IVF0008940 (gene) Melon (IVF77) v1

Overview
NameIVF0008940
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr09: 3893524 .. 3895410 (+)
RNA-Seq ExpressionIVF0008940
SyntenyIVF0008940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCGAACTACAGCTTCCAATCTTCCCAAACTCTCACAATCCTTCTTCTTCCTCTCTTCATTCTCCAAATCAACGTTATCTTCTTCTTCATCCTCGACATTTTTGCAATCAATCCCTGAATCCGAAGCTAAATCAATCGTCAACCCTCTTTACCATTTTCTTCCACAAAACCAAAACCCCTTCAATATTGTTGAACTTGTCTCTTTGCATCTTAAAACGAACAACCCCAGGTTAGCTCTTCTTCAAGCCAATATTAAAGGGCTTATTCCTTACTTGGGTCATTGTCAAATCTCCAAGATTTTATTGAGGTGCCAATCTAATTTCGTCTCTGCGCTTGCTTTTTTCAATTGGGTTAAATATGATTTGGATATTAGACTTAATTCTCACAATTATTGCCTAATTATCCACATTTTGGCTTGGTCTCGACAATTTCCTTTAGCGATGAAGTTGTTGTCTGAATTGATTGAGTTGTCTAAAGATGTCTCAAGTAGTGAGGATGTTTTTCAGAATTTGGTATTGTGCACTGAGCACTGTAATTGGAACCCTGTTATCTTCGAGATGCTAATTAAGGCATATGTGAAGTTGGATTTGATTCATGAAAGTTATTGGAGCTTTAAGAGGATGGTGAAATGGGTTTTGTCCCAAGCGTTATTGCTTGTAATTGTATTCTACATGGCCTGGCGAAGATGAAGTCTGATGGCCAATGTTGGGAGCTTTATGAAGAGATGGGGAGGATTGGAGTTCACTCAAATGCATATACTTTAATATTTTGACTTATGTTCTGTGTAGAGATGGGGACGTGAATAAGATTAACGAGTTCTTGGAAAAGATGGAAGAGGAGGGGTTTGATCCTGATGTTGTGACTTACAATACTTTGATCGATAGCTATTGCAGAAGAGGTAGATTAGATGATGCATTTTACTTGTATAGGATAATGTATAGGAGAAGTGTGATGCCTGATCTTGTTTCATATACTTCCTTGATGAGGGGTCTTTGTAGGTTAGGAAGGGTAAGAGAAGCCCATCAGCTATTTCATCGAATGATTGACCGAGGAATGGATCCAGATGTTGTGTCGTACAATACGCTAATTGGTGCATATTGTAAGGATGGAATGCTGCAAGAGGCAAGATCATTGCTACACGATATGATCGGAATTGGTATTCACCCAGATAATTTCACTTGTAGGATTTTGGTGGAAGGATATGGAAGAGAAGGTAGGTTGATCTCGGCTTTGAATTTGGTTGTAGAGATTCAGAAACTTGGAGTCACCATTGCTCACGATATATACAAGTATCTTATCATATCATTGTGTCAGGAAGATCGTCCATTCGCAGCTAAAAGTCTTCTCGAAAGAATTCTTGAGGACAGATTCCAACCTGATTCTGATATCTACAATAAGCTTATTGAATCTTTCTGTAGAAGTAATAATGTGTCTGAGGCACTACTTCTGAAATCGGAAATGATAACAGGAATTTCAAACCTACCATTTATACATATAAGTCTCTCATACACTGTATGTGTGAAATCAATAGAAGTGTAGATGGTGAAGGTCTAATGGAGGAAATGGTTGAATCTGAAGTGCTTCCAGATCATGAAATATGTAGAGCATTGGTAAACGGATATTGCAAAGAAGGCAATGCTGATAAAGCAGAATCATTATTGGTCTCATTTGCCAAAGATTTTCAGTTCTTTGACTCTGAAAGTTTCAATTCTCTGGTTAAAGTTTACTGTGATATGGGTAATGAAACAAAGTTGATGGAGCTGCAAACTCGAATGTTAAAAGCAGGGTTTCTTCCAAATAACTTAACATGTCAATACATTATCCATGGACTTTGGAAATTCACGAGACTCAACGAGCAGAGAGTTCAAGCAGTAGTGGTATGA

mRNA sequence

ATGCTTCGAACTACAGCTTCCAATCTTCCCAAACTCTCACAATCCTTCTTCTTCCTCTCTTCATTCTCCAAATCAACGTTATCTTCTTCTTCATCCTCGACATTTTTGCAATCAATCCCTGAATCCGAAGCTAAATCAATCGTCAACCCTCTTTACCATTTTCTTCCACAAAACCAAAACCCCTTCAATATTGTTGAACTTGTCTCTTTGCATCTTAAAACGAACAACCCCAGGTTAGCTCTTCTTCAAGCCAATATTAAAGGGCTTATTCCTTACTTGGGTCATTGTCAAATCTCCAAGATTTTATTGAGGTGCCAATCTAATTTCGTCTCTGCGCTTGCTTTTTTCAATTGGGTTAAATATGATTTGGATATTAGACTTAATTCTCACAATTATTGCCTAATTATCCACATTTTGGCTTGGTCTCGACAATTTCCTTTAGCGATGAAGTTGTTGTCTGAATTGATTGAGTTGTCTAAAGATGTCTCAAGTAGTGAGGATGTTTTTCAGAATTTGGTATTGTGCACTGAGCACTGTAATTGGAACCCTGTTATCTTCGAGATGCTAATTAAGGCATATGTGAAGTTGGATTTGATTCATGAAAGTTATTGGAGCTTTAAGAGGATGGTGAAATGGGTTTTGTCCCAAGCAGATGGGGAGGATTGGAGTTCACTCAAATGCATATACTTTAATATTTTGACTTATGTTCTGTGTAGAGATGGGGACGTGAATAAGATTAACGAGTTCTTGGAAAAGATGGAAGAGGAGGGGTTTGATCCTGATGTTGTGACTTACAATACTTTGATCGATAGCTATTGCAGAAGAGGTAGATTAGATGATGCATTTTACTTGTATAGGATAATGTATAGGAGAAGTGTGATGCCTGATCTTGTTTCATATACTTCCTTGATGAGGGGTCTTTGTAGGTTAGGAAGGGTAAGAGAAGCCCATCAGCTATTTCATCGAATGATTGACCGAGGAATGGATCCAGATGTTGTGTCGTACAATACGCTAATTGGTGCATATTGTAAGGATGGAATGCTGCAAGAGGCAAGATCATTGCTACACGATATGATCGGAATTGGTATTCACCCAGATAATTTCACTTGTAGGATTTTGGTGGAAGGATATGGAAGAGAAGGTAGGTTGATCTCGGCTTTGAATTTGGTTGTAGAGATTCAGAAACTTGGAGTCACCATTGCTCACGATATATACAAGTATCTTATCATATCATTGTGTCAGGAAGATCGTCCATTCGCAGCTAAAAGTCTTCTCGAAAGAATTCTTGAGGACAGATTCCAACCTGATTCTGATATCTACAATAAGCTTATTGAATCTTTCTGTAGAAGTAATAATGTGAATTTCAAACCTACCATTTATACATATAAGTCTCTCATACACTGTATGTGTGAAATCAATAGAAGTGTAGATGGTGAAGGTCTAATGGAGGAAATGGTTGAATCTGAAGTGCTTCCAGATCATGAAATATGTAGAGCATTGGTAAACGGATATTGCAAAGAAGGCAATGCTGATAAAGCAGAATCATTATTGGTCTCATTTGCCAAAGATTTTCAGTTCTTTGACTCTGAAAGTTTCAATTCTCTGGTTAAAGTTTACTGTGATATGGGTAATGAAACAAAGTTGATGGAGCTGCAAACTCGAATGTTAAAAGCAGGGTTTCTTCCAAATAACTTAACATGTCAATACATTATCCATGGACTTTGGAAATTCACGAGACTCAACGAGCAGAGAGTTCAAGCAGTAGTGGTATGA

