![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
IVF0008962 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCGTCTAATGCCGTTGCCGGCGTATCTCCCTGACTAACCCTCTCCTCTCACGCCGTGGCCGGCGTTCGGTCGTCTCTCCTTCTCCGTGTCTCCGGCGTTCATCTCTGATCCTCTCTTCTTTTCGGAAGTCTCCGATAGTCGCTCGCTCTCCCTCACCCGTTGCGTTGTTGCCTTGCCGCTGCGATACTTTGTTTTGTACAACTTATCCTCAGTCCAAACCCAAAATTTAGGTTTTTTCTTCGACAAATTGCTCGCTCGGGAGCTCCCACCCCGCCATTGTTAAGGTAAGAAACTTACCTTGTAATCCTTCTTACTTCATCAGTTTTAGGGCTTTAACTTGTGCTTCCAAGCGTTCTAGTTAATGAGTCATTCGAGATTTATCTTCATCTGAATTGAAATTTTCATAGTTTCTTTAGGTTCGTCTAATTTCAGAAAGGTGAAACGATCGATGTTCAATAGCAAAAAGATATTATTTGCCTGTAGTCAAGCTATTGGGAACTGTTCTATACGAAATTTCAATTCTGTTTCTTTTTCTTCTTTACAATTTGAAACGGGTAATCACTATTCTGTTCTTCAGTCCAGTAGTTTTCAGCATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCAATTGGGTTTTGGCCTCGTCGAAGGGCTCAACTATGGTTGGAGAAACTTGGCGCAATTGAACCATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTCGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCAAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGTGCAATTGATAAAATGGTTTATGGATTGCCTTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTAATGGTGATATGAGAAATGCTTCACCATGGTCACAAGTTCCTCGTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGACTTTTATGTTTGGACTCCTAATGGCAGTAGTTTGTTTAGATTGTATCGAGATCCCGAATATTGGGACGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATATGTAGTAAATATGTCATTACAAATCCCCTCATCGAGCTTAAGTCCTTTAGGCCATCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAGACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAATGCACTGCATCTATTGACATTGTTTTCAATGGCTAAGCTTATAGTAAGGAATCTCGGACTCTGAGGTTCAGAACTTGAAGGGACTTCTCGTTAACTTGAAAATTGCCGAATCTAACAATGATATGAATGTTGTCAAACCAAGCACATCTCAAGTTTGACTACTACCCTTTTGGATCCATTTTTGACCTCTTTCCACGTGCTAGGAAAGCTCGGCATATTCGATCATTGCTTAGAGACATACCGAACAACATGCCACACATATGTCAGTTCCAATTCTAACTTCATTGGTGTGTACGAACATGGTAGCAGCATGAAATCTAAAGGGCCATGGGGAAGATAGATAGTCCTTTGGACTTTGTTTGAAGTCTATTGATAATAGAAAAATCTGAACACTCATCCGATTTCTTCAAGAAAACACACAAACAAAGACTAAGCTAATTAAAGGAGGGTACATTTATCACAATCAATATCTCTATCAATTCTTCTTCTCTATTCCAATATCTTAAAGCTATTTTTCATTTATTTGTTGGGTTTGGGAAGAAAATAGAGGACAGCAATTCCTATATTGTATTGTTCAG CTCTCGTCTAATGCCGTTGCCGGCGTATCTCCCTGACTAACCCTCTCCTCTCACGCCGTGGCCGGCGTTCGGTCGTCTCTCCTTCTCCGTGTCTCCGGCGTTCATCTCTGATCCTCTCTTCTTTTCGGAAGTCTCCGATAGTCGCTCGCTCTCCCTCACCCGTTGCGTTGTTGCCTTGCCGCTGCGATACTTTGTTTTGTACAACTTATCCTCAGTCCAAACCCAAAATTTAGGTTTTTTCTTCGACAAATTGCTCGCTCGGGAGCTCCCACCCCGCCATTGTTAAGGTAAGAAACTTACCTTGTAATCCTTCTTACTTCATCAGTTTTAGGGCTTTAACTTGTGCTTCCAAGCGTTCTAGTTAATGAGTCATTCGAGATTTATCTTCATCTGAATTGAAATTTTCATAGTTTCTTTAGGTTCGTCTAATTTCAGAAAGGTGAAACGATCGATGTTCAATAGCAAAAAGATATTATTTGCCTGTAGTCAAGCTATTGGGAACTGTTCTATACGAAATTTCAATTCTGTTTCTTTTTCTTCTTTACAATTTGAAACGGGTAATCACTATTCTGTTCTTCAGTCCAGTAGTTTTCAGCATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCAATTGGGTTTTGGCCTCGTCGAAGGGCTCAACTATGGTTGGAGAAACTTGGCGCAATTGAACCATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTCGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCAAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGTGCAATTGATAAAATGGTTTATGGATTGCCTTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTAATGGTGATATGAGAAATGCTTCACCATGGTCACAAGTTCCTCGTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGACTTTTATGTTTGGACTCCTAATGGCAGTAGTTTGTTTAGATTGTATCGAGATCCCGAATATTGGGACGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATATGTAGTAAATATGTCATTACAAATCCCCTCATCGAGCTTAAGTCCTTTAGGCCATCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAGACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAATGCACTGCATCTATTGACATTGTTTTCAATGGCTAAGCTTATAGTAAGGAATCTCGGACTCTGAGGTTCAGAACTTGAAGGGACTTCTCGTTAACTTGAAAATTGCCGAATCTAACAATGATATGAATGTTGTCAAACCAAGCACATCTCAAGTTTGACTACTACCCTTTTGGATCCATTTTTGACCTCTTTCCACGTGCTAGGAAAGCTCGGCATATTCGATCATTGCTTAGAGACATACCGAACAACATGCCACACATATGTCAGTTCCAATTCTAACTTCATTGGTGTGTACGAACATGGTAGCAGCATGAAATCTAAAGGGCCATGGGGAAGATAGATAGTCCTTTGGACTTTGTTTGAAGTCTATTGATAATAGAAAAATCTGAACACTCATCCGATTTCTTCAAGAAAACACACAAACAAAGACTAAGCTAATTAAAGGAGGGTACATTTATCACAATCAATATCTCTATCAATTCTTCTTCTCTATTCCAATATCTTAAAGCTATTTTTCATTTATTTGTTGGGTTTGGGAAGAAAATAGAGGACAGCAATTCCTATATTGTATTGTTCAG ATGTTCAATAGCAAAAAGATATTATTTGCCTGTAGTCAAGCTATTGGGAACTGTTCTATACGAAATTTCAATTCTGTTTCTTTTTCTTCTTTACAATTTGAAACGGGTAATCACTATTCTGTTCTTCAGTCCAGTAGTTTTCAGCATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCAATTGGGTTTTGGCCTCGTCGAAGGGCTCAACTATGGTTGGAGAAACTTGGCGCAATTGAACCATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTCGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCAAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGTGCAATTGATAAAATGGTTTATGGATTGCCTTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTAATGGTGATATGAGAAATGCTTCACCATGGTCACAAGTTCCTCGTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGACTTTTATGTTTGGACTCCTAATGGCAGTAGTTTGTTTAGATTGTATCGAGATCCCGAATATTGGGACGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATATGTAGTAAATATGTCATTACAAATCCCCTCATCGAGCTTAAGTCCTTTAGGCCATCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAGACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAA MFNSKKILFACSQAIGNCSIRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIEPFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPWSQVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREICSKYVITNPLIELKSFRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT Homology
BLAST of IVF0008962 vs. ExPASy TrEMBL
Match: A0A1S3C4M6 (uncharacterized protein LOC103496427 OS=Cucumis melo OX=3656 GN=LOC103496427 PE=4 SV=1) HSP 1 Score: 631.3 bits (1627), Expect = 2.0e-177 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of IVF0008962 vs. ExPASy TrEMBL
Match: A0A5A7SZ18 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00600 PE=4 SV=1) HSP 1 Score: 631.3 bits (1627), Expect = 2.0e-177 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of IVF0008962 vs. ExPASy TrEMBL
Match: A0A0A0KG47 (YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G405910 PE=4 SV=1) HSP 1 Score: 614.8 bits (1584), Expect = 1.9e-172 Identity = 283/294 (96.26%), Postives = 290/294 (98.64%), Query Frame = 0
BLAST of IVF0008962 vs. ExPASy TrEMBL
Match: A0A0A0K4T5 (YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G302370 PE=4 SV=1) HSP 1 Score: 603.2 bits (1554), Expect = 5.8e-169 Identity = 280/294 (95.24%), Postives = 286/294 (97.28%), Query Frame = 0
BLAST of IVF0008962 vs. ExPASy TrEMBL
Match: A0A6J1J2F9 (uncharacterized protein LOC111480647 OS=Cucurbita maxima OX=3661 GN=LOC111480647 PE=4 SV=1) HSP 1 Score: 538.9 bits (1387), Expect = 1.3e-149 Identity = 256/296 (86.49%), Postives = 270/296 (91.22%), Query Frame = 0
BLAST of IVF0008962 vs. NCBI nr
Match: XP_008456487.1 (PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo] >XP_016901977.1 PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo] >KAA0036472.1 DNA-directed RNA polymerase subunit beta' [Cucumis melo var. makuwa] >TYK00015.1 DNA-directed RNA polymerase subunit beta' [Cucumis melo var. makuwa]) HSP 1 Score: 622 bits (1603), Expect = 3.92e-225 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of IVF0008962 vs. NCBI nr
Match: XP_031742491.1 (uncharacterized protein LOC101207616 [Cucumis sativus] >KGN47829.1 hypothetical protein Csa_003052 [Cucumis sativus]) HSP 1 Score: 605 bits (1560), Expect = 1.41e-218 Identity = 283/294 (96.26%), Postives = 290/294 (98.64%), Query Frame = 0
BLAST of IVF0008962 vs. NCBI nr
Match: XP_011659114.2 (uncharacterized protein LOC101215512 [Cucumis sativus] >KAE8646186.1 hypothetical protein Csa_015911 [Cucumis sativus]) HSP 1 Score: 593 bits (1528), Expect = 1.07e-213 Identity = 279/294 (94.90%), Postives = 286/294 (97.28%), Query Frame = 0
BLAST of IVF0008962 vs. NCBI nr
Match: XP_038900094.1 (uncharacterized protein LOC120087241 [Benincasa hispida] >XP_038900095.1 uncharacterized protein LOC120087241 [Benincasa hispida]) HSP 1 Score: 560 bits (1443), Expect = 9.71e-201 Identity = 266/294 (90.48%), Postives = 278/294 (94.56%), Query Frame = 0
BLAST of IVF0008962 vs. NCBI nr
Match: XP_022981568.1 (uncharacterized protein LOC111480647 [Cucurbita maxima]) HSP 1 Score: 529 bits (1363), Expect = 1.57e-188 Identity = 256/296 (86.49%), Postives = 270/296 (91.22%), Query Frame = 0
BLAST of IVF0008962 vs. TAIR 10
Match: AT1G13810.1 (Restriction endonuclease, type II-like superfamily protein ) HSP 1 Score: 284.6 bits (727), Expect = 8.7e-77 Identity = 132/254 (51.97%), Postives = 169/254 (66.54%), Query Frame = 0
BLAST of IVF0008962 vs. TAIR 10
Match: AT1G67660.1 (Restriction endonuclease, type II-like superfamily protein ) HSP 1 Score: 192.6 bits (488), Expect = 4.5e-49 Identity = 100/253 (39.53%), Postives = 137/253 (54.15%), Query Frame = 0
BLAST of IVF0008962 vs. TAIR 10
Match: AT1G67660.2 (Restriction endonuclease, type II-like superfamily protein ) HSP 1 Score: 192.6 bits (488), Expect = 4.5e-49 Identity = 100/253 (39.53%), Postives = 137/253 (54.15%), Query Frame = 0
BLAST of IVF0008962 vs. TAIR 10
Match: AT1G67660.3 (Restriction endonuclease, type II-like superfamily protein ) HSP 1 Score: 192.6 bits (488), Expect = 4.5e-49 Identity = 100/253 (39.53%), Postives = 137/253 (54.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|