IVF0009102 (gene) Melon (IVF77) v1

Overview


Name	IVF0009102
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Heavy metal-associated domain containing protein
Location	chr10: 1527908 .. 1529388 (+)
RNA-Seq Expression	IVF0009102
Synteny	IVF0009102

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGAAATGTGCAAGTGTTTGGTCATAGAAGCAACCTCGAAGGAATCATCATCCTTCCCTAGCGAGAAGAAAAAATTAGGCAAAGTCTTTTTGCGGAAAGCAGCTGTGATTGTGAAACCAACCATCTTTGTCAACTCTTTCTCATCGTCATCATCATTTCACTCTCACGGCTCCCCTTTTACTTACTCTCCATTATCTTCCTTCTCCCTTTTCCCAACCACTTATATAACAATCCAATCCCCTTTTTTCACCCACACATAAAAATCTTCTTCCTTTGAGTCGGAGGCGGAGCATGGCCGCGGTGGTGGTTGGAATCGGAGTTCGGAAGCAGAGGATTTTTCCTCATGCGTCTAGTCTTGCTTCCATTGAGTCCTTATCTCTGCCTCTCGTCTCTGCTTTTTCCTCTGTTTCTCTTGCATTTGTTCCGAAGTTGTCTTCTTGTTGTTGCTGCAATTTAATGGCGGACGGTTGTTGATTTTCAGGTTCAGGAAATTGTGTTGACAGCCGATATTGGTTGTGCTGAGTGTCAGAAGAAACTGGCCGATATACTCTCCAAAATGAATGGTGAATTTCTACTCTGTTTTTGGGGAATTTCATTCCATCTTAAGTAGTTTTTACTTTTGTTCATGTATGGAATTTGGTCTTTTAGCTTTGTTTTAAGGCTGTTTTTGGAAATATTGGGTATGGTTTGAGAATTATTTAGGCCTGTTTGTAAGTTTAGATTTTAATATCCATATCTTTGTTTTAGAATTTAATTAGGGTTTATTCAATAAATTTGAAATTCATAACTATAAATTTGTGGGTAAACAAACAAATTAAGGAATAAAATCCTTGTCAAAGCCAAAGGGAGCTTTAGAAAATTAATATCTTTACCTTTTGTTTTGGATTTTTTAATCTACCTTTTAGAGGTATGTCTTTTCCTGAATGTTTTACTAAGACTTGTTTTAGATTTTAAGAAGAAAAAAAAGCCGTTCTTTTAACTTGAGCTACATGGACTTCAACTTTTCAATATCAAAGTAGTATTTAAAAATCATTTTTATTAATTTGGAAAGATGAAAACTTTGATACGTACAGTTGAAAAACAAATAAAGCTTTTACGAAACTAGTAATTGATTATGAGGTAATTTGAATGTCGTTGATTTGATAATTTTTTGTTGGATATAGATACAGAGTCTGTGGTGGTTAATTTGTTGGACAAGAAAGTGATATTGACTCGAAGATCGCAAATTCCATCTAGAGTTTCAACGATCAAGAGATTGTTTGCTTCTCCTTGCAGATAACTATAAGTATATATGGGTTTTTTTTTTACTAAGGTTTGTTGATAAATGAATAATCGGATTGGTTGTTGTTTAGTTTGAAGAAAAAAAAGTTTAAGAGATTGCCTTTTTATTTATTTTGTTTCTTTTAAAATGAAAATATATTTGGATAGAATATAAATATTGCCTTTTGATGCAACAAGATCGCCATAGTACTTCAAAAGA

