Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCGGACAAGCAAGATAATGTTCCGCTGGTTAGACTATTAAAGAAAGGTTTTGCTTCCAATGTTGCTCCTGCAAAATCCGCTGATCCTACCATATCAGCTCGCTCTCAGGAAAGTTCTTCTTTTGAAGATGTGTTTGTTCCTACACCTAGTCTTCATCATGCATCCAATAAAGAACCTGGACCATCACAACACTCATATTCGGATAGGTCATCGATTTCGAATGATGTTCCTACTCCTAATCGGCATTCAAAACCTGCATCTCTTCCTATTGATGAATTTATTACGATTGAGGAAAGGACTGATGTTTCTGCTGATGAGACCCCTGATGATGAAAATGTTGAACTTGCTAACACTCGTACAACCAATACTGTTGAACTAGATGTTAATAATGATTTTCAACCCGAGACTCAACAATACCCTGAAGTATCTAGGCCAACGGGGAAGAAATTTCAGCAGAACTGGCGTAACATTACCACCAAGACTGGAAGGAAGAAAATTGCCCCAAACATTCCATCTGTCCCCATTAATGGAATATCATTTCACCTTGTGGAAAATGTTCAATGCTCGAAATATGTTGTGTAG
mRNA sequence
ATGGATTCGGACAAGCAAGATAATGTTCCGCTGGTTAGACTATTAAAGAAAGGTTTTGCTTCCAATGTTGCTCCTGCAAAATCCGCTGATCCTACCATATCAGCTCGCTCTCAGGAAAGTTCTTCTTTTGAAGATGTGTTTGTTCCTACACCTAGTCTTCATCATGCATCCAATAAAGAACCTGGACCATCACAACACTCATATTCGGATAGGTCATCGATTTCGAATGATGTTCCTACTCCTAATCGGCATTCAAAACCTGCATCTCTTCCTATTGATGAATTTATTACGATTGAGGAAAGGACTGATGTTTCTGCTGATGAGACCCCTGATGATGAAAATGTTGAACTTGCTAACACTCGTACAACCAATACTGTTGAACTAGATGTTAATAATGATTTTCAACCCGAGACTCAACAATACCCTGAAGTATCTAGGCCAACGGGGAAGAAATTTCAGCAGAACTGGCGTAACATTACCACCAAGACTGGAAGGAAGAAAATTGCCCCAAACATTCCATCTGTCCCCATTAATGGAATATCATTTCACCTTGTGGAAAATGTTCAATGCTCGAAATATGTTGTGTAG
Coding sequence (CDS)
ATGGATTCGGACAAGCAAGATAATGTTCCGCTGGTTAGACTATTAAAGAAAGGTTTTGCTTCCAATGTTGCTCCTGCAAAATCCGCTGATCCTACCATATCAGCTCGCTCTCAGGAAAGTTCTTCTTTTGAAGATGTGTTTGTTCCTACACCTAGTCTTCATCATGCATCCAATAAAGAACCTGGACCATCACAACACTCATATTCGGATAGGTCATCGATTTCGAATGATGTTCCTACTCCTAATCGGCATTCAAAACCTGCATCTCTTCCTATTGATGAATTTATTACGATTGAGGAAAGGACTGATGTTTCTGCTGATGAGACCCCTGATGATGAAAATGTTGAACTTGCTAACACTCGTACAACCAATACTGTTGAACTAGATGTTAATAATGATTTTCAACCCGAGACTCAACAATACCCTGAAGTATCTAGGCCAACGGGGAAGAAATTTCAGCAGAACTGGCGTAACATTACCACCAAGACTGGAAGGAAGAAAATTGCCCCAAACATTCCATCTGTCCCCATTAATGGAATATCATTTCACCTTGTGGAAAATGTTCAATGCTCGAAATATGTTGTGTAG
Protein sequence
MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKEPGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANTRTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGISFHLVENVQCSKYVV
Homology
BLAST of IVF0008961 vs. ExPASy TrEMBL
Match:
A0A5A7V2P0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1836G00020 PE=4 SV=1)
HSP 1 Score: 382.9 bits (982), Expect = 8.1e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE
Sbjct: 64 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 123
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 120
PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT
Sbjct: 124 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 183
Query: 121 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI 180
RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI
Sbjct: 184 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI 243
Query: 181 SFHLVENVQCSKYVV 196
SFHLVENVQCSKYVV
Sbjct: 244 SFHLVENVQCSKYVV 258
BLAST of IVF0008961 vs. ExPASy TrEMBL
Match:
A0A1S3BQA7 (uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=4 SV=1)
HSP 1 Score: 367.1 bits (941), Expect = 4.6e-98
Identity = 187/188 (99.47%), Postives = 188/188 (100.00%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE
Sbjct: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 120
PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT
Sbjct: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 120
Query: 121 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI 180
RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI
Sbjct: 121 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI 180
Query: 181 SFHLVENV 189
SFHLVEN+
Sbjct: 181 SFHLVENL 188
BLAST of IVF0008961 vs. ExPASy TrEMBL
Match:
A0A5A7SM94 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00110 PE=4 SV=1)
HSP 1 Score: 201.1 bits (510), Expect = 4.4e-48