Coding sequence (CDS)

ATGCTTCGAACTACAGCTTCCAATCTTCCCAAACTCTCACAATCCTTCTTCTTCCTCTCTTCATTCTCCAAATCAACGTTATCTTCTTCTTCATCCTCGACATTTTTGCAATCAATCCCTGAATCCGAAGCTAAATCAATCGTCAACCCTCTTTACCATTTTCTTCCACAAAACCAAAACCCCTTCAATATTGTTGAACTTGTCTCTTTGCATCTTAAAACGAACAACCCCAGGTTAGCTCTTCTTCAAGCCAATATTAAAGGGCTTATTCCTTACTTGGGTCATTGTCAAATCTCCAAGATTTTATTGAGGTGCCAATCTAATTTCGTCTCTGCGCTTGCTTTTTTCAATTGGGTTAAATATGATTTGGATATTAGACTTAATTCTCACAATTATTGCCTAATTATCCACATTTTGGCTTGGTCTCGACAATTTCCTTTAGCGATGAAGTTGTTGTCTGAATTGATTGAGTTGTCTAAAGATGTCTCAAGTAGTGAGGATGTTTTTCAGAATTTGGTATTGTGCACTGAGCACTGTAATTGGAACCCTGTTATCTTCGAGATGCTAATTAAGGCATATGTGAAGTTGGATTTGATTCATGAAAGTTATTGGAGCTTTAAGAGGATGGTGAAATGGGTTTTGTCCCAAGCAGATGGGGAGGATTGGAGTTCACTCAAATGCATATACTTTAATATTTTGACTTATGTTCTGTGTAGAGATGGGGACGTGAATAAGATTAACGAGTTCTTGGAAAAGATGGAAGAGGAGGGGTTTGATCCTGATGTTGTGACTTACAATACTTTGATCGATAGCTATTGCAGAAGAGGTAGATTAGATGATGCATTTTACTTGTATAGGATAATGTATAGGAGAAGTGTGATGCCTGATCTTGTTTCATATACTTCCTTGATGAGGGGTCTTTGTAGGTTAGGAAGGGTAAGAGAAGCCCATCAGCTATTTCATCGAATGATTGACCGAGGAATGGATCCAGATGTTGTGTCGTACAATACGCTAATTGGTGCATATTGTAAGGATGGAATGCTGCAAGAGGCAAGATCATTGCTACACGATATGATCGGAATTGGTATTCACCCAGATAATTTCACTTGTAGGATTTTGGTGGAAGGATATGGAAGAGAAGGTAGGTTGATCTCGGCTTTGAATTTGGTTGTAGAGATTCAGAAACTTGGAGTCACCATTGCTCACGATATATACAAGTATCTTATCATATCATTGTGTCAGGAAGATCGTCCATTCGCAGCTAAAAGTCTTCTCGAAAGAATTCTTGAGGACAGATTCCAACCTGATTCTGATATCTACAATAAGCTTATTGAATCTTTCTGTAGAAGTAATAATGTGAATTTCAAACCTACCATTTATACATATAAGTCTCTCATACACTGTATGTGTGAAATCAATAGAAGTGTAGATGGTGAAGGTCTAATGGAGGAAATGGTTGAATCTGAAGTGCTTCCAGATCATGAAATATGTAGAGCATTGGTAAACGGATATTGCAAAGAAGGCAATGCTGATAAAGCAGAATCATTATTGGTCTCATTTGCCAAAGATTTTCAGTTCTTTGACTCTGAAAGTTTCAATTCTCTGGTTAAAGTTTACTGTGATATGGGTAATGAAACAAAGTTGATGGAGCTGCAAACTCGAATGTTAAAAGCAGGGTTTCTTCCAAATAACTTAACATGTCAATACATTATCCATGGACTTTGGAAATTCACGAGACTCAACGAGCAGAGAGTTCAAGCAGTAGTGGTATGA

Protein sequence

MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQNPFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVKYDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKRMVKWVLSQADGEDWSSLKCIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCRRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVSYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNVNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFLPNNLTCQYIIHGLWKFTRLNEQRVQAVVV
Homology
BLAST of IVF0008940 vs. ExPASy Swiss-Prot
Match: Q9FND8 (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX=3702 GN=At5g40400 PE=2 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 5.4e-155
Identity = 298/609 (48.93%), Postives = 404/609 (66.34%), Query Frame = 0

Query: 9   LPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQNPFNIVELV 68
           +  L  +  F SS+S S +   S      +IP    K I+NPLY+ LPQ+QNP  IV+++
Sbjct: 1   MKNLVSNLRFFSSYSSSIVPRCS------NIP----KPILNPLYNLLPQSQNPSKIVDVI 60

Query: 69  SLHLKTNNPRLAL--LQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVKYDLDIR 128
              L  ++  + L  L+  +K LIP+LG+ +IS++LLR QS+   A+ FF WVK+DL  R
Sbjct: 61  CSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKR 120

Query: 129 LNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIF 188
            N  NYCL++HIL  S++FPLAM+ L ELIEL+       DVF+ LV  T+ CNW+PV+F
Sbjct: 121 PNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSK-KEEVDVFRVLVSATDECNWDPVVF 180

Query: 189 EMLIKAYVKLDLIHESYWSFK---------------RMVKWVLSQADGED-WS--SLKC- 248
           +ML+K Y+KL L+ E +  F+                ++  +L     ED W   S+ C 
Sbjct: 181 DMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCR 240

Query: 249 -------IYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCRRGRLDD 308
                    FNILT V C D +  ++++FLEKMEEEGF+PD+VTYNTL+ SYCRRGRL +
Sbjct: 241 VGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKE 300

Query: 309 AFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVSYNTLIG 368
           AFYLY+IMYRR V+PDLV+YTSL++GLC+ GRVREAHQ FHRM+DRG+ PD +SYNTLI 
Sbjct: 301 AFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIY 360

Query: 369 AYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQKLGVTI 428
           AYCK+GM+Q+++ LLH+M+G  + PD FTC+++VEG+ REGRL+SA+N VVE+++L V I
Sbjct: 361 AYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDI 420

Query: 429 AHDIYKYLIISLCQEDRPFAAKSLLERILEDR-FQPDSDIYNKLIESFCRSN-------- 488
             ++  +LI+SLCQE +PFAAK LL+RI+E+   +   + YN LIES  R +        
Sbjct: 421 PFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVL 480

Query: 489 -----NVNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALVNGYCK 548
                N N      TY++LI C+C I R+ + E LM EM +SEV PD  IC ALV GYCK
Sbjct: 481 KGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCK 540

Query: 549 EGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMG-NETKLMELQTRMLKAGFLPNNL 575
           E + DKAE LL  FA +F+ FD ES+NSLVK  C+ G    K +ELQ RM + GF+PN L
Sbjct: 541 ELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRL 598