mRNA sequence

CCCGAAATGTGCAAGTGTTTGGTCATAGAAGCAACCTCGAAGGAATCATCATCCTTCCCTAGCGAGAAGAAAAAATTAGGCAAAGTCTTTTTGCGGAAAGCAGCTGTGATTGTGAAACCAACCATCTTTGTCAACTCTTTCTCATCGTCATCATCATTTCACTCTCACGGCTCCCCTTTTACTTACTCTCCATTATCTTCCTTCTCCCTTTTCCCAACCACTTATATAACAATCCAATCCCCTTTTTTCACCCACACATAAAAATCTTCTTCCTTTGAGTCGGAGGCGGAGCATGGCCGCGGTGGTGGTTGGAATCGGAGTTCGGAAGCAGAGGATTTTTCCTCATGCGTCTAGTCTTGCTTCCATTGAGTCCTTATCTCTGCCTCTCGTTCAGGAAATTGTGTTGACAGCCGATATTGGTTGTGCTGAGTGTCAGAAGAAACTGGCCGATATACTCTCCAAAATGAATGATACAGAGTCTGTGGTGGTTAATTTGTTGGACAAGAAAGTGATATTGACTCGAAGATCGCAAATTCCATCTAGAGTTTCAACGATCAAGAGATTGTTTGCTTCTCCTTGCAGATAACTATAAGTATATATGGGTTTTTTTTTTACTAAGGTTTGTTGATAAATGAATAATCGGATTGGTTGTTGTTTAGTTTGAAGAAAAAAAAGTTTAAGAGATTGCCTTTTTATTTATTTTGTTTCTTTTAAAATGAAAATATATTTGGATAGAATATAAATATTGCCTTTTGATGCAACAAGATCGCCATAGTACTTCAAAAGA

Coding sequence (CDS)

ATGGCCGCGGTGGTGGTTGGAATCGGAGTTCGGAAGCAGAGGATTTTTCCTCATGCGTCTAGTCTTGCTTCCATTGAGTCCTTATCTCTGCCTCTCGTTCAGGAAATTGTGTTGACAGCCGATATTGGTTGTGCTGAGTGTCAGAAGAAACTGGCCGATATACTCTCCAAAATGAATGATACAGAGTCTGTGGTGGTTAATTTGTTGGACAAGAAAGTGATATTGACTCGAAGATCGCAAATTCCATCTAGAGTTTCAACGATCAAGAGATTGTTTGCTTCTCCTTGCAGATAA

Protein sequence

MAAVVVGIGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDTESVVVNLLDKKVILTRRSQIPSRVSTIKRLFASPCR

Homology

[Close]

BLAST of IVF0009102 vs. ExPASy TrEMBL
Match: A0A0A0KT62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608570 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MAAVVVGIGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMND 60
          M AVVVGIGVRK+RIFPHASSLASIESL+LPLVQEIVLTADIGCAECQKKLA+ILSKMND
Sbjct: 1  MGAVVVGIGVRKKRIFPHASSLASIESLTLPLVQEIVLTADIGCAECQKKLANILSKMND 60

Query: 61 TESVVVNLLDKKVILTRRSQIPSRVSTIKRLFASPCR 98
          TESVVVNLLDKKVILTRRSQIPSRVSTI+RLFASPCR
Sbjct: 61 TESVVVNLLDKKVILTRRSQIPSRVSTIRRLFASPCR 97

[Close]

BLAST of IVF0009102 vs. ExPASy TrEMBL
Match: A0A6J1HUG9 (uncharacterized protein LOC111467567 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467567 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-32
Identity = 82/97 (84.54%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 2   AAVVVGIGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDT 61
           AA   GIGVRK +IFPHASSLASIESLSLPLVQEIV TADIGCAECQKKLA+ILSKMNDT
Sbjct: 9   AAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFTADIGCAECQKKLANILSKMNDT 68

Query: 62  ESVVVNLLDKKVILTRRSQIP-SRVSTIKRLFASPCR 98
           ESVVVNLLDKKVILTR+ QIP SRVST+KRL  S  R
Sbjct: 69  ESVVVNLLDKKVILTRKLQIPSSRVSTVKRLLGSSFR 105

[Close]

BLAST of IVF0009102 vs. ExPASy TrEMBL
Match: A0A6J1G188 (uncharacterized protein LOC111449743 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-29
Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 7   GIGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDTESVVV 66
           GIGVRK +IFPHASSLAS+ESLSLPLVQEIV  ADIGCAECQKKLA+IL+KMNDTESVVV
Sbjct: 12  GIGVRKLKIFPHASSLASVESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVV 71

Query: 67  NLLDKKVILTRRSQI-PSRVSTIKRLFAS 95
           NLLDKKVILTR+ QI  SRVSTIKRL  S
Sbjct: 72  NLLDKKVILTRKLQIQTSRVSTIKRLLGS 100

[Close]

BLAST of IVF0009102 vs. ExPASy TrEMBL
Match: A0A6J1DB71 (uncharacterized protein LOC111018707 OS=Momordica charantia OX=3673 GN=LOC111018707 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.6e-28
Identity = 75/97 (77.32%), Postives = 81/97 (83.51%), Query Frame = 0


Query: 8   IGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDTESVVVN 67
           IGVRK RIFPHASSLASIESLSLPLVQEIVLTADI C ECQ KLA+ILSK+NDTESVVVN
Sbjct: 12  IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANILSKINDTESVVVN 71

Query: 68  LLDKKVILTRRSQIP-------SRVSTIKRLFASPCR 98
           LL+KKVILTRR Q+P       S+V+TIKRL  S  R
Sbjct: 72  LLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 108

[Close]

BLAST of IVF0009102 vs. ExPASy TrEMBL
Match: A0A6J1G176 (uncharacterized protein LOC111449743 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.6e-25
Identity = 76/116 (65.52%), Postives = 81/116 (69.83%), Query Frame = 0


Query: 7   GIGVRKQRIFPHASSLASIESLSLPL---------------------------VQEIVLT 66
           GIGVRK +IFPHASSLAS+ESLSLPL                           VQEIV  
Sbjct: 12  GIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFA 71

Query: 67  ADIGCAECQKKLADILSKMNDTESVVVNLLDKKVILTRRSQI-PSRVSTIKRLFAS 95
           ADIGCAECQKKLA+IL+KMNDTESVVVNLLDKKVILTR+ QI  SRVSTIKRL  S
Sbjct: 72  ADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIQTSRVSTIKRLLGS 127

[Close]

BLAST of IVF0009102 vs. NCBI nr
Match: KGN52069.1 (hypothetical protein Csa_009028 [Cucumis sativus])

HSP 1 Score: 173 bits (439), Expect = 3.89e-54
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MAAVVVGIGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMND 60
          M AVVVGIGVRK+RIFPHASSLASIESL+LPLVQEIVLTADIGCAECQKKLA+ILSKMND
Sbjct: 1  MGAVVVGIGVRKKRIFPHASSLASIESLTLPLVQEIVLTADIGCAECQKKLANILSKMND 60

Query: 61 TESVVVNLLDKKVILTRRSQIPSRVSTIKRLFASPCR 97
          TESVVVNLLDKKVILTRRSQIPSRVSTI+RLFASPCR
Sbjct: 61 TESVVVNLLDKKVILTRRSQIPSRVSTIRRLFASPCR 97

[Close]

BLAST of IVF0009102 vs. NCBI nr
Match: XP_038892707.1 (uncharacterized protein LOC120081691 [Benincasa hispida])

HSP 1 Score: 161 bits (408), Expect = 2.02e-49
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 3  AVVVGIGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDTE 62
          A   GIGVRK++IFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLA+ILSKMNDTE
Sbjct: 2  AAAAGIGVRKKKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLANILSKMNDTE 61

Query: 63 SVVVNLLDKKVILTRRSQIPSRVSTIKRLFASPCR 97
          SVVVNLLDKKVILTRR QIPSR+STIKRL  SPCR
Sbjct: 62 SVVVNLLDKKVILTRRLQIPSRISTIKRLLGSPCR 96

[Close]

BLAST of IVF0009102 vs. NCBI nr
Match: XP_022968296.1 (uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima])

HSP 1 Score: 147 bits (371), Expect = 1.17e-43
Identity = 82/97 (84.54%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 2   AAVVVGIGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDT 61
           AA   GIGVRK +IFPHASSLASIESLSLPLVQEIV TADIGCAECQKKLA+ILSKMNDT
Sbjct: 9   AAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFTADIGCAECQKKLANILSKMNDT 68

Query: 62  ESVVVNLLDKKVILTRRSQIPS-RVSTIKRLFASPCR 97
           ESVVVNLLDKKVILTR+ QIPS RVST+KRL  S  R
Sbjct: 69  ESVVVNLLDKKVILTRKLQIPSSRVSTVKRLLGSSFR 105