Identity = 123/196 (62.76%), Postives = 133/196 (67.86%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MDSD+Q +VPL RLLKKGF NVA KS +P ISARSQESSS EDVF+PTP L+HAS++E
Sbjct: 160 MDSDEQYDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETP-DDENVELAN 120
P PSQHS I NDVPT ETP DDENV+ N
Sbjct: 220 PSPSQHS----PPIRNDVPTV--------------------------ETPIDDENVDPTN 279
Query: 121 TRTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPING 180
T TN VE DV +DFQ ETQQ P VSRP GKKFQQN RNITTKTGRKKI NIPSVPI+G
Sbjct: 280 TDATNIVEPDVYDDFQLETQQSPGVSRPKGKKFQQNRRNITTKTGRKKIPLNIPSVPIDG 325
Query: 181 ISFHLVENVQCSKYVV 196
ISFHL ENVQ KYVV
Sbjct: 340 ISFHLEENVQRWKYVV 325
BLAST of IVF0008961 vs. ExPASy TrEMBL
Match:
A0A5D3CC65 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00040 PE=4 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 3.7e-47
Identity = 119/188 (63.30%), Postives = 130/188 (69.15%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MDSD+QD+VPL RLLKKGF NVA KS +P ISARSQESSS EDVF+PTP L+HAS++E
Sbjct: 160 MDSDEQDDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETP-DDENVELAN 120
PGPSQHS I NDVP A ETP DDENV+ N
Sbjct: 220 PGPSQHS----PPIRNDVP--------------------------AVETPIDDENVDPTN 279
Query: 121 TRTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPING 180
T TN VE DV++DFQ ETQQ EVSRP GKKFQQN RNITTKTGRKKI NIPSVPI+G
Sbjct: 280 TDATNIVEPDVHDDFQLETQQSSEVSRPKGKKFQQNRRNITTKTGRKKIPLNIPSVPIDG 317
Query: 181 ISFHLVEN 188
ISFHL EN
Sbjct: 340 ISFHLEEN 317
BLAST of IVF0008961 vs. ExPASy TrEMBL
Match:
A0A5A7T103 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold852G00020 PE=4 SV=1)
HSP 1 Score: 185.7 bits (470), Expect = 1.9e-43
Identity = 111/196 (56.63%), Postives = 129/196 (65.82%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MDS+ D++PL RLLKK S+V PAK DP IS S++ SS EDVFVPTP+
Sbjct: 66 MDSESLDDIPLARLLKKSSVSDVTPAKPTDPIISVHSKKRSSSEDVFVPTPA-------- 125
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPD-DENVELAN 120
+V T N H +PA + DE IT E RT VSADE PD D+ V+LAN
Sbjct: 126 ----------------NVTTSNPHFEPAPVSGDESITTEGRTGVSADEAPDHDKGVKLAN 185
Query: 121 TRTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPING 180
T TTNT DV+ND QPETQQ+PEV RPT KFQ N RNI+TKT RKKI PNIPS+PI+G
Sbjct: 186 TSTTNT---DVHNDSQPETQQFPEVPRPTRNKFQSNQRNISTKTRRKKIPPNIPSIPIDG 234
Query: 181 ISFHLVENVQCSKYVV 196
ISFHL EN+Q KYVV
Sbjct: 246 ISFHLEENIQRWKYVV 234
BLAST of IVF0008961 vs. NCBI nr
Match:
KAA0060145.1 (uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK19510.1 uncharacterized protein E5676_scaffold1836G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 380 bits (976), Expect = 7.03e-132
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE
Sbjct: 64 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 123
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 120
PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT
Sbjct: 124 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 183
Query: 121 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI 180
RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI
Sbjct: 184 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI 243
Query: 181 SFHLVENVQCSKYVV 195
SFHLVENVQCSKYVV
Sbjct: 244 SFHLVENVQCSKYVV 258
BLAST of IVF0008961 vs. NCBI nr
Match:
XP_008450465.1 (PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo])
HSP 1 Score: 364 bits (935), Expect = 7.33e-124
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE
Sbjct: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 120
PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT
Sbjct: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 120
Query: 121 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI 180
RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI
Sbjct: 121 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI 180
Query: 181 SFHLVEN 187
SFHLVEN
Sbjct: 181 SFHLVEN 187
BLAST of IVF0008961 vs. NCBI nr
Match:
KAA0031748.1 (uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 198 bits (504), Expect = 1.09e-56
Identity = 122/195 (62.56%), Postives = 132/195 (67.69%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MDSD+Q +VPL RLLKKGF NVA KS +P ISARSQESSS EDVF+PTP L+HAS++E
Sbjct: 160 MDSDEQYDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 120
P PSQHS I NDVPT PID DENV+ NT
Sbjct: 220 PSPSQHS----PPIRNDVPT-------VETPID------------------DENVDPTNT 279
Query: 121 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPINGI 180
TN VE DV +DFQ ETQQ P VSRP GKKFQQN RNITTKTGRKKI NIPSVPI+GI
Sbjct: 280 DATNIVEPDVYDDFQLETQQSPGVSRPKGKKFQQNRRNITTKTGRKKIPLNIPSVPIDGI 325
Query: 181 SFHLVENVQCSKYVV 195
SFHL ENVQ KYVV
Sbjct: 340 SFHLEENVQRWKYVV 325
BLAST of IVF0008961 vs. NCBI nr
Match:
TYK08882.1 (uncharacterized protein E5676_scaffold1411G00040 [Cucumis melo var. makuwa])
HSP 1 Score: 196 bits (499), Expect = 4.51e-56
Identity = 119/188 (63.30%), Postives = 130/188 (69.15%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MDSD+QD+VPL RLLKKGF NVA KS +P ISARSQESSS EDVF+PTP L+HAS++E
Sbjct: 160 MDSDEQDDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETP-DDENVELAN 120
PGPSQH S PI R DV A ETP DDENV+ N
Sbjct: 220 PGPSQH----------------------SPPI--------RNDVPAVETPIDDENVDPTN 279
Query: 121 TRTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPING 180
T TN VE DV++DFQ ETQQ EVSRP GKKFQQN RNITTKTGRKKI NIPSVPI+G
Sbjct: 280 TDATNIVEPDVHDDFQLETQQSSEVSRPKGKKFQQNRRNITTKTGRKKIPLNIPSVPIDG 317
Query: 181 ISFHLVEN 187
ISFHL EN
Sbjct: 340 ISFHLEEN 317
BLAST of IVF0008961 vs. NCBI nr
Match:
KAA0041887.1 (uncharacterized protein E6C27_scaffold67G002840 [Cucumis melo var. makuwa])
HSP 1 Score: 182 bits (461), Expect = 6.99e-55
Identity = 114/190 (60.00%), Postives = 129/190 (67.89%), Query Frame = 0
Query: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
MD D+QD+V L RLLKK F NVA AKSAD ISARS ESSS +DVF+PTP
Sbjct: 1 MDLDEQDDVLLARLLKKVFVFNVAFAKSADSVISARSWESSSSKDVFIPTP--------- 60
Query: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETP-DDENVELAN 120
+DV +PN HSK A +P+DEF E R DVS DET +DENVE N
Sbjct: 61 ---------------DDVTSPNPHSKLAPVPVDEFTETEGRIDVSDDETSVNDENVEPTN 120
Query: 121 TRTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQQNWRNITTKTGRKKIAPNIPSVPING 180
+ TTNTVE +V+NDFQ TQQ P+VSR GKKFQQN RNITTKTGRKKI NIPSVPI+
Sbjct: 121 SGTTNTVEPNVHNDFQLGTQQSPKVSRRMGKKFQQNRRNITTKTGRKKIPRNIPSVPIDE 166
Query: 181 ISFHLVENVQ 189
ISF+L ENVQ
Sbjct: 181 ISFYLEENVQ 166
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V2P0 | 8.1e-103 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BQA7 | 4.6e-98 | 99.47 | uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=... | [more] |
A0A5A7SM94 | 4.4e-48 | 62.76 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CC65 | 3.7e-47 | 63.30 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T103 | 1.9e-43 | 56.63 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0060145.1 | 7.03e-132 | 100.00 | uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK1... | [more] |
XP_008450465.1 | 7.33e-124 | 100.00 | PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo] | [more] |
KAA0031748.1 | 1.09e-56 | 62.56 | uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa] | [more] |
TYK08882.1 | 4.51e-56 | 63.30 | uncharacterized protein E5676_scaffold1411G00040 [Cucumis melo var. makuwa] | [more] |
KAA0041887.1 | 6.99e-55 | 60.00 | uncharacterized protein E6C27_scaffold67G002840 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |