IVF0009059 (gene) Melon (IVF77) v1

Overview


Name	IVF0009059
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	zinc finger CCCH domain-containing protein 54
Location	chr07: 21642492 .. 21643142 (+)
RNA-Seq Expression	IVF0009059
Synteny	IVF0009059

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCAAGGGTTTGTTTTTGGGATTAATGACGTGTACGGCCACGAATTCTCCGCCGTGTCACTGCCGGAAGTCACGGTCGGTAACTTAACGGAAAAAGTAGACGACACGGCGGTGTTCAGCACCGACGAGTTTCGGATGTACTCTTACAAGATCCAACGGTGCCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTATGCACACCGTGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCGGCTTTTCGATCGGGGAGCTGTCCGAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTATTGGCTTCACCCGGCTCGGTACCGGACCCGGGCCTGTAATGCCGGCCGATTTTGTCAAAGGAAAGTTTGTTTTTTTGCTCACTCGCCGGAGGAACTCCGGCCTGAAACCAAACACAAGTTTAATTTGAATGCTCAACGGCAGCGTGTGGCGGTGGCTGCCGTTGAAAGTCCGCCGGAGGAAAAGAATGACGGAATTTTGGAAATCCCCGCGAGGGAGAACGGCGGTGGACGGAAAAATGAACGGAGTTTTGGATTTGATGTGTCGGAATTGGAGTTGCCGCATATTGAATGGATATCGGAATTGTTGAAGTAA

mRNA sequence

ATGTTTCAAGGGTTTGTTTTTGGGATTAATGACGTGTACGGCCACGAATTCTCCGCCGTGTCACTGCCGGAAGTCACGGTCGGTAACTTAACGGAAAAAGTAGACGACACGGCGGTGTTCAGCACCGACGAGTTTCGGATGTACTCTTACAAGATCCAACGGTGCCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTATGCACACCGTGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCGGCTTTTCGATCGGGGAGCTGTCCGAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTATTGGCTTCACCCGGCTCGGTACCGGACCCGGGCCTGTAATGCCGGCCGATTTTGTCAAAGGAAAGTTTGTTTTTTTGCTCACTCGCCGGAGGAACTCCGGCCTGAAACCAAACACAAGTTTAATTTGAATGCTCAACGGCAGCGTGTGGCGGTGGCTGCCGTTGAAAGTCCGCCGGAGGAAAAGAATGACGGAATTTTGGAAATCCCCGCGAGGGAGAACGGCGGTGGACGGAAAAATGAACGGAGTTTTGGATTTGATGTGTCGGAATTGGAGTTGCCGCATATTGAATGGATATCGGAATTGTTGAAGTAA

Coding sequence (CDS)

ATGTTTCAAGGGTTTGTTTTTGGGATTAATGACGTGTACGGCCACGAATTCTCCGCCGTGTCACTGCCGGAAGTCACGGTCGGTAACTTAACGGAAAAAGTAGACGACACGGCGGTGTTCAGCACCGACGAGTTTCGGATGTACTCTTACAAGATCCAACGGTGCCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTATGCACACCGTGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCGGCTTTTCGATCGGGGAGCTGTCCGAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTATTGGCTTCACCCGGCTCGGTACCGGACCCGGGCCTGTAATGCCGGCCGATTTTGTCAAAGGAAAGTTTGTTTTTTTGCTCACTCGCCGGAGGAACTCCGGCCTGAAACCAAACACAAGTTTAATTTGAATGCTCAACGGCAGCGTGTGGCGGTGGCTGCCGTTGAAAGTCCGCCGGAGGAAAAGAATGACGGAATTTTGGAAATCCCCGCGAGGGAGAACGGCGGTGGACGGAAAAATGAACGGAGTTTTGGATTTGATGTGTCGGAATTGGAGTTGCCGCATATTGAATGGATATCGGAATTGTTGAAGTAA

Protein sequence

MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK

Homology

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BLAST of IVF0009059 vs. ExPASy Swiss-Prot
Match: O65036 (Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN=TZF6 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.9e-55
Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 36  DTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRS 95
           D A++ +DEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR+
Sbjct: 44  DDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRN 103

Query: 96  GSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-PETKHK 153
           G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR  E KH+
Sbjct: 104 GACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSEGKHR 161

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BLAST of IVF0009059 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.1e-44
Identity = 74/107 (69.16%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 40  FSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           +S D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C 
Sbjct: 75  YSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCK 134

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 147
           KGD CEFAHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR
Sbjct: 135 KGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLR 181

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BLAST of IVF0009059 vs. ExPASy Swiss-Prot
Match: O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.1e-44
Identity = 87/168 (51.79%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 37  TAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSG 96
           T  FS+DEFR+Y +KI+RC R RSHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR G
Sbjct: 83  TDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKG 142

