IVF0009076 (gene) Melon (IVF77) v1

Overview
NameIVF0009076
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 19871136 .. 19871390 (-)
RNA-Seq ExpressionIVF0009076
SyntenyIVF0009076
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGACCGGAGAAGGTCCGTTGACGGCGCTATCGTCCGGCGAACAACGGCGTTGCGCGGATGGTCAGCTCGGGCAACGCGGCTAGGCTTGCAACGACAGCTGATGGAAAGCTCGAACGAATGGATGCGCTCCACTCCCGGCACCGAGGATGGAATGGTCCACGGCTGGCTTCGGCTTGGTTGCGTCAGACGACTGGCTGACCGAGACGACGGTGCGGCAATTAGGGTGGCGGGTCGCGGCGGCCGACGATGA

mRNA sequence

ATGAACGACCGGAGAAGGTCCGTTGACGGCGCTATCGTCCGGCGAACAACGGCGTTGCGCGGATGGTCAGCTCGGGCAACGCGGCTAGGCTTGCAACGACAGCTGATGGAAAGCTCGAACGAATGGATGCGCTCCACTCCCGGCACCGAGGATGGAATGGTCCACGGCTGGCTTCGGCTTGGTTGCGTCAGACGACTGGCTGACCGAGACGACGGTGCGGCAATTAGGGTGGCGGGTCGCGGCGGCCGACGATGA

Coding sequence (CDS)

ATGAACGACCGGAGAAGGTCCGTTGACGGCGCTATCGTCCGGCGAACAACGGCGTTGCGCGGATGGTCAGCTCGGGCAACGCGGCTAGGCTTGCAACGACAGCTGATGGAAAGCTCGAACGAATGGATGCGCTCCACTCCCGGCACCGAGGATGGAATGGTCCACGGCTGGCTTCGGCTTGGTTGCGTCAGACGACTGGCTGACCGAGACGACGGTGCGGCAATTAGGGTGGCGGGTCGCGGCGGCCGACGATGA

Protein sequence

MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRLGCVRRLADRDDGAAIRVAGRGGRR
Homology
[Close]
BLAST of IVF0009076 vs. ExPASy TrEMBL
Match: A0A5A7VLK1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00430 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.6e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1   MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL 60
           MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL
Sbjct: 143 MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL 202

Query: 61  GCVRRLADRDDGAAIRVAGRGGRR 85
           GCVRRLADRDDGAAIRVAGRGGRR
Sbjct: 203 GCVRRLADRDDGAAIRVAGRGGRR 226

[Close]
BLAST of IVF0009076 vs. ExPASy TrEMBL
Match: A0A5D3DQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00300 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1   MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL 60
           MNDRRRSVDGAIVRRTTAL GWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL
Sbjct: 143 MNDRRRSVDGAIVRRTTALSGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL 202

Query: 61  GCVRRLADRDDGAAIRVAGRGGRR 85
           GCVRRLADRDDGAAIRVAGRGGRR
Sbjct: 203 GCVRRLADRDDGAAIRVAGRGGRR 226

[Close]
BLAST of IVF0009076 vs. ExPASy TrEMBL
Match: A0A5A7UB87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00240 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.9e-04
Identity = 36/80 (45.00%), Postives = 37/80 (46.25%), Query Frame = 0 

Query: 1   MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL 60
           M+ RRRSVD AI R                                 G EDG V  WLRL
Sbjct: 59  MDGRRRSVDDAIARL--------------------------------GDEDGRVRVWLRL 106

Query: 61  GCVRRLADRDDGAAIRVAGR 81
           GCV RLA RDDGAA RVAGR
Sbjct: 119 GCVGRLATRDDGAAFRVAGR 106

[Close]
BLAST of IVF0009076 vs. NCBI nr
Match: KAA0068090.1 (hypothetical protein E6C27_scaffold238G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 168 bits (426), Expect = 1.19e-50
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1   MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL 60
           MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL
Sbjct: 143 MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL 202

Query: 61  GCVRRLADRDDGAAIRVAGRGGRR 84
           GCVRRLADRDDGAAIRVAGRGGRR
Sbjct: 203 GCVRRLADRDDGAAIRVAGRGGRR 226

[Close]
BLAST of IVF0009076 vs. NCBI nr
Match: TYK26073.1 (hypothetical protein E5676_scaffold1185G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (420), Expect = 9.68e-50
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1   MNDRRRSVDGAIVRRTTALRGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL 60
           MNDRRRSVDGAIVRRTTAL GWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL
Sbjct: 143 MNDRRRSVDGAIVRRTTALSGWSARATRLGLQRQLMESSNEWMRSTPGTEDGMVHGWLRL 202

Query: 61  GCVRRLADRDDGAAIRVAGRGGRR 84
           GCVRRLADRDDGAAIRVAGRGGRR
Sbjct: 203 GCVRRLADRDDGAAIRVAGRGGRR 226

[Close]
BLAST of IVF0009076 vs. NCBI nr
Match: KAA0053203.1 (hypothetical protein E6C27_scaffold1192G00300 [Cucumis melo var. makuwa] >TYK00138.1 hypothetical protein E5676_scaffold2510G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 3.30e-07
Identity = 26/33 (78.79%), Postives = 26/33 (78.79%), Query Frame = 0 

Query: 48  GTEDGMVHGWLRLGCVRRLADRDDGAAIRVAGR 80
           G EDG V  WLRLGCV RLA RDDGAA RVAGR
Sbjct: 74  GDEDGRVRVWLRLGCVGRLATRDDGAAFRVAGR 106

The following BLAST results are available for this feature:
BLAST of IVF0009076 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0009076 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VLK13.6e-39100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DQZ21.8e-3898.81Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UB872.9e-0445.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of IVF0009076 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0068090.11.19e-50100.00hypothetical protein E6C27_scaffold238G00430 [Cucumis melo var. makuwa][more]
TYK26073.19.68e-5098.81hypothetical protein E5676_scaffold1185G00300 [Cucumis melo var. makuwa][more]
KAA0053203.13.30e-0778.79hypothetical protein E6C27_scaffold1192G00300 [Cucumis melo var. makuwa] >TYK001... [more]
BLAST of IVF0009076 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0009076.1IVF0009076.1mRNA