BLAST of IVF0008940 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.0e-49
Identity = 145/596 (24.33%), Postives = 261/596 (43.79%), Query Frame = 0

Query: 70  LHLKTNNPRLALLQANIKGLIPYLGHCQISK-----ILLRCQSNFVSALAFFNWVKYDLD 129
           +H  TN  +L   +   + L PY   C+        +L++ + ++   L FF+W +   D
Sbjct: 59  VHQITNVIKLRRAEPLRRSLKPY--ECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRD 118

Query: 130 IRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSK-DVSSSEDVFQNLVLCTEHCNW-- 189
             L S   C++IH+   S+   +A  L+S   E  K +V+ S   F +L++ T + +W  
Sbjct: 119 SNLES--LCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYT-YKDWGS 178

Query: 190 NPVIFEMLIKAYVKLDLIHESYWSFKRMVKW-----------VLSQADGEDWSSLKCIY- 249
           +P +F++  +  V   L+ E+   F++M+ +            L++   + + +   I  
Sbjct: 179 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 238

Query: 250 ---------------FNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 309
                          +NI+ + +C+ G + + +  L  ME +G+ PDV++Y+T+++ YCR
Sbjct: 239 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 298

Query: 310 RGRLDDAFYLYRI-----------------------------------MYRRSVMPDLVS 369
            G LD  + L  +                                   M R+ ++PD V 
Sbjct: 299 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 358

Query: 370 YTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVSYNTLIGAYCKDGMLQEARSLLHDMI 429
           YT+L+ G C+ G +R A + F+ M  R + PDV++Y  +I  +C+ G + EA  L H+M 
Sbjct: 359 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 418

Query: 430 GIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQKLGVTIAHDIYKYLIISLCQEDRPF 489
             G+ PD+ T   L+ GY + G +  A  +   + + G +     Y  LI  LC+E    
Sbjct: 419 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 478

Query: 490 AAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV-------------NFKPTIYTYKSLI 549
           +A  LL  + +   QP+   YN ++   C+S N+                    TY +L+
Sbjct: 479 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 538

Query: 550 HCMCEINRSVDGEGLMEEMVESEVLPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQF 583
              C+       + +++EM+   + P       L+NG+C  G  +  E LL         
Sbjct: 539 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 598

BLAST of IVF0008940 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.0e-49
Identity = 138/532 (25.94%), Postives = 241/532 (45.30%), Query Frame = 0

Query: 99  SKILLRCQSNFVSALAFFNWVKYDLDIRLNSHNY------CLIIHILAWSRQFPLAMKLL 158
           S +LL+ Q++    L F NW         N H +      C+ +HIL   + +  A  L 
Sbjct: 52  SNLLLKSQNDQALILKFLNWA--------NPHQFFTLRCKCITLHILTKFKLYKTAQILA 111

Query: 159 SELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHES---------- 218
            ++   + D   +  VF++L    + C     +F++++K+Y +L LI ++          
Sbjct: 112 EDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAH 171

Query: 219 -----YWSFKRMV------KWVLSQADG------EDWSSLKCIYFNILTYVLCRDGDVNK 278
                  S+  ++      K  +S A+       E   S     +NIL    C  G+++ 
Sbjct: 172 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 231

Query: 279 INEFLEKMEEEGFDPDVVTYNTLIDSYCRRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMR 338
                +KME +G  P+VVTYNTLID YC+  ++DD F L R M  + + P+L+SY  ++ 
Sbjct: 232 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 291

Query: 339 GLCRLGRVREAHQLFHRMIDRGMDPDVVSYNTLIGAYCKDGMLQEARSLLHDMIGIGIHP 398
           GLCR GR++E   +   M  RG   D V+YNTLI  YCK+G   +A  +  +M+  G+ P
Sbjct: 292 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 351

Query: 399 DNFTCRILVEGYGREGRLISALNLVVEIQKLGVTIAHDIYKYLIISLCQEDRPFAAKSLL 458
              T   L+    + G +  A+  + +++  G+      Y  L+    Q+     A  +L
Sbjct: 352 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 411

Query: 459 ERILEDRFQPDSDIYNKLIESFCRSNNV-------------NFKPTIYTYKSLIHCMCEI 518
             + ++ F P    YN LI   C +  +                P + +Y +++   C  
Sbjct: 412 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 471

Query: 519 NRSVDGEGLMEEMVESEVLPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESF 578
               +   +  EMVE  + PD     +L+ G+C++    +A  L     +     D  ++
Sbjct: 472 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 531

Query: 579 NSLVKVYCDMGNETKLMELQTRMLKAGFLPNNLTCQYIIHGLWKFTRLNEQR 585
            +L+  YC  G+  K ++L   M++ G LP+ +T   +I+GL K +R  E +
Sbjct: 532 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575

BLAST of IVF0008940 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 4.4e-48
Identity = 135/503 (26.84%), Postives = 227/503 (45.13%), Query Frame = 0

Query: 112 ALAFFNWVKYDLDIRLNS--HNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVF 171
           AL F  WV     +  +      C+  HIL  +R +  A  +L EL  +S     S  VF
Sbjct: 53  ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS---GKSSFVF 112

Query: 172 QNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKRMVKWVLSQA------------ 231
             L+     CN NP ++++LI+ Y++  +I +S   F+ M  +  + +            
Sbjct: 113 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 172

Query: 232 -DGED---WSSLK----------CIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVV 291
             GED   WS LK             FNIL  VLC +G   K +  ++KME+ G+ P +V
Sbjct: 173 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 232

Query: 292 TYNTLIDSYCRRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRM 351
           TYNT++  YC++GR   A  L   M  + V  D+ +Y  L+  LCR  R+ + + L   M
Sbjct: 233 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 292

Query: 352 IDRGMDPDVVSYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRL 411
             R + P+ V+YNTLI  +  +G +  A  LL++M+  G+ P++ T   L++G+  EG  
Sbjct: 293 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 352

Query: 412 ISALNLVVEIQKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKL 471
             AL +   ++  G+T +   Y  L+  LC+      A+    R+  +        Y  +
Sbjct: 353 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 412

Query: 472 IESFCRSNNVN-------------FKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEV 531
           I+  C++  ++               P I TY +LI+  C++ R    + ++  +    +
Sbjct: 413 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 472

Query: 532 LPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLME 574
            P+  I   L+   C+ G   +A  +  +   +    D  +FN LV   C  G   +  E
Sbjct: 473 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 532

BLAST of IVF0008940 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.5e-45
Identity = 131/509 (25.74%), Postives = 225/509 (44.20%), Query Frame = 0

Query: 113 LAFFNWVKYDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNL 172
           L +++W+  + DI ++      ++H LA ++++      L   +    D      +F  +
Sbjct: 85  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSD-HQVHSIFHAI 144

Query: 173 VLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKRMVKWVLSQADGEDWSSLKC----- 232
            +C   C  N +I +ML+ AY         + +FKR      S   G   S+L C     
Sbjct: 145 SMCDNVC-VNSIIADMLVLAYANNSRFELGFEAFKR------SGYYGYKLSALSCKPLMI 204

Query: 233 -------------IY--------------FNILTYVLCRDGDVNKINEFLEKMEEEGFDP 292
                        +Y              FN++   LC+ G +NK  + +E M+  G  P
Sbjct: 205 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 264

Query: 293 DVVTYNTLIDSYCR---RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAH 352
           +VV+YNTLID YC+    G++  A  + + M    V P+L ++  L+ G  +   +  + 
Sbjct: 265 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 324

Query: 353 QLFHRMIDRGMDPDVVSYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGY 412
           ++F  M+D+ + P+V+SYN+LI   C  G + EA S+   M+  G+ P+  T   L+ G+
Sbjct: 325 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 384

Query: 413 GREGRLISALNLVVEIQKLGVTIAHDIYKYLIISLC---QEDRPFAAKSLLERILEDRFQ 472
            +   L  AL++   ++  G      +Y  LI + C   + D  FA K  +ER   +   
Sbjct: 385 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER---EGIV 444

Query: 473 PDSDIYNKLIESFCRSNNVNFK------------PTIYTYKSLIHCMCEINRSVDGEGLM 532
           PD   YN LI   CR+ N+               P + T+  L+   C    S     L+
Sbjct: 445 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 504

Query: 533 EEMVESEVLPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQF-FDSESFNSLVKVYCD 571
           +EM +  + P H     ++ GYCKEGN   A ++     K+ +   +  S+N L++ Y  
Sbjct: 505 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 564

BLAST of IVF0008940 vs. ExPASy TrEMBL
Match: A0A5D3BTR0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00460 PE=4 SV=1)

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 575/629 (91.41%), Postives = 579/629 (92.05%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
           MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN
Sbjct: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
           PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK
Sbjct: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120

Query: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180
           YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180

Query: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKRMVK----------------WVLSQADGEDWSS 240
           WNPVIFEMLIKAYVKLDLIHESYWSFKRMVK                    ++DG+ W  
Sbjct: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKRMVKLGFVPSVIACNCILHGLAKMKSDGQCWEL 240

Query: 241 LK----------CIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300
            +             FNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR
Sbjct: 241 YEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300

Query: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360
           RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS
Sbjct: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360

Query: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420
           YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ
Sbjct: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420

Query: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV- 480
           KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 
Sbjct: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNVS 480

Query: 481 ------------NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540
                       NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV
Sbjct: 481 EALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540

Query: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 591
           NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL
Sbjct: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 600

BLAST of IVF0008940 vs. ExPASy TrEMBL
Match: A0A1S3C995 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucumis melo OX=3656 GN=LOC103498097 PE=4 SV=1)

HSP 1 Score: 1129.0 bits (2919), Expect = 0.0e+00
Identity = 574/629 (91.26%), Postives = 579/629 (92.05%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
           MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN
Sbjct: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
           PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK
Sbjct: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120

Query: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180
           YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180

Query: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKRMVK----------------WVLSQADGEDWSS 240
           WNPVIFEMLIKAYVKLDLIHESYWSFK+MVK                    ++DG+ W  
Sbjct: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPSVIACNCILHGLAKMKSDGQCWEL 240

Query: 241 LK----------CIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300
            +             FNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR
Sbjct: 241 YEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300

Query: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360
           RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS
Sbjct: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360

Query: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420
           YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ
Sbjct: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420

Query: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV- 480
           KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 
Sbjct: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNVS 480

Query: 481 ------------NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540
                       NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV
Sbjct: 481 EALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540

Query: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 591
           NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL
Sbjct: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 600

BLAST of IVF0008940 vs. ExPASy TrEMBL
Match: A0A0A0KSF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523120 PE=4 SV=1)

HSP 1 Score: 1042.0 bits (2693), Expect = 9.8e-301
Identity = 535/636 (84.12%), Postives = 556/636 (87.42%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTL-------SSSSSSTFLQSIPESEAKSIVNPLYH 60
           MLRTTASNLPKL+QSFFF +SFSKSTL       SSSSSSTFLQSIPESEAK IVNPLYH
Sbjct: 1   MLRTTASNLPKLAQSFFFHTSFSKSTLSSSSSSSSSSSSSTFLQSIPESEAKLIVNPLYH 60

Query: 61  FLPQNQNPFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSAL 120
           FLPQNQNPFNIVELVS HLKTNNPRLALLQ++IK LIP+LGH QISKILLRCQSNFVSAL
Sbjct: 61  FLPQNQNPFNIVELVSSHLKTNNPRLALLQSHIKELIPHLGHRQISKILLRCQSNFVSAL 120

Query: 121 AFFNWVKYDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLV 180
           AFFNWVKYDLDIRL+SHNYCLIIHILAWSRQFPLAMK LSELIELSKDVSSSEDVFQNLV
Sbjct: 121 AFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKDVSSSEDVFQNLV 180

Query: 181 LCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKRMVK---------------------- 240
           LCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFK+MVK                      
Sbjct: 181 LCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKS 240

Query: 241 ----WVLSQADGEDWSSLKCIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNT 300
               W L +  G          FNILTYVLCRDGDVNKIN FLEKMEEEGFDPDVVTYNT
Sbjct: 241 DAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNT 300

Query: 301 LIDSYCRRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRG 360
           LIDSY RRGRL+DAFYLY+IMYRR VMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRG
Sbjct: 301 LIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRG 360

Query: 361 MDPDVVSYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISAL 420
           MDPDVV YNTLIGAYCKDGMLQEARSLLH+MIGIGIHPD+FTCRILVEGYGREGRLISAL
Sbjct: 361 MDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISAL 420

Query: 421 NLVVEIQKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESF 480
           NLVVEIQKLGVT+AHDIYKYLIISLC+EDRPFAAKSLLERILED FQPDSDIYNKLIESF
Sbjct: 421 NLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESF 480

Query: 481 CRSNNV-------------NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDH 540
           CRSNNV             N+KPT  TYKSLIHCMCEINRSVDGEGLM EMVESEV+PDH
Sbjct: 481 CRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDH 540

Query: 541 EICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTR 591
           EICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVY D+GNETKLMELQ R
Sbjct: 541 EICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQDR 600

BLAST of IVF0008940 vs. ExPASy TrEMBL
Match: A0A6J1C1W2 (pentatricopeptide repeat-containing protein At5g40400 OS=Momordica charantia OX=3673 GN=LOC111006668 PE=4 SV=1)

HSP 1 Score: 887.1 bits (2291), Expect = 4.0e-254
Identity = 448/627 (71.45%), Postives = 505/627 (80.54%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
           M RT+ S+L KLS SFF L+   KS  SS+SSSTFLQ IPES+A+ IVNPL+HFLPQNQN
Sbjct: 1   MHRTSTSSLAKLSPSFFCLAFVPKSAFSSASSSTFLQPIPESQAQLIVNPLFHFLPQNQN 60

Query: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
           PFNIVE+V  HLKT NP LA LQ+ IK L+P+LGH ++SK+LLRCQSNF SALAFFNWVK
Sbjct: 61  PFNIVEIVCSHLKTGNPELARLQSEIKELLPHLGHREVSKVLLRCQSNFGSALAFFNWVK 120

Query: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180
           YDL++R NS NYCLIIHILAWSRQ PLAMK LSELIELS+     EDVFQNLVLCTEHCN
Sbjct: 121 YDLNLRPNSKNYCLIIHILAWSRQLPLAMKFLSELIELSE-----EDVFQNLVLCTEHCN 180