Query: 97  SCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-------PET 156
           SC +GD CEF+HGVFE WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR       P+ 
Sbjct: 143 SCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDL 202

Query: 157 KHKFNLNAQRQRVAVAAVESPPEEK-----NDGILEIPARE---NGGG 190
                L      + V+   SPP E      + G L    R+   NGGG
Sbjct: 203 GFFSGLATSPTSILVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGG 250

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BLAST of IVF0009059 vs. ExPASy Swiss-Prot
Match: Q9LXV4 (Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana OX=3702 GN=At5g12850 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.0e-44
Identity = 78/127 (61.42%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 21  SLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDP 80
           SLP++  G          ++STDEFRM+S+KI+ C R  SHDWTECP+AH GE A+RRDP
Sbjct: 244 SLPDIKSG----------IYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDP 303

Query: 81  RRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH 140
           R+F+YT V CP F+ GSC +GD CE+AHGVFE WLHPA+YRTR C  G  C R+VCFFAH
Sbjct: 304 RKFHYTCVPCPDFKKGSCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAH 360

Query: 141 SPEELRP 148
           + EELRP
Sbjct: 364 ANEELRP 360

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BLAST of IVF0009059 vs. ExPASy Swiss-Prot
Match: P93755 (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=At2g41900 PE=1 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 9.1e-44
Identity = 72/110 (65.45%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 38  AVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGS 97
           ++++TDEFRMYS+K++ C R  SHDWTECP+ H GE A+RRDPR+F+Y+ V CP FR G+
Sbjct: 255 SIYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGA 314

Query: 98  CPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRP 148
           C +GD CE+AHGVFE WLHPA+YRTR C  G  C R+VCFFAH+PEELRP
Sbjct: 315 CRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELRP 364

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BLAST of IVF0009059 vs. ExPASy TrEMBL
Match: A0A5A7TRB5 (Zinc finger CCCH domain-containing protein 54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00410 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.6e-126
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180
           RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180

Query: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 217
           IPARENGGGRKNERSFGFDVSELELPHIEWISELLK
Sbjct: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

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BLAST of IVF0009059 vs. ExPASy TrEMBL
Match: A0A1S3BYP8 (zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC103494870 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.6e-126
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180
           RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180

Query: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 217
           IPARENGGGRKNERSFGFDVSELELPHIEWISELLK
Sbjct: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

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BLAST of IVF0009059 vs. ExPASy TrEMBL
Match: A0A6J1E9W0 (zinc finger CCCH domain-containing protein 54 OS=Cucurbita moschata OX=3662 GN=LOC111430684 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.9e-95
Identity = 165/218 (75.69%), Postives = 186/218 (85.32%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGN--LTEKVDDTAVFSTDEFRMYSYKIQRCPRN 60
           M QGFVFGINDVYGHEF+AV+LPE    N  LT + DDTA+F++DEFRMY++KIQRCP++
Sbjct: 1   MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   R A+AA+E P E KNDG+
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGV 180

Query: 181 LEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 217
            EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 181 SEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

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BLAST of IVF0009059 vs. ExPASy TrEMBL
Match: A0A6J1JDT4 (zinc finger CCCH domain-containing protein 54 OS=Cucurbita maxima OX=3661 GN=LOC111483496 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.0e-95
Identity = 164/218 (75.23%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGN--LTEKVDDTAVFSTDEFRMYSYKIQRCPRN 60
           MFQGFVFGINDVYGHEF+AV+LPE    N  LT + +DTA+F++DEFRMY++KIQRCP++
Sbjct: 1   MFQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTNDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRPETK+K +  A  +R A+AA++ P E KNDG+
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKNKLHFAAPVERAALAALKYPVERKNDGV 180

Query: 181 LEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 217
            EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 181 SEIPVKEISDGLGNERSSELEASESELPHIEWISELLQ 218

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BLAST of IVF0009059 vs. ExPASy TrEMBL
Match: A0A6J1CJI1 (zinc finger CCCH domain-containing protein 54 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011570 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.7e-80
Identity = 150/224 (66.96%), Postives = 175/224 (78.12%), Query Frame = 0


Query: 1   MFQGFVFGIND-VYGHEFSAVSLPEVTVGNLTEKVDD-TAVFSTDEFRMYSYKIQRCPRN 60
           MFQGF  GIN+ V+ H+FS           L E+V+D  AVF +DEFRM++YKIQRCPR 
Sbjct: 2   MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRT 61

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+CP+GDFCE+AHGVFEYWLHPA
Sbjct: 62  RSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPA 121