[Close]

BLAST of IVF0009102 vs. NCBI nr
Match: XP_023542320.1 (uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144 bits (364), Expect = 1.36e-42
Identity = 81/97 (83.51%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 2   AAVVVGIGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDT 61
           AA   GIGVRK +IFPHASSLASIESLSLPLVQEIV  ADIGCAECQKKLA+IL+KMNDT
Sbjct: 9   AAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDT 68

Query: 62  ESVVVNLLDKKVILTRRSQIP-SRVSTIKRLFASPCR 97
           ESVVVNLLDKKVILTR+ QIP SRVSTIKRL  S  R
Sbjct: 69  ESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLGSSFR 105

[Close]

BLAST of IVF0009102 vs. NCBI nr
Match: KAG7013033.1 (hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143 bits (360), Expect = 5.37e-42
Identity = 80/96 (83.33%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 3   AVVVGIGVRKQRIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDTE 62
           A   GIGVRK +IFPHASSLASIESLSLPLVQEIV  ADIGCAECQKKLA+IL+KMNDTE
Sbjct: 9   AAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTE 68

Query: 63  SVVVNLLDKKVILTRRSQIP-SRVSTIKRLFASPCR 97
           SVVVNLLDKKVILTR+ QIP SRVSTIKRL  S  R
Sbjct: 69  SVVVNLLDKKVILTRKLQIPTSRVSTIKRLLGSSFR 104

[Close]

BLAST of IVF0009102 vs. TAIR 10
Match: AT1G68585.1 (unknown protein; Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 7.7e-14
Identity = 42/84 (50.00%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 20  SSLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDTESVVVNLLDKKVILT--- 79
           +SLAS+ SLS+PL+QEIVL+ADI C++CQ+K+ADI+++M +T S++V++L+KKV LT   
Sbjct: 26  TSLASVASLSMPLIQEIVLSADIRCSDCQEKVADIMARMIETYSILVSVLEKKVTLTCTY 85

Query: 80  ---RR------SQIPSRVSTIKRL 92
              RR        +  ++STIKRL
Sbjct: 86  SGDRRVSKSYGEALLCKISTIKRL 109

[Close]

BLAST of IVF0009102 vs. TAIR 10
Match: AT2G35730.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 5.9e-06
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 21 SLASIESLSLPLVQEIVLTADIGCAECQKKLADILSKMNDTESVVVNLLDKKVILTRRSQ 80
          +L   E LSLP  Q I + AD+GC  CQ +++ I+SKM   E  VV+ L KK+++ R   
Sbjct: 10 TLMLCEKLSLPSFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVD-LKKKLVMARGDF 69

Query: 81 IPSRVST 88
           P  VS+
Sbjct: 70 RPRLVSS 75

The following BLAST results are available for this feature:

BLAST of IVF0009102 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009102 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT62	2.9e-40	94.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608570 PE=4 SV=1	[more]
A0A6J1HUG9	2.2e-32	84.54	uncharacterized protein LOC111467567 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G188	1.0e-29	85.39	uncharacterized protein LOC111449743 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DB71	5.6e-28	77.32	uncharacterized protein LOC111018707 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1G176	2.6e-25	65.52	uncharacterized protein LOC111449743 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of IVF0009102 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52069.1	3.89e-54	94.85	hypothetical protein Csa_009028 [Cucumis sativus]	[more]
XP_038892707.1	2.02e-49	89.47	uncharacterized protein LOC120081691 [Benincasa hispida]	[more]
XP_022968296.1	1.17e-43	84.54	uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima]	[more]
XP_023542320.1	1.36e-42	83.51	uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo]	[more]
KAG7013033.1	5.37e-42	83.33	hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0009102 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68585.1	7.7e-14	50.00	unknown protein; Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bact...	[more]
AT2G35730.1	5.9e-06	41.79	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 32..92 e-value: 3.5E-5 score: 26.0
None	No IPR available	PANTHER	PTHR47294:SF4	PROTEIN, PUTATIVE-RELATED	coord: 15..86
None	No IPR available	PANTHER	PTHR47294	OS08G0431150 PROTEIN	coord: 15..86
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 34..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009102.2	IVF0009102.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding