IVF0009073 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATATATTACGACGACGTTGATGACGTGGATGAGGGGGACTCCGCATACGCGATGACCACCGCTACAGAAGACATTCACTACATTGAGACGACAAACGAGTGGTCTCAGTGGTGCGACGAACTAGCTGAATCGATGTTCATAGATTGGCAGTTGCGTAACACTTAG ATGATATATTACGACGACGTTGATGACGTGGATGAGGGGGACTCCGCATACGCGATGACCACCGCTACAGAAGACATTCACTACATTGAGACGACAAACGAGTGGTCTCAGTGGTGCGACGAACTAGCTGAATCGATGTTCATAGATTGGCAGTTGCGTAACACTTAG ATGATATATTACGACGACGTTGATGACGTGGATGAGGGGGACTCCGCATACGCGATGACCACCGCTACAGAAGACATTCACTACATTGAGACGACAAACGAGTGGTCTCAGTGGTGCGACGAACTAGCTGAATCGATGTTCATAGATTGGCAGTTGCGTAACACTTAG MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT Homology
BLAST of IVF0009073 vs. ExPASy TrEMBL
Match: A0A1S4E0Z9 (uncharacterized protein LOC107991461 OS=Cucumis melo OX=3656 GN=LOC107991461 PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.8e-24 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0009073 vs. ExPASy TrEMBL
Match: A0A5D3BDZ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00280 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.0e-18 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of IVF0009073 vs. ExPASy TrEMBL
Match: A0A5D3DAU7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00390 PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0
BLAST of IVF0009073 vs. ExPASy TrEMBL
Match: A0A5A7VK86 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001570 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 7.3e-17 Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of IVF0009073 vs. ExPASy TrEMBL
Match: A0A5D3CUG9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00180 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 7.3e-17 Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of IVF0009073 vs. NCBI nr
Match: XP_016901894.1 (PREDICTED: uncharacterized protein LOC107991461 [Cucumis melo]) HSP 1 Score: 118 bits (296), Expect = 2.49e-32 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0009073 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (249), Expect = 2.02e-26 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of IVF0009073 vs. NCBI nr
Match: KAA0060171.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 94.0 bits (232), Expect = 3.00e-23 Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0
BLAST of IVF0009073 vs. NCBI nr
Match: KAA0035723.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK30822.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 93.6 bits (231), Expect = 4.37e-23 Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of IVF0009073 vs. NCBI nr
Match: TYK04228.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 91.7 bits (226), Expect = 6.56e-23 Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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