAIADCIEFFNKSSQE   + +K
Sbjct: 92  SFDPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSQEGGLDGRK 134

BLAST of IVF0009245 vs. ExPASy TrEMBL
Match: A0A2P5F7X5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_102710 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.9e-20
Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 0

Query: 6   TSTAAIITAVSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSR--VSSSSRRRTSYDKS 65
           T+T   + A+   S   +LN S+MK+F R RK+L+R + S+PSR   SSSS  + + D  
Sbjct: 27  TTTTTSLEALQYKSPQANLNLSAMKIFNRFRKLLMRLILSLPSRGKSSSSSAMQRNGDVR 86

Query: 66  FDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQERVFEAQK 106
           FDPPKTSCSSYYSSHSHY+EAIADCIEFFNKSSQE + + +K
Sbjct: 87  FDPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSQEGILDGRK 128

BLAST of IVF0009245 vs. ExPASy TrEMBL
Match: A0A6J1ADC8 (uncharacterized protein LOC110417084 OS=Herrania umbratica OX=108875 GN=LOC110417084 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.4e-20
Identity = 58/93 (62.37%), Postives = 73/93 (78.49%), Query Frame = 0

Query: 17  SSSSSNSLNFSSMKLFQRIRKMLVRFVFSIP----SRVSSSSRRRTSYDKSFDPPKTSCS 76
           +S+ S  LNFS+MKLF R RK+L+R +FS+P    S  SS + ++T+ D+ FDPPKTSCS
Sbjct: 29  ASTLSPKLNFSAMKLFNRFRKILMRLIFSLPSGGSSGTSSMAAKQTNCDR-FDPPKTSCS 88

Query: 77  SYYSSHSHYDEAIADCIEFFNKSSQERVFEAQK 106
           SYYSSHSHY EAIADCIEFFNKSSQE + + +K
Sbjct: 89  SYYSSHSHYTEAIADCIEFFNKSSQEGIMDGRK 120

BLAST of IVF0009245 vs. NCBI nr
Match: KGN60030.1 (hypothetical protein Csa_001336 [Cucumis sativus])

HSP 1 Score: 188 bits (477), Expect = 1.72e-59
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0

Query: 1   MQRPKTSTAAIITAVSSSSSS-NSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTS 60
           MQRPKTS AA+ITAVSSSSSS NSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTS
Sbjct: 1   MQRPKTS-AALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTS 60

Query: 61  YDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQERVFEAQKPITNLV 111
           YDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQ+R FE QKPITNL+
Sbjct: 61  YDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPITNLM 111

BLAST of IVF0009245 vs. NCBI nr
Match: KAG7024157.1 (hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119 bits (299), Expect = 7.43e-33
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 0

Query: 29 MKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADC 88
          MKLF RIRK+LVRFVFS+PSRVSS  R+RT+YDK +DPPKTSCSSYYSSHSHYDEAIADC
Sbjct: 1  MKLFHRIRKILVRFVFSLPSRVSS--RQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADC 60

Query: 89 IEFFNKSSQE 98
          IEFFNKSSQ+
Sbjct: 61 IEFFNKSSQD 68

BLAST of IVF0009245 vs. NCBI nr
Match: XP_020218596.2 (uncharacterized protein LOC109801863 [Cajanus cajan])

HSP 1 Score: 111 bits (278), Expect = 6.05e-29
Identity = 58/82 (70.73%), Postives = 71/82 (86.59%), Query Frame = 0

Query: 24  LNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDE 83
           LN S+MKLFQR RK+L+RFVFS+PSR SS SR + S D+ F+PPKTSCSSYYSS+SHY+E
Sbjct: 47  LNLSAMKLFQRFRKILMRFVFSVPSRRSSDSRHKVS-DR-FEPPKTSCSSYYSSYSHYNE 106

Query: 84  AIADCIEFFNKSSQERVFEAQK 105
           AIADCIEFFNKS+Q+ V + +K
Sbjct: 107 AIADCIEFFNKSAQDGVLDGRK 126

BLAST of IVF0009245 vs. NCBI nr
Match: RDX72233.1 (hypothetical protein CR513_48306, partial [Mucuna pruriens])

HSP 1 Score: 110 bits (276), Expect = 8.61e-29
Identity = 58/82 (70.73%), Postives = 71/82 (86.59%), Query Frame = 0

Query: 24  LNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSYDKSFDPPKTSCSSYYSSHSHYDE 83
           LN S+MKLFQR RK+L+R VFS+PSR SS SR + S D+ F+PPKTSCSSYYSS+SHY+E
Sbjct: 35  LNLSAMKLFQRFRKILMRLVFSVPSRRSSDSRHKVS-DR-FEPPKTSCSSYYSSYSHYNE 94

Query: 84  AIADCIEFFNKSSQERVFEAQK 105
           AIADCIEFFNKS+Q+ V +A+K
Sbjct: 95  AIADCIEFFNKSAQDGVLDARK 114

BLAST of IVF0009245 vs. NCBI nr
Match: XP_024925739.1 (uncharacterized protein LOC107408298 [Ziziphus jujuba])

HSP 1 Score: 109 bits (272), Expect = 6.54e-28
Identity = 59/103 (57.28%), Postives = 75/103 (72.82%), Query Frame = 0

Query: 13  TAVSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSR----------RRTSYDK 72
           T  S+++++  LN S+MKLF R RK+L+R +FS+P R S SS           R+ + D+
Sbjct: 32  TGTSTTTTTTKLNLSAMKLFNRFRKILMRLIFSLPPRGSCSSSSSSATPGMTPRQRNCDR 91

Query: 73  SFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQERVFEAQK 105
           SFDPPKTSCSSYYSSHSHY+EAIADCIEFFNKSSQE   + +K
Sbjct: 92  SFDPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSQEGGLDGRK 134

BLAST of IVF0009245 vs. TAIR 10
Match: AT1G75717.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-12
Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 0

Query: 29 MKLFQRIRKMLVR---FVFSIPSRVSSSSRRRTSYDKSFDPPKTSC-SSYYSSHSHYDEA 88
          MKLF ++ K+L+R   F     SR    +  R+   + F+PPK SC SSYYSSH HY EA
Sbjct: 1  MKLFHKLGKILMRLIDFTLHSSSRRQKKNNSRSGDGERFEPPKISCSSSYYSSHVHYSEA 60

Query: 89 IADCIEFFNKSS 97
          IADCIEFFNKSS
Sbjct: 61 IADCIEFFNKSS 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LDK41.7e-4490.99Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872120 PE=4 SV=1[more]
A0A371F2079.9e-2169.51Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_48306 P... [more]
A0A6P6FUZ02.2e-2057.28uncharacterized protein LOC107408298 OS=Ziziphus jujuba OX=326968 GN=LOC10740829... [more]
A0A2P5F7X52.9e-2057.84Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_102710 PE=4 SV... [more]
A0A6J1ADC86.4e-2062.37uncharacterized protein LOC110417084 OS=Herrania umbratica OX=108875 GN=LOC11041... [more]
Match NameE-valueIdentityDescription
KGN60030.11.72e-5993.75hypothetical protein Csa_001336 [Cucumis sativus][more]
KAG7024157.17.43e-3385.71hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_020218596.26.05e-2970.73uncharacterized protein LOC109801863 [Cajanus cajan][more]
RDX72233.18.61e-2970.73hypothetical protein CR513_48306, partial [Mucuna pruriens][more]
XP_024925739.16.54e-2857.28uncharacterized protein LOC107408298 [Ziziphus jujuba][more]
Match NameE-valueIdentityDescription
AT1G75717.12.8e-1255.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..69
NoneNo IPR availablePANTHERPTHR35111:SF5F10A5.9coord: 1..105
NoneNo IPR availablePANTHERPTHR35111F10A5.9-RELATEDcoord: 1..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0009245.1IVF0009245.1mRNA