IVF0009176 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGCGATGACGTTGACGACGTGGACGAGGGGGACTCCGCGTACGCGACGACCACCACTTCAGAAGACATCCAATACATTGAGATGACAAACGAGTGGTCTCAGTGGCGCAACGAACTAACTGAATCGATGTTCACAGATTGGTAG ATGACATATTGCGATGACGTTGACGACGTGGACGAGGGGGACTCCGCGTACGCGACGACCACCACTTCAGAAGACATCCAATACATTGAGATGACAAACGAGTGGTCTCAGTGGCGCAACGAACTAACTGAATCGATGTTCACAGATTGGTAG ATGACATATTGCGATGACGTTGACGACGTGGACGAGGGGGACTCCGCGTACGCGACGACCACCACTTCAGAAGACATCCAATACATTGAGATGACAAACGAGTGGTCTCAGTGGCGCAACGAACTAACTGAATCGATGTTCACAGATTGGTAG MTYCDDVDDVDEGDSAYATTTTSEDIQYIEMTNEWSQWRNELTESMFTDW Homology
BLAST of IVF0009176 vs. ExPASy TrEMBL
Match: A0A5D3CLZ7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001290 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.2e-19 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of IVF0009176 vs. ExPASy TrEMBL
Match: A0A5D3BDZ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00280 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.9e-17 Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0009176 vs. ExPASy TrEMBL
Match: A0A5A7T0Z8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00710 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 5.1e-17 Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0009176 vs. ExPASy TrEMBL
Match: A0A5A7VGD3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00510 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 6.6e-17 Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0009176 vs. ExPASy TrEMBL
Match: A0A5D3BQ46 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001550 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 6.6e-17 Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0009176 vs. NCBI nr
Match: KAA0054316.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK12352.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 101 bits (252), Expect = 1.05e-24 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of IVF0009176 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 95.1 bits (235), Expect = 2.24e-24 Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0009176 vs. NCBI nr
Match: KAA0066137.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15182.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 7.13e-23 Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0009176 vs. NCBI nr
Match: TYK22655.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 89.7 bits (221), Expect = 3.07e-22 Identity = 43/50 (86.00%), Postives = 44/50 (88.00%), Query Frame = 0
BLAST of IVF0009176 vs. NCBI nr
Match: KAA0035723.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK30822.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 90.9 bits (224), Expect = 4.10e-22 Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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