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAH+PE+LR ETK KF+ NA R RV V AVE+P E KND +
Sbjct: 122 RYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDV 181

Query: 181 LEIPARENG------GGRKNERSFGFDVSELELPHIEWISELLK 217
             I     G        RKN+R+FG++VS+ +LPHI WI ELL+
Sbjct: 182 SNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWIRELLQ 218

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BLAST of IVF0009059 vs. NCBI nr
Match: XP_008454474.1 (PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo] >KAA0044676.1 zinc finger CCCH domain-containing protein 54 [Cucumis melo var. makuwa] >TYK16906.1 zinc finger CCCH domain-containing protein 54 [Cucumis melo var. makuwa])

HSP 1 Score: 462 bits (1188), Expect = 1.76e-164
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180
           RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180

Query: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
           IPARENGGGRKNERSFGFDVSELELPHIEWISELLK
Sbjct: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

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BLAST of IVF0009059 vs. NCBI nr
Match: KGN53171.2 (hypothetical protein Csa_015342 [Cucumis sativus])

HSP 1 Score: 421 bits (1081), Expect = 1.72e-147
Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 3   QGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRSHD 62
            GFVFGINDVYGHEFS VSLPE+TVGNLTEK DDTAVFS+DEFRMYSYKIQRCPRNRSHD
Sbjct: 46  HGFVFGINDVYGHEFSVVSLPELTVGNLTEKTDDTAVFSSDEFRMYSYKIQRCPRNRSHD 105

Query: 63  WTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRT 122
           WTECPYAHRGEKAQRRDPR+FNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRT
Sbjct: 106 WTECPYAHRGEKAQRRDPRQFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRT 165

Query: 123 RACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILEIP 182
           RACNAGRFCQRKVCFFAHSPEELRPETK K + +A +QRVAV A+ESPPEEKNDGILEIP
Sbjct: 166 RACNAGRFCQRKVCFFAHSPEELRPETKQKSSFSAHQQRVAVDAIESPPEEKNDGILEIP 225

Query: 183 ARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
           AR +G GRKNERSFG DV+ELELPHIEWISELLK
Sbjct: 226 ARVSGSGRKNERSFGLDVTELELPHIEWISELLK 259

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BLAST of IVF0009059 vs. NCBI nr
Match: XP_038878131.1 (zinc finger CCCH domain-containing protein 54 [Benincasa hispida])

HSP 1 Score: 390 bits (1001), Expect = 4.16e-136
Identity = 181/216 (83.80%), Postives = 193/216 (89.35%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSAVS+PE+         DDTA+FS+DEFRMY+YKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSVPEI---------DDTAMFSSDEFRMYAYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180
           RTRACNAGRFCQRKVCFFAHSP+ELRPETK KFN NA RQRVAVA VESP EEK DG  E
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPKELRPETKQKFNFNAHRQRVAVADVESPSEEKFDGASE 180

Query: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
           IP R   GGR+ +RSFG +VSEL+LPH+EWISELL+
Sbjct: 181 IPVRGTSGGREKQRSFGLEVSELDLPHVEWISELLQ 207

[Close]

BLAST of IVF0009059 vs. NCBI nr
Match: XP_023553083.1 (zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359 bits (921), Expect = 9.56e-124
Identity = 166/218 (76.15%), Postives = 187/218 (85.78%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGN--LTEKVDDTAVFSTDEFRMYSYKIQRCPRN 60
           M QGFVFGINDVYGHEF+AV+LPE    N  LT + DDTA+F++DEFRMY++KIQRCP++
Sbjct: 1   MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   RVA+AA+E P E KNDG+
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARVALAALEYPVERKNDGV 180

Query: 181 LEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
            EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 181 SEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

[Close]

BLAST of IVF0009059 vs. NCBI nr
Match: XP_022922815.1 (zinc finger CCCH domain-containing protein 54 [Cucurbita moschata])

HSP 1 Score: 357 bits (917), Expect = 3.89e-123
Identity = 165/218 (75.69%), Postives = 186/218 (85.32%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGN--LTEKVDDTAVFSTDEFRMYSYKIQRCPRN 60
           M QGFVFGINDVYGHEF+AV+LPE    N  LT + DDTA+F++DEFRMY++KIQRCP++
Sbjct: 1   MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGI 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   R A+AA+E P E KNDG+
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGV 180

Query: 181 LEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216
            EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 181 SEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

[Close]

BLAST of IVF0009059 vs. TAIR 10
Match: AT5G07500.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 216.1 bits (549), Expect = 2.8e-56
Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 36  DTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRS 95
           D A++ +DEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR+
Sbjct: 44  DDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRN 103

Query: 96  GSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-PETKHK 153
           G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR  E KH+
Sbjct: 104 GACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSEGKHR 161

[Close]

BLAST of IVF0009059 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-45
Identity = 74/107 (69.16%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 40  FSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           +S D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C 
Sbjct: 75  YSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCK 134

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 147
           KGD CEFAHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR
Sbjct: 135 KGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLR 181

[Close]

BLAST of IVF0009059 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.9e-45
Identity = 87/168 (51.79%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 37  TAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSG 96
           T  FS+DEFR+Y +KI+RC R RSHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR G
Sbjct: 83  TDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKG 142

Query: 97  SCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-------PET 156
           SC +GD CEF+HGVFE WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR       P+ 
Sbjct: 143 SCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDL 202

Query: 157 KHKFNLNAQRQRVAVAAVESPPEEK-----NDGILEIPARE---NGGG 190
                L      + V+   SPP E      + G L    R+   NGGG
Sbjct: 203 GFFSGLATSPTSILVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGG 250

[Close]

BLAST of IVF0009059 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.9e-45
Identity = 87/168 (51.79%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 37  TAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSG 96
           T  FS+DEFR+Y +KI+RC R RSHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR G
Sbjct: 83  TDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKG 142

Query: 97  SCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-------PET 156
           SC +GD CEF+HGVFE WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR       P+ 
Sbjct: 143 SCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDL 202

Query: 157 KHKFNLNAQRQRVAVAAVESPPEEK-----NDGILEIPARE---NGGG 190
                L      + V+   SPP E      + G L    R+   NGGG
Sbjct: 203 GFFSGLATSPTSILVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGG 250

[Close]

BLAST of IVF0009059 vs. TAIR 10
Match: AT5G12850.1 (CCCH-type zinc finger protein with ARM repeat domain )

HSP 1 Score: 178.7 bits (452), Expect = 5.0e-45
Identity = 78/127 (61.42%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 21  SLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDP 80
           SLP++  G          ++STDEFRM+S+KI+ C R  SHDWTECP+AH GE A+RRDP
Sbjct: 244 SLPDIKSG----------IYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDP 303

Query: 81  RRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH 140
           R+F+YT V CP F+ GSC +GD CE+AHGVFE WLHPA+YRTR C  G  C R+VCFFAH
Sbjct: 304 RKFHYTCVPCPDFKKGSCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAH 360

Query: 141 SPEELRP 148
           + EELRP
Sbjct: 364 ANEELRP 360

The following BLAST results are available for this feature:

BLAST of IVF0009059 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65036	3.9e-55	78.81	Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M0G2	3.1e-44	69.16	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82307	4.1e-44	51.79	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LXV4	7.0e-44	61.42	Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P93755	9.1e-44	65.45	Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of IVF0009059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRB5	2.6e-126	100.00	Zinc finger CCCH domain-containing protein 54 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BYP8	2.6e-126	100.00	zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1E9W0	6.9e-95	75.69	zinc finger CCCH domain-containing protein 54 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JDT4	9.0e-95	75.23	zinc finger CCCH domain-containing protein 54 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CJI1	3.7e-80	66.96	zinc finger CCCH domain-containing protein 54 isoform X1 OS=Momordica charantia ...	[more]

BLAST of IVF0009059 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454474.1	1.76e-164	100.00	PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo] >KAA0044...	[more]
KGN53171.2	1.72e-147	90.65	hypothetical protein Csa_015342 [Cucumis sativus]	[more]
XP_038878131.1	4.16e-136	83.80	zinc finger CCCH domain-containing protein 54 [Benincasa hispida]	[more]
XP_023553083.1	9.56e-124	76.15	zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo]	[more]
XP_022922815.1	3.89e-123	75.69	zinc finger CCCH domain-containing protein 54 [Cucurbita moschata]	[more]

BLAST of IVF0009059 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07500.1	2.8e-56	78.81	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT4G29190.1	2.2e-45	69.16	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.1	2.9e-45	51.79	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.2	2.9e-45	51.79	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G12850.1	5.0e-45	61.42	CCCH-type zinc finger protein with ARM repeat domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 84..110 e-value: 1.2E-5 score: 34.7 coord: 119..142 e-value: 13.0 score: 7.5
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 88..109 e-value: 1.2E-5 score: 25.1
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 84..111 score: 13.196945
None	No IPR available	GENE3D	4.10.1000.10		coord: 79..153 e-value: 4.0E-8 score: 35.0
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 34..167
None	No IPR available	PANTHER	PTHR14493:SF109	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54	coord: 34..167
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 83..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009059.2	IVF0009059.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009910	negative regulation of flower development
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0006349	regulation of gene expression by genetic imprinting
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031490	chromatin DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding