IVF0009022 (gene) Melon (IVF77) v1

Overview
NameIVF0009022
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 494131 .. 494438 (-)
RNA-Seq ExpressionIVF0009022
SyntenyIVF0009022
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGAATTAACTCCGCCACGTGGAGACTGTCAACCATTTAGATTGGTGTACACGTGGCAAGAGAAGGACGGGGATCTCCAACCACGTGGGCTTCTCATCGTGCGTGTCACCGTCACCTCCAATCTCTTGTCTTCATCGGGTTCTTGCTTTCAGCTTCCGTGACCGGACCAATCGCCGGCTGCCATGCCGACTCTCCGCTGGGTCGTATCGTTGTGGAGAATCGCGTCCCAACAGGACACGTGTGTGGTTGCCTTTTGGTGTGGGGCTTAGAAGGGTGCATTGGACATCATGCACGTGATCAGTAG

mRNA sequence

ATGGGCGAATTAACTCCGCCACGTGGAGACTGTCAACCATTTAGATTGGTGTACACGTGGCAAGAGAAGGACGGGGATCTCCAACCACGTGGGCTTCTCATCGTGCCTTCCGTGACCGGACCAATCGCCGGCTGCCATGCCGACTCTCCGCTGGGTCGTATCGTTGTGGAGAATCGCGTCCCAACAGGACACGTGTGTGGTTGCCTTTTGGTGTGGGGCTTAGAAGGGTGCATTGGACATCATGCACGTGATCAGTAG

Coding sequence (CDS)

ATGGGCGAATTAACTCCGCCACGTGGAGACTGTCAACCATTTAGATTGGTGTACACGTGGCAAGAGAAGGACGGGGATCTCCAACCACGTGGGCTTCTCATCGTGCCTTCCGTGACCGGACCAATCGCCGGCTGCCATGCCGACTCTCCGCTGGGTCGTATCGTTGTGGAGAATCGCGTCCCAACAGGACACGTGTGTGGTTGCCTTTTGGTGTGGGGCTTAGAAGGGTGCATTGGACATCATGCACGTGATCAGTAG

Protein sequence

MGELTPPRGDCQPFRLVYTWQEKDGDLQPRGLLIVPSVTGPIAGCHADSPLGRIVVENRVPTGHVCGCLLVWGLEGCIGHHARDQ
Homology
[Close]
BLAST of IVF0009022 vs. ExPASy TrEMBL
Match: A0A5D3BSW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00650 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.4e-20
Identity = 51/69 (73.91%), Postives = 51/69 (73.91%), Query Frame = 0 

Query: 1  MGELTPPRGDCQPFRLVYTWQEKDGDLQPRGLLIV-----------------PSVTGPIA 53
          MGELTPPRGDCQPFRLVYTWQEKDGDLQPRGLLIV                  SVTGPIA
Sbjct: 6  MGELTPPRGDCQPFRLVYTWQEKDGDLQPRGLLIVRVTVTSKSLVFIGFLLSASVTGPIA 65

[Close]
BLAST of IVF0009022 vs. NCBI nr
Match: TYK02078.1 (hypothetical protein E5676_scaffold680G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 104 bits (259), Expect = 6.38e-27
Identity = 51/69 (73.91%), Postives = 51/69 (73.91%), Query Frame = 0 

Query: 1  MGELTPPRGDCQPFRLVYTWQEKDGDLQPRGLLIV-----------------PSVTGPIA 52
          MGELTPPRGDCQPFRLVYTWQEKDGDLQPRGLLIV                  SVTGPIA
Sbjct: 6  MGELTPPRGDCQPFRLVYTWQEKDGDLQPRGLLIVRVTVTSKSLVFIGFLLSASVTGPIA 65

The following BLAST results are available for this feature:
BLAST of IVF0009022 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0009022 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BSW38.4e-2073.91Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of IVF0009022 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK02078.16.38e-2773.91hypothetical protein E5676_scaffold680G00650 [Cucumis melo var. makuwa][more]
BLAST of IVF0009022 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0009022.1IVF0009022.1mRNA