IVF0009166 (gene) Melon (IVF77) v1

Overview


Name	IVF0009166
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Golgin family A protein
Location	chr01: 31869067 .. 31869860 (-)
RNA-Seq Expression	IVF0009166
Synteny	IVF0009166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGTATAGATATAGTTCGTCCGTCGAGAGTCGAGAGTTAAAAATGGTTGGTGTTTTTGCTGGTTCCACGAGTCTATGTTTGCCGGGAAATGCTTCAGCGGCGGCATGTGTGTGGAGAAGACGAAGCCGTGGAAATACAATTAGAAGCGAGGCAGAAGGGCAAAATCCGATTCCAGGCAGAGACCGGGTGATAGGGTTTGGAAAACACAAGGGCAAAATGCTTGGAACCCTTCCTTCAACCTATCTGAAATGGATCTCCAAAAACCTAAGAGCAAGAGAGTTCGAAGAGTGGGCGAGTTTAGCAGACCAAGTTCTGGAAGACCCGGTTTACCAAGACCGGGTCCAGTGGGAGTTCGCTCACAACGTTCTGACCGGCGCCGGTCGGAGTGGCCGTGACGACGTCGTTTCTGAGTTGTCGGAGATCAGCGACAGGTTTGGTTGGGATTGGGATAATAAATCCGGTTGGAGAGATGTGGATTTTGAGCTCTTGGGGACCTCGAAAGGTGGAAGAATTCCACGGCGAATTGAACCAACTCAGAATTCGGAATGGAAGACGGCGCGAAATGTATCAGGTGGCGGCGGCGGGGGAAGGAGGAGGGAGAGAAGAGATCGGTTGAGAGAGAAGCGAGAGAAATCGAAAGGAGGCGGCGAGAAAAGTGAAGGGAAAACGGAGAATGAGAATCCCGTTCCCAGGTTTAACAATCCCTTCCCTGGCCGTCAAGCTCTTCTAAAACGGGTTACCACAATTAAATCAGATTTGTTAGTTAAAAAGAAACCAAATTGGTAAGAGAAAG

mRNA sequence

TCGGTATAGATATAGTTCGTCCGTCGAGAGTCGAGAGTTAAAAATGGTTGGTGTTTTTGCTGGTTCCACGAGTCTATGTTTGCCGGGAAATGCTTCAGCGGCGGCATGTGTGTGGAGAAGACGAAGCCGTGGAAATACAATTAGAAGCGAGGCAGAAGGGCAAAATCCGATTCCAGGCAGAGACCGGGTGATAGGGTTTGGAAAACACAAGGGCAAAATGCTTGGAACCCTTCCTTCAACCTATCTGAAATGGATCTCCAAAAACCTAAGAGCAAGAGAGTTCGAAGAGTGGGCGAGTTTAGCAGACCAAGTTCTGGAAGACCCGGTTTACCAAGACCGGGTCCAGTGGGAGTTCGCTCACAACGTTCTGACCGGCGCCGGTCGGAGTGGCCGTGACGACGTCGTTTCTGAGTTGTCGGAGATCAGCGACAGGTTTGGTTGGGATTGGGATAATAAATCCGGTTGGAGAGATGTGGATTTTGAGCTCTTGGGGACCTCGAAAGGTGGAAGAATTCCACGGCGAATTGAACCAACTCAGAATTCGGAATGGAAGACGGCGCGAAATGTATCAGGTGGCGGCGGCGGGGGAAGGAGGAGGGAGAGAAGAGATCGGTTGAGAGAGAAGCGAGAGAAATCGAAAGGAGGCGGCGAGAAAAGTGAAGGGAAAACGGAGAATGAGAATCCCGTTCCCAGGTTTAACAATCCCTTCCCTGGCCGTCAAGCTCTTCTAAAACGGGTTACCACAATTAAATCAGATTTGTTAGTTAAAAAGAAACCAAATTGGTAAGAGAAAG

Coding sequence (CDS)

ATGGTTGGTGTTTTTGCTGGTTCCACGAGTCTATGTTTGCCGGGAAATGCTTCAGCGGCGGCATGTGTGTGGAGAAGACGAAGCCGTGGAAATACAATTAGAAGCGAGGCAGAAGGGCAAAATCCGATTCCAGGCAGAGACCGGGTGATAGGGTTTGGAAAACACAAGGGCAAAATGCTTGGAACCCTTCCTTCAACCTATCTGAAATGGATCTCCAAAAACCTAAGAGCAAGAGAGTTCGAAGAGTGGGCGAGTTTAGCAGACCAAGTTCTGGAAGACCCGGTTTACCAAGACCGGGTCCAGTGGGAGTTCGCTCACAACGTTCTGACCGGCGCCGGTCGGAGTGGCCGTGACGACGTCGTTTCTGAGTTGTCGGAGATCAGCGACAGGTTTGGTTGGGATTGGGATAATAAATCCGGTTGGAGAGATGTGGATTTTGAGCTCTTGGGGACCTCGAAAGGTGGAAGAATTCCACGGCGAATTGAACCAACTCAGAATTCGGAATGGAAGACGGCGCGAAATGTATCAGGTGGCGGCGGCGGGGGAAGGAGGAGGGAGAGAAGAGATCGGTTGAGAGAGAAGCGAGAGAAATCGAAAGGAGGCGGCGAGAAAAGTGAAGGGAAAACGGAGAATGAGAATCCCGTTCCCAGGTTTAACAATCCCTTCCCTGGCCGTCAAGCTCTTCTAAAACGGGTTACCACAATTAAATCAGATTTGTTAGTTAAAAAGAAACCAAATTGGTAA

Protein sequence

MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDVVSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGGGGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLLVKKKPNW

Homology

[Close]

BLAST of IVF0009166 vs. ExPASy TrEMBL
Match: A0A5D3BWA7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001890 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.1e-139
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60
           MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60

Query: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120
           GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV
Sbjct: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120

Query: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG 180
           VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG
Sbjct: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG 180

Query: 181 GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL 240
           GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL
Sbjct: 181 GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL 240

Query: 241 VKKKPNW 248
           VKKKPNW
Sbjct: 241 VKKKPNW 247

[Close]

BLAST of IVF0009166 vs. ExPASy TrEMBL
Match: A0A1S3CGX9 (uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.5e-138
Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0


Query: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60
           MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60

Query: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120
           GTLPSTYLKWISKNLRAREFEEWA LADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV
Sbjct: 61  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120

Query: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG 180
           VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG
Sbjct: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG 180

Query: 181 GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL 240
           GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL
Sbjct: 181 GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL 240

Query: 241 VKKKPNW 248
           VKKKPNW
Sbjct: 241 VKKKPNW 247

[Close]

BLAST of IVF0009166 vs. ExPASy TrEMBL
Match: A0A0A0K7H6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.2e-122
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60
           MV VFAGSTSLCLPGNA AAACV RRRS+G TIRSEAEG+NP+PGRDRVIGFGKHKGKML
Sbjct: 15  MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKML 74

Query: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120
           GTLPSTYLKWISKNLRAREFEEWA LADQVLEDP+YQDRVQWEFAHNVLTGAGRSGRD+V
Sbjct: 75  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGAGRSGRDNV 134

Query: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS--GG 180
           VSELSEISDRFGWDWDNKSGWR VDFELLGTSKGGRIPRRIEPTQ SE KTA+NVS  GG
Sbjct: 135 VSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVSGGGG 194

Query: 181 GGGGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSD 240
           GGGGRRRERRDRLREKREKS GGGEKSE KTE ENPVPRFNNPFPGRQALLKRV TIKSD
Sbjct: 195 GGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPGRQALLKRVATIKSD 254

Query: 241 LLVKKKPN 247
           LLVKKKPN
Sbjct: 255 LLVKKKPN 262

[Close]

BLAST of IVF0009166 vs. ExPASy TrEMBL
Match: A0A6J1JVI9 (uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.9e-73
Identity = 165/248 (66.53%), Postives = 178/248 (71.77%), Query Frame = 0


Query: 10  SLCLPGNASAAACVWRRRSRGNTIRSEA-EGQNPIPGRDRVIGFGKHKGKMLGTLPSTYL 69
           SLCL   A    C W  RS G+ IR+ A    NPIP RDRVIGFG+HKGKMLG LPS+YL
Sbjct: 2   SLCLQAKA-LPVCAW--RSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALPSSYL 61

Query: 70  KWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVL---TGAGRSGRDDVVSELS 129
           KWISKNLRAR+ EEWA LADQVLEDPVYQDR+QWEFAHN+L   TG G + RD VVSEL 
Sbjct: 62  KWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGTGRGGTARDGVVSELL 121

Query: 130 EISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS---GGGGGG 189
           EISDRFGWDWD   GWRDV+FELLGTSKGGRIPRR EP       TA+ VS   GGGGGG
Sbjct: 122 EISDRFGWDWDG-GGWRDVNFELLGTSKGGRIPRRAEP-------TAQKVSPGGGGGGGG 181

Query: 190 RRRERRDRLREKREKSKGGGEKSEGKTEN----------ENPVPRFNNPFPGRQALLKRV 241
           RR ERR+RLR KREKSKG  E+SE K EN          +NPV   N  FPGRQ LL R 
Sbjct: 182 RRSERRNRLRVKREKSKGVVERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRF 238

[Close]

BLAST of IVF0009166 vs. ExPASy TrEMBL
Match: A0A6J1GQE9 (uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC111456149 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 6.7e-70
Identity = 156/247 (63.16%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 10  SLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKMLGTLPSTYLK 69
           SLCL   A    C WR     N     A   NPIP RDRVIGFG+HKGKMLG LPS+YLK
Sbjct: 2   SLCLQAKA-LPVCAWRSDGIRN---RAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLK 61

Query: 70  WISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGA-GR--SGRDDVVSELSE 129
           WISKNLRAR+ EEWA LADQVLEDPVYQDR+QWEFAHN+L+G  GR  +GRD VVSEL E
Sbjct: 62  WISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGRRGTGRDGVVSELLE 121

Query: 130 ISDRFGWDWD---NKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGGGGR 189
           ISDRFGWDWD   +  GWRDV+FELLGTSKGGRIPRR +PT  ++  +     G GGGG+
Sbjct: 122 ISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPT--AQKVSPGGGGGSGGGGK 181

Query: 190 RRERRDRLREKREKSKGGGEKSEGKTEN----------ENPVPRFNNPFPGRQALLKRVT 241
           R ERRDRLR KREKSKG  E+SE + EN          +NPV   N  FPGRQ LL R T
Sbjct: 182 RSERRDRLRVKREKSKGVVERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFT 241

[Close]

BLAST of IVF0009166 vs. NCBI nr
Match: KAA0059334.1 (uncharacterized protein E6C27_scaffold242G00590 [Cucumis melo var. makuwa] >TYK03991.1 uncharacterized protein E5676_scaffold347G001890 [Cucumis melo var. makuwa])

HSP 1 Score: 503 bits (1294), Expect = 1.33e-179
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60
           MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60

Query: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120
           GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV
Sbjct: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120

Query: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG 180
           VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG
Sbjct: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG 180

Query: 181 GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL 240
           GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL
Sbjct: 181 GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL 240

Query: 241 VKKKPNW 247
           VKKKPNW
Sbjct: 241 VKKKPNW 247

[Close]

BLAST of IVF0009166 vs. NCBI nr
Match: XP_008462203.1 (PREDICTED: uncharacterized protein LOC103500617 [Cucumis melo])

HSP 1 Score: 500 bits (1288), Expect = 1.09e-178
Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0


Query: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60
           MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60

Query: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120
           GTLPSTYLKWISKNLRAREFEEWA LADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV
Sbjct: 61  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120

Query: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG 180
           VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG
Sbjct: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG 180

Query: 181 GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL 240
           GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL
Sbjct: 181 GGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSDLL 240

Query: 241 VKKKPNW 247
           VKKKPNW
Sbjct: 241 VKKKPNW 247

[Close]

BLAST of IVF0009166 vs. NCBI nr
Match: XP_004141831.3 (uncharacterized protein LOC101215921 [Cucumis sativus] >KGN45413.1 hypothetical protein Csa_015718 [Cucumis sativus])

HSP 1 Score: 447 bits (1151), Expect = 1.49e-157
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60
           MV VFAGSTSLCLPGNA AAACV RRRS+G TIRSEAEG+NP+PGRDRVIGFGKHKGKML
Sbjct: 15  MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKML 74

Query: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120
           GTLPSTYLKWISKNLRAREFEEWA LADQVLEDP+YQDRVQWEFAHNVLTGAGRSGRD+V
Sbjct: 75  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGAGRSGRDNV 134

Query: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGG 180
           VSELSEISDRFGWDWDNKSGWR VDFELLGTSKGGRIPRRIEPTQ SE KTA+NVSGGGG
Sbjct: 135 VSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVSGGGG 194

Query: 181 GG--RRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSD 240
           GG  RRRERRDRLREKREKS GGGEKSE KTE ENPVPRFNNPFPGRQALLKRV TIKSD
Sbjct: 195 GGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPGRQALLKRVATIKSD 254

Query: 241 LLVKKKPN 246
           LLVKKKPN
Sbjct: 255 LLVKKKPN 262

[Close]

BLAST of IVF0009166 vs. NCBI nr
Match: XP_038898819.1 (uncharacterized protein LOC120086315 [Benincasa hispida])

HSP 1 Score: 395 bits (1016), Expect = 3.99e-137
Identity = 202/253 (79.84%), Postives = 215/253 (84.98%), Query Frame = 0


Query: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRG--NTIRSEAEGQNP--IPGRDRVIGFGKHK 60
           MV + AGST LCL G   AA C+WRRRS G  N IRSEAEG+N   +PGRDRV+GFGKHK
Sbjct: 1   MVCILAGSTGLCLQGKTLAAVCMWRRRSDGIRNKIRSEAEGENENTVPGRDRVMGFGKHK 60

Query: 61  GKMLGTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSG 120
           GKMLGTLPSTYLKW+SKNLRAREFEEWA LADQVLEDPVYQDR+QWEFAHN+LTGAGR+G
Sbjct: 61  GKMLGTLPSTYLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNILTGAGRTG 120

Query: 121 RDDVVSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS 180
           RDDVVSEL EISDRFGWDW+NKSGWRDV+FELLGTSKGGRIPRRIE TQ SE KT  NVS
Sbjct: 121 RDDVVSELLEISDRFGWDWENKSGWRDVEFELLGTSKGGRIPRRIESTQKSESKTTDNVS 180

Query: 181 ---GGGGGGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVT 240
              GGGGGGRRRERR+RLR KREKSKG  EKSE KTE ENP PRFNNPFPGRQ LL R T
Sbjct: 181 SCAGGGGGGRRRERRNRLRVKREKSKGAEEKSEVKTETENPTPRFNNPFPGRQTLLNRFT 240

Query: 241 TIKSDLLVKKKPN 246
           T KS L +KK PN
Sbjct: 241 TTKSHLFIKKDPN 253

[Close]

BLAST of IVF0009166 vs. NCBI nr
Match: XP_022992375.1 (uncharacterized protein LOC111488702 [Cucurbita maxima])

HSP 1 Score: 285 bits (728), Expect = 1.55e-93
Identity = 165/248 (66.53%), Postives = 178/248 (71.77%), Query Frame = 0


Query: 10  SLCLPGNASAAACVWRRRSRGNTIRSEAEGQ-NPIPGRDRVIGFGKHKGKMLGTLPSTYL 69
           SLCL   A    C WR  S G+ IR+ A    NPIP RDRVIGFG+HKGKMLG LPS+YL
Sbjct: 2   SLCLQAKALP-VCAWR--SDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALPSSYL 61

Query: 70  KWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVL---TGAGRSGRDDVVSELS 129
           KWISKNLRAR+ EEWA LADQVLEDPVYQDR+QWEFAHN+L   TG G + RD VVSEL 
Sbjct: 62  KWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGTGRGGTARDGVVSELL 121

Query: 130 EISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS---GGGGGG 189
           EISDRFGWDWD   GWRDV+FELLGTSKGGRIPRR EPT       A+ VS   GGGGGG
Sbjct: 122 EISDRFGWDWDG-GGWRDVNFELLGTSKGGRIPRRAEPT-------AQKVSPGGGGGGGG 181

Query: 190 RRRERRDRLREKREKSKGGGEKSEGKTEN----------ENPVPRFNNPFPGRQALLKRV 240
           RR ERR+RLR KREKSKG  E+SE K EN          +NPV   N  FPGRQ LL R 
Sbjct: 182 RRSERRNRLRVKREKSKGVVERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRF 238

[Close]

BLAST of IVF0009166 vs. TAIR 10
Match: AT1G51080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 175.6 bits (444), Expect = 4.8e-44
Identity = 103/218 (47.25%), Postives = 137/218 (62.84%), Query Frame = 0


Query: 43  IPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQW 102
           +  RD +I FGKHKGKMLGTLPS+YLKW+SKNLRA  FE WA LAD+VLED VY+DR +W
Sbjct: 61  LAARDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRAGVFEYWAKLADEVLEDDVYKDRTEW 120

Query: 103 EFAHNVLTGAG---------RSGRDDV--VSELSEISDRFGWDWDNKSGWRDVDFELLGT 162
           EFA  +L G+          R  R++V  VS L EIS+RFGWD ++K GW  ++FELLGT
Sbjct: 121 EFAEKILHGSDESMRALTSVRKSREEVNSVSMLLEISERFGWDNEDKIGWSKINFELLGT 180

Query: 163 SKGGRIPRRIEPTQNSEWK---------TARNVSGGGGGGRRRERRDRLREKREKSKGGG 222
           SKGGRIPR  +  +  E +           +       G RR++RR+R+R+   +  G  
Sbjct: 181 SKGGRIPRLRKANEEEEERGEMVRRREIKKKEEEEDENGWRRKQRRERMRQSLGRDDGKT 240

Query: 223 -EKSE-----GKTEN--ENPVPRFNNPFPGRQALLKRV 233
             +SE     GK E+  +   P+  +PFPGR++LLK+V
Sbjct: 241 VNRSEQKGVLGKLEDVEKQLEPKIQSPFPGRESLLKKV 278

The following BLAST results are available for this feature:

BLAST of IVF0009166 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BWA7	3.1e-139	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CGX9	1.5e-138	99.60	uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=...	[more]
A0A0A0K7H6	1.2e-122	91.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1	[more]
A0A6J1JVI9	2.9e-73	66.53	uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702...	[more]
A0A6J1GQE9	6.7e-70	63.16	uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC1114561...	[more]

BLAST of IVF0009166 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059334.1	1.33e-179	100.00	uncharacterized protein E6C27_scaffold242G00590 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_008462203.1	1.09e-178	99.60	PREDICTED: uncharacterized protein LOC103500617 [Cucumis melo]	[more]
XP_004141831.3	1.49e-157	91.94	uncharacterized protein LOC101215921 [Cucumis sativus] >KGN45413.1 hypothetical ...	[more]
XP_038898819.1	3.99e-137	79.84	uncharacterized protein LOC120086315 [Benincasa hispida]	[more]
XP_022992375.1	1.55e-93	66.53	uncharacterized protein LOC111488702 [Cucurbita maxima]	[more]

BLAST of IVF0009166 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51080.1	4.8e-44	47.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..225
None	No IPR available	PANTHER	PTHR38357	EXPRESSED PROTEIN	coord: 24..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009166.1	IVF0009166.1	mRNA