Query: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKRMVK--------------------------WVL 240
           WNPVIFEMLIKAY+K+ +I ESYWSFK+MV+                          W L
Sbjct: 181 WNPVIFEMLIKAYMKVGMIQESYWSFKKMVRLGFVPSVIACNCILNGLAKMKCDGHCWEL 240

Query: 241 SQADGEDWSSLKCIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300
            +  G          FNILTYVLCRDGDVNK+NEFLEKMEEEGFDPD+VTYNTLI SYCR
Sbjct: 241 YEEMGRIGVHSNAYTFNILTYVLCRDGDVNKVNEFLEKMEEEGFDPDIVTYNTLIGSYCR 300

Query: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360
           RGRL+DAF+LYRIMYRR VMPDLVSYTSLM GLC++GRVREAHQ+FHRMIDRG+DPDVVS
Sbjct: 301 RGRLEDAFHLYRIMYRRGVMPDLVSYTSLMNGLCQIGRVREAHQIFHRMIDRGLDPDVVS 360

Query: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420
           YN LI AYCK G L EAR LLHDMI IG++PD+FTCRI+VEGYGREGRLISALNLVVE+Q
Sbjct: 361 YNMLISAYCKVGRLPEARLLLHDMIRIGLYPDSFTCRIMVEGYGREGRLISALNLVVELQ 420

Query: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSN--- 480
           KLGV +  DIYKYLIISLCQEDRPFAAKSLLERI+ D F+PD+ IY KLIESFCR N   
Sbjct: 421 KLGVAVTCDIYKYLIISLCQEDRPFAAKSLLERIINDGFEPDAGIYGKLIESFCRGNHAS 480

Query: 481 ----------NVNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540
                     N NF+P +  YKSLI C+CEINRS DGEGLM EMVES + PDH ICRAL+
Sbjct: 481 EALLMKSEMENRNFEPGVDIYKSLICCLCEINRSGDGEGLMVEMVESGLPPDHIICRALI 540

Query: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 589
           NG+CKEGNADKAESLL SFAK+FQFFD+ESFN+L+K Y D+GNETKLMELQ RMLKAGF+
Sbjct: 541 NGHCKEGNADKAESLLASFAKEFQFFDTESFNALIKFYHDVGNETKLMELQDRMLKAGFV 600

BLAST of IVF0008940 vs. ExPASy TrEMBL
Match: A0A6J1E7L8 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita moschata OX=3662 GN=LOC111430138 PE=4 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.7e-252
Identity = 450/627 (71.77%), Postives = 506/627 (80.70%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
           M R  ASNL KLS+ F FL+S  KS  SS+SSSTFL SIP SE K IVNPLYHFLPQNQN
Sbjct: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
           PFNIVELVS HLKT+N  L+LLQ++IK L+P+LGH ++SKI+LRCQSNFVS LAFFNWVK
Sbjct: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120

Query: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKD-VSSSEDVFQNLVLCTEHC 180
           +DL I L+S NYCLIIHILAWSRQF +AMK LSELIELSKD  S SEDVF NLVLCTEHC
Sbjct: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKLDLIHESYWSFKRMVK--------------------------WV 240
           NWNPVIFEMLIKAYVK+ +I ESY SFK+MVK                          W 
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240

Query: 241 LSQADGEDWSSLKCIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYC 300
           L +  G          FNILTYVLCR GDVNK+NEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300

Query: 301 RRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVV 360
           RRGRLDDAFYLYRIM+RR VMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR +DPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360

Query: 361 SYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEI 420
            YNTLI AYCKDG LQEARSLLHDM  IGI PD+FTCRI+VEGYGR GRLISALNLVVE+
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420

Query: 421 QKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 480
           +KLG  + ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIESFCR +NV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480

Query: 481 -------------NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRAL 540
                        NFK +I +YK LI C+C INRSVDGEGLM EMVES VLPDH+ICR L
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540

Query: 541 VNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGF 588
           +NGYCKEGN  KAESLLVSFAKDF+FFD+ESFN+LVK + D GNET+LM+LQ RMLK GF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600

BLAST of IVF0008940 vs. NCBI nr
Match: KAA0037561.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK03111.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1128 bits (2917), Expect = 0.0
Identity = 577/629 (91.73%), Postives = 582/629 (92.53%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
           MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN
Sbjct: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
           PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK
Sbjct: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120

Query: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180
           YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180

Query: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKRMVK--WVLS--------------QADGEDWSS 240
           WNPVIFEMLIKAYVKLDLIHESYWSFKRMVK  +V S              ++DG+ W  
Sbjct: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKRMVKLGFVPSVIACNCILHGLAKMKSDGQCWEL 240

Query: 241 LK----------CIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300
            +             FNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR
Sbjct: 241 YEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300

Query: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360
           RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS
Sbjct: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360

Query: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420
           YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ
Sbjct: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420

Query: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV- 480
           KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 
Sbjct: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNVS 480

Query: 481 ------------NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540
                       NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV
Sbjct: 481 EALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540

Query: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 590
           NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL
Sbjct: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 600

BLAST of IVF0008940 vs. NCBI nr
Match: XP_008458797.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Cucumis melo])

HSP 1 Score: 1127 bits (2914), Expect = 0.0
Identity = 576/629 (91.57%), Postives = 582/629 (92.53%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
           MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN
Sbjct: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
           PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK
Sbjct: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120

Query: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180
           YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180

Query: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKRMVK--WVLS--------------QADGEDWSS 240
           WNPVIFEMLIKAYVKLDLIHESYWSFK+MVK  +V S              ++DG+ W  
Sbjct: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPSVIACNCILHGLAKMKSDGQCWEL 240

Query: 241 LK----------CIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300
            +             FNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR
Sbjct: 241 YEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300

Query: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360
           RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS
Sbjct: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360

Query: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420
           YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ
Sbjct: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420

Query: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV- 480
           KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 
Sbjct: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNVS 480

Query: 481 ------------NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540
                       NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV
Sbjct: 481 EALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540

Query: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 590
           NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL
Sbjct: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 600

BLAST of IVF0008940 vs. NCBI nr
Match: XP_004142850.2 (pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >XP_011655402.1 pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >XP_011655403.1 pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >XP_011655404.1 pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >XP_011655405.1 pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >XP_011655406.1 pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >XP_031741426.1 pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >XP_031741427.1 pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >XP_031741428.1 pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >KGN51367.1 hypothetical protein Csa_008891 [Cucumis sativus])

HSP 1 Score: 1040 bits (2688), Expect = 0.0
Identity = 535/636 (84.12%), Postives = 556/636 (87.42%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSS-------TFLQSIPESEAKSIVNPLYH 60
           MLRTTASNLPKL+QSFFF +SFSKSTLSSSSSS       TFLQSIPESEAK IVNPLYH
Sbjct: 1   MLRTTASNLPKLAQSFFFHTSFSKSTLSSSSSSSSSSSSSTFLQSIPESEAKLIVNPLYH 60

Query: 61  FLPQNQNPFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSAL 120
           FLPQNQNPFNIVELVS HLKTNNPRLALLQ++IK LIP+LGH QISKILLRCQSNFVSAL
Sbjct: 61  FLPQNQNPFNIVELVSSHLKTNNPRLALLQSHIKELIPHLGHRQISKILLRCQSNFVSAL 120

Query: 121 AFFNWVKYDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLV 180
           AFFNWVKYDLDIRL+SHNYCLIIHILAWSRQFPLAMK LSELIELSKDVSSSEDVFQNLV
Sbjct: 121 AFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKDVSSSEDVFQNLV 180

Query: 181 LCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKRMVK---------------------- 240
           LCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFK+MVK                      
Sbjct: 181 LCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKS 240

Query: 241 ----WVLSQADGEDWSSLKCIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNT 300
               W L +  G          FNILTYVLCRDGDVNKIN FLEKMEEEGFDPDVVTYNT
Sbjct: 241 DAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNT 300

Query: 301 LIDSYCRRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRG 360
           LIDSY RRGRL+DAFYLY+IMYRR VMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRG
Sbjct: 301 LIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRG 360

Query: 361 MDPDVVSYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISAL 420
           MDPDVV YNTLIGAYCKDGMLQEARSLLH+MIGIGIHPD+FTCRILVEGYGREGRLISAL
Sbjct: 361 MDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISAL 420

Query: 421 NLVVEIQKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESF 480
           NLVVEIQKLGVT+AHDIYKYLIISLC+EDRPFAAKSLLERILED FQPDSDIYNKLIESF
Sbjct: 421 NLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESF 480

Query: 481 CRSNNV-------------NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDH 540
           CRSNNV             N+KPT  TYKSLIHCMCEINRSVDGEGLM EMVESEV+PDH
Sbjct: 481 CRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDH 540

Query: 541 EICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTR 590
           EICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVY D+GNETKLMELQ R
Sbjct: 541 EICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQDR 600

BLAST of IVF0008940 vs. NCBI nr
Match: XP_038890312.1 (pentatricopeptide repeat-containing protein At5g40400 [Benincasa hispida] >XP_038890313.1 pentatricopeptide repeat-containing protein At5g40400 [Benincasa hispida])

HSP 1 Score: 971 bits (2509), Expect = 0.0
Identity = 498/630 (79.05%), Postives = 539/630 (85.56%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIV-NPLYHFLPQNQ 60
           M RT+ S LPKLSQSF  L+SF KST SS+SSSTFLQSIP+SE KSIV NPLYHFLPQNQ
Sbjct: 1   MHRTSTSILPKLSQSF--LTSFPKSTFSSASSSTFLQSIPQSETKSIVVNPLYHFLPQNQ 60

Query: 61  NPFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWV 120
           NPFNI++L+S HLKT NP+LALLQ+ IK L+P+LG  +ISKILLRCQSNFVSALAFFNWV
Sbjct: 61  NPFNIIDLISSHLKTGNPQLALLQSEIKELLPHLGPREISKILLRCQSNFVSALAFFNWV 120

Query: 121 KYDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHC 180
           KYDLD+RLNSHNYCLIIHILAWSRQFPLAMK LSELIELSKDVS+ EDVFQNLVLCTEHC
Sbjct: 121 KYDLDLRLNSHNYCLIIHILAWSRQFPLAMKFLSELIELSKDVSNREDVFQNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKLDLIHESYWSFKRMVK--------------------------WV 240
           NWNPVI EMLIKAYVKLD+I ESYWSFK+MVK                          W 
Sbjct: 181 NWNPVILEMLIKAYVKLDMIQESYWSFKKMVKLGFVPSVIACNCILNGLAKMKYDEKCWE 240

Query: 241 LSQADGEDWSSLKCIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYC 300
           L +  G          FNILTYVLCRDGD+NKINEFLEKMEEEGF+PDVVTYNTLIDSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRDGDMNKINEFLEKMEEEGFNPDVVTYNTLIDSYC 300

Query: 301 RRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVV 360
           RR RLD AFYLYRIMYRR VMPDLVSYTSLM+GLCRLGR+REAHQLFHRMIDRGMDPDVV
Sbjct: 301 RRERLDYAFYLYRIMYRRGVMPDLVSYTSLMKGLCRLGRLREAHQLFHRMIDRGMDPDVV 360

Query: 361 SYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEI 420
           SYNTLIGAYCKDG LQ+ARSLLHDMIGIGIHPD+FTCRILVEG+GREGRLISALNLVVE+
Sbjct: 361 SYNTLIGAYCKDGRLQDARSLLHDMIGIGIHPDSFTCRILVEGHGREGRLISALNLVVEL 420

Query: 421 QKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 480
           QKLGVTIA++IY+YLIISLC+EDRPFAAKSLLERI+++ FQPDSDIYNKLIESFCR NNV
Sbjct: 421 QKLGVTIAYNIYEYLIISLCREDRPFAAKSLLERIIKEGFQPDSDIYNKLIESFCRGNNV 480

Query: 481 -------------NFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRAL 540
                        NFKP+I  YKSLI CM EINR+VDGEGLM EMVE  VLPDHEICRAL
Sbjct: 481 SEALLLKLEMINRNFKPSIDAYKSLICCMSEINRTVDGEGLMVEMVEFGVLPDHEICRAL 540

Query: 541 VNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGF 590
           +NGYCKEGNADKAESLLVSFAKDFQFF+SESFN+LVKVY D+GNETKLMELQ RMLKAGF
Sbjct: 541 INGYCKEGNADKAESLLVSFAKDFQFFESESFNALVKVYQDVGNETKLMELQDRMLKAGF 600

BLAST of IVF0008940 vs. NCBI nr
Match: XP_022134396.1 (pentatricopeptide repeat-containing protein At5g40400 [Momordica charantia] >XP_022134397.1 pentatricopeptide repeat-containing protein At5g40400 [Momordica charantia] >XP_022134398.1 pentatricopeptide repeat-containing protein At5g40400 [Momordica charantia])

HSP 1 Score: 885 bits (2286), Expect = 0.0
Identity = 448/627 (71.45%), Postives = 505/627 (80.54%), Query Frame = 0

Query: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
           M RT+ S+L KLS SFF L+   KS  SS+SSSTFLQ IPES+A+ IVNPL+HFLPQNQN
Sbjct: 1   MHRTSTSSLAKLSPSFFCLAFVPKSAFSSASSSTFLQPIPESQAQLIVNPLFHFLPQNQN 60

Query: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
           PFNIVE+V  HLKT NP LA LQ+ IK L+P+LGH ++SK+LLRCQSNF SALAFFNWVK
Sbjct: 61  PFNIVEIVCSHLKTGNPELARLQSEIKELLPHLGHREVSKVLLRCQSNFGSALAFFNWVK 120

Query: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCN 180
           YDL++R NS NYCLIIHILAWSRQ PLAMK LSELIELS+     EDVFQNLVLCTEHCN
Sbjct: 121 YDLNLRPNSKNYCLIIHILAWSRQLPLAMKFLSELIELSE-----EDVFQNLVLCTEHCN 180

Query: 181 WNPVIFEMLIKAYVKLDLIHESYWSFKRMVK--------------------------WVL 240
           WNPVIFEMLIKAY+K+ +I ESYWSFK+MV+                          W L
Sbjct: 181 WNPVIFEMLIKAYMKVGMIQESYWSFKKMVRLGFVPSVIACNCILNGLAKMKCDGHCWEL 240

Query: 241 SQADGEDWSSLKCIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 300
            +  G          FNILTYVLCRDGDVNK+NEFLEKMEEEGFDPD+VTYNTLI SYCR
Sbjct: 241 YEEMGRIGVHSNAYTFNILTYVLCRDGDVNKVNEFLEKMEEEGFDPDIVTYNTLIGSYCR 300

Query: 301 RGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVS 360
           RGRL+DAF+LYRIMYRR VMPDLVSYTSLM GLC++GRVREAHQ+FHRMIDRG+DPDVVS
Sbjct: 301 RGRLEDAFHLYRIMYRRGVMPDLVSYTSLMNGLCQIGRVREAHQIFHRMIDRGLDPDVVS 360

Query: 361 YNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQ 420
           YN LI AYCK G L EAR LLHDMI IG++PD+FTCRI+VEGYGREGRLISALNLVVE+Q
Sbjct: 361 YNMLISAYCKVGRLPEARLLLHDMIRIGLYPDSFTCRIMVEGYGREGRLISALNLVVELQ 420

Query: 421 KLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSN--- 480
           KLGV +  DIYKYLIISLCQEDRPFAAKSLLERI+ D F+PD+ IY KLIESFCR N   
Sbjct: 421 KLGVAVTCDIYKYLIISLCQEDRPFAAKSLLERIINDGFEPDAGIYGKLIESFCRGNHAS 480

Query: 481 ----------NVNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALV 540
                     N NF+P +  YKSLI C+CEINRS DGEGLM EMVES + PDH ICRAL+
Sbjct: 481 EALLMKSEMENRNFEPGVDIYKSLICCLCEINRSGDGEGLMVEMVESGLPPDHIICRALI 540

Query: 541 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGFL 588
           NG+CKEGNADKAESLL SFAK+FQFFD+ESFN+L+K Y D+GNETKLMELQ RMLKAGF+
Sbjct: 541 NGHCKEGNADKAESLLASFAKEFQFFDTESFNALIKFYHDVGNETKLMELQDRMLKAGFV 600

BLAST of IVF0008940 vs. TAIR 10
Match: AT5G40400.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 549.3 bits (1414), Expect = 3.8e-156
Identity = 298/609 (48.93%), Postives = 404/609 (66.34%), Query Frame = 0

Query: 9   LPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQNPFNIVELV 68
           +  L  +  F SS+S S +   S      +IP    K I+NPLY+ LPQ+QNP  IV+++
Sbjct: 1   MKNLVSNLRFFSSYSSSIVPRCS------NIP----KPILNPLYNLLPQSQNPSKIVDVI 60

Query: 69  SLHLKTNNPRLAL--LQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVKYDLDIR 128
              L  ++  + L  L+  +K LIP+LG+ +IS++LLR QS+   A+ FF WVK+DL  R
Sbjct: 61  CSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKR 120

Query: 129 LNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIF 188
            N  NYCL++HIL  S++FPLAM+ L ELIEL+       DVF+ LV  T+ CNW+PV+F
Sbjct: 121 PNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSK-KEEVDVFRVLVSATDECNWDPVVF 180

Query: 189 EMLIKAYVKLDLIHESYWSFK---------------RMVKWVLSQADGED-WS--SLKC- 248
           +ML+K Y+KL L+ E +  F+                ++  +L     ED W   S+ C 
Sbjct: 181 DMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCR 240

Query: 249 -------IYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCRRGRLDD 308
                    FNILT V C D +  ++++FLEKMEEEGF+PD+VTYNTL+ SYCRRGRL +
Sbjct: 241 VGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKE 300

Query: 309 AFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVSYNTLIG 368
           AFYLY+IMYRR V+PDLV+YTSL++GLC+ GRVREAHQ FHRM+DRG+ PD +SYNTLI 
Sbjct: 301 AFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIY 360

Query: 369 AYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQKLGVTI 428
           AYCK+GM+Q+++ LLH+M+G  + PD FTC+++VEG+ REGRL+SA+N VVE+++L V I
Sbjct: 361 AYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDI 420

Query: 429 AHDIYKYLIISLCQEDRPFAAKSLLERILEDR-FQPDSDIYNKLIESFCRSN-------- 488
             ++  +LI+SLCQE +PFAAK LL+RI+E+   +   + YN LIES  R +        
Sbjct: 421 PFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVL 480

Query: 489 -----NVNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRALVNGYCK 548
                N N      TY++LI C+C I R+ + E LM EM +SEV PD  IC ALV GYCK
Sbjct: 481 KGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCK 540

Query: 549 EGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMG-NETKLMELQTRMLKAGFLPNNL 575
           E + DKAE LL  FA +F+ FD ES+NSLVK  C+ G    K +ELQ RM + GF+PN L
Sbjct: 541 ELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRL 598

BLAST of IVF0008940 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 7.4e-51
Identity = 145/596 (24.33%), Postives = 261/596 (43.79%), Query Frame = 0

Query: 70  LHLKTNNPRLALLQANIKGLIPYLGHCQISK-----ILLRCQSNFVSALAFFNWVKYDLD 129
           +H  TN  +L   +   + L PY   C+        +L++ + ++   L FF+W +   D
Sbjct: 59  VHQITNVIKLRRAEPLRRSLKPY--ECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRD 118

Query: 130 IRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSK-DVSSSEDVFQNLVLCTEHCNW-- 189
             L S   C++IH+   S+   +A  L+S   E  K +V+ S   F +L++ T + +W  
Sbjct: 119 SNLES--LCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYT-YKDWGS 178

Query: 190 NPVIFEMLIKAYVKLDLIHESYWSFKRMVKW-----------VLSQADGEDWSSLKCIY- 249
           +P +F++  +  V   L+ E+   F++M+ +            L++   + + +   I  
Sbjct: 179 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 238

Query: 250 ---------------FNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 309
                          +NI+ + +C+ G + + +  L  ME +G+ PDV++Y+T+++ YCR
Sbjct: 239 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 298

Query: 310 RGRLDDAFYLYRI-----------------------------------MYRRSVMPDLVS 369
            G LD  + L  +                                   M R+ ++PD V 
Sbjct: 299 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 358

Query: 370 YTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVSYNTLIGAYCKDGMLQEARSLLHDMI 429
           YT+L+ G C+ G +R A + F+ M  R + PDV++Y  +I  +C+ G + EA  L H+M 
Sbjct: 359 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 418

Query: 430 GIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQKLGVTIAHDIYKYLIISLCQEDRPF 489
             G+ PD+ T   L+ GY + G +  A  +   + + G +     Y  LI  LC+E    
Sbjct: 419 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 478

Query: 490 AAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV-------------NFKPTIYTYKSLI 549
           +A  LL  + +   QP+   YN ++   C+S N+                    TY +L+
Sbjct: 479 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 538

Query: 550 HCMCEINRSVDGEGLMEEMVESEVLPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQF 583
              C+       + +++EM+   + P       L+NG+C  G  +  E LL         
Sbjct: 539 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 598

BLAST of IVF0008940 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 7.4e-51
Identity = 145/596 (24.33%), Postives = 261/596 (43.79%), Query Frame = 0

Query: 70  LHLKTNNPRLALLQANIKGLIPYLGHCQISK-----ILLRCQSNFVSALAFFNWVKYDLD 129
           +H  TN  +L   +   + L PY   C+        +L++ + ++   L FF+W +   D
Sbjct: 59  VHQITNVIKLRRAEPLRRSLKPY--ECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRD 118

Query: 130 IRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSK-DVSSSEDVFQNLVLCTEHCNW-- 189
             L S   C++IH+   S+   +A  L+S   E  K +V+ S   F +L++ T + +W  
Sbjct: 119 SNLES--LCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYT-YKDWGS 178

Query: 190 NPVIFEMLIKAYVKLDLIHESYWSFKRMVKW-----------VLSQADGEDWSSLKCIY- 249
           +P +F++  +  V   L+ E+   F++M+ +            L++   + + +   I  
Sbjct: 179 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 238

Query: 250 ---------------FNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYCR 309
                          +NI+ + +C+ G + + +  L  ME +G+ PDV++Y+T+++ YCR
Sbjct: 239 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 298

Query: 310 RGRLDDAFYLYRI-----------------------------------MYRRSVMPDLVS 369
            G LD  + L  +                                   M R+ ++PD V 
Sbjct: 299 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 358

Query: 370 YTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVSYNTLIGAYCKDGMLQEARSLLHDMI 429
           YT+L+ G C+ G +R A + F+ M  R + PDV++Y  +I  +C+ G + EA  L H+M 
Sbjct: 359 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 418

Query: 430 GIGIHPDNFTCRILVEGYGREGRLISALNLVVEIQKLGVTIAHDIYKYLIISLCQEDRPF 489
             G+ PD+ T   L+ GY + G +  A  +   + + G +     Y  LI  LC+E    
Sbjct: 419 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 478

Query: 490 AAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV-------------NFKPTIYTYKSLI 549
           +A  LL  + +   QP+   YN ++   C+S N+                    TY +L+
Sbjct: 479 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 538

Query: 550 HCMCEINRSVDGEGLMEEMVESEVLPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQF 583
              C+       + +++EM+   + P       L+NG+C  G  +  E LL         
Sbjct: 539 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 598

BLAST of IVF0008940 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 2.8e-50
Identity = 138/532 (25.94%), Postives = 241/532 (45.30%), Query Frame = 0

Query: 99  SKILLRCQSNFVSALAFFNWVKYDLDIRLNSHNY------CLIIHILAWSRQFPLAMKLL 158
           S +LL+ Q++    L F NW         N H +      C+ +HIL   + +  A  L 
Sbjct: 52  SNLLLKSQNDQALILKFLNWA--------NPHQFFTLRCKCITLHILTKFKLYKTAQILA 111

Query: 159 SELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHES---------- 218
            ++   + D   +  VF++L    + C     +F++++K+Y +L LI ++          
Sbjct: 112 EDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAH 171

Query: 219 -----YWSFKRMV------KWVLSQADG------EDWSSLKCIYFNILTYVLCRDGDVNK 278
                  S+  ++      K  +S A+       E   S     +NIL    C  G+++ 
Sbjct: 172 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 231

Query: 279 INEFLEKMEEEGFDPDVVTYNTLIDSYCRRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMR 338
                +KME +G  P+VVTYNTLID YC+  ++DD F L R M  + + P+L+SY  ++ 
Sbjct: 232 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 291

Query: 339 GLCRLGRVREAHQLFHRMIDRGMDPDVVSYNTLIGAYCKDGMLQEARSLLHDMIGIGIHP 398
           GLCR GR++E   +   M  RG   D V+YNTLI  YCK+G   +A  +  +M+  G+ P
Sbjct: 292 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 351

Query: 399 DNFTCRILVEGYGREGRLISALNLVVEIQKLGVTIAHDIYKYLIISLCQEDRPFAAKSLL 458
              T   L+    + G +  A+  + +++  G+      Y  L+    Q+     A  +L
Sbjct: 352 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 411

Query: 459 ERILEDRFQPDSDIYNKLIESFCRSNNV-------------NFKPTIYTYKSLIHCMCEI 518
             + ++ F P    YN LI   C +  +                P + +Y +++   C  
Sbjct: 412 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 471

Query: 519 NRSVDGEGLMEEMVESEVLPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESF 578
               +   +  EMVE  + PD     +L+ G+C++    +A  L     +     D  ++
Sbjct: 472 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 531

Query: 579 NSLVKVYCDMGNETKLMELQTRMLKAGFLPNNLTCQYIIHGLWKFTRLNEQR 585
            +L+  YC  G+  K ++L   M++ G LP+ +T   +I+GL K +R  E +
Sbjct: 532 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575

BLAST of IVF0008940 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 3.1e-49
Identity = 135/503 (26.84%), Postives = 227/503 (45.13%), Query Frame = 0

Query: 112 ALAFFNWVKYDLDIRLNS--HNYCLIIHILAWSRQFPLAMKLLSELIELSKDVSSSEDVF 171
           AL F  WV     +  +      C+  HIL  +R +  A  +L EL  +S     S  VF
Sbjct: 93  ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS---GKSSFVF 152

Query: 172 QNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKRMVKWVLSQA------------ 231
             L+     CN NP ++++LI+ Y++  +I +S   F+ M  +  + +            
Sbjct: 153 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 212

Query: 232 -DGED---WSSLK----------CIYFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVV 291
             GED   WS LK             FNIL  VLC +G   K +  ++KME+ G+ P +V
Sbjct: 213 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 272

Query: 292 TYNTLIDSYCRRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRM 351
           TYNT++  YC++GR   A  L   M  + V  D+ +Y  L+  LCR  R+ + + L   M
Sbjct: 273 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 332

Query: 352 IDRGMDPDVVSYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRL 411
             R + P+ V+YNTLI  +  +G +  A  LL++M+  G+ P++ T   L++G+  EG  
Sbjct: 333 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 392

Query: 412 ISALNLVVEIQKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKL 471
             AL +   ++  G+T +   Y  L+  LC+      A+    R+  +        Y  +
Sbjct: 393 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 452

Query: 472 IESFCRSNNVN-------------FKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEV 531
           I+  C++  ++               P I TY +LI+  C++ R    + ++  +    +
Sbjct: 453 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 512

Query: 532 LPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLME 574
            P+  I   L+   C+ G   +A  +  +   +    D  +FN LV   C  G   +  E
Sbjct: 513 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 572

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FND85.4e-15548.93Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX... [more]
Q0WVK71.0e-4924.33Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q9FIX34.0e-4925.94Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9LVQ54.4e-4826.84Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
O045043.5e-4525.74Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5D3BTR00.0e+0091.41Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C9950.0e+0091.26pentatricopeptide repeat-containing protein At5g40400 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0KSF19.8e-30184.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523120 PE=4 SV=1[more]
A0A6J1C1W24.0e-25471.45pentatricopeptide repeat-containing protein At5g40400 OS=Momordica charantia OX=... [more]
A0A6J1E7L81.7e-25271.77pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita moschata OX=3... [more]
Match NameE-valueIdentityDescription
KAA0037561.10.091.73pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK03111... [more]
XP_008458797.10.091.57PREDICTED: pentatricopeptide repeat-containing protein At5g40400 [Cucumis melo][more]
XP_004142850.20.084.12pentatricopeptide repeat-containing protein At5g40400 [Cucumis sativus] >XP_0116... [more]
XP_038890312.10.079.05pentatricopeptide repeat-containing protein At5g40400 [Benincasa hispida] >XP_03... [more]
XP_022134396.10.071.45pentatricopeptide repeat-containing protein At5g40400 [Momordica charantia] >XP_... [more]
Match NameE-valueIdentityDescription
AT5G40400.13.8e-15648.93Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G05670.17.4e-5124.33Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.27.4e-5124.33Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G39710.12.8e-5025.94Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G55840.13.1e-4926.84Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 333..366
e-value: 3.3E-8
score: 31.2
coord: 298..332
e-value: 3.1E-11
score: 40.7
coord: 230..262
e-value: 1.5E-4
score: 19.7
coord: 531..563
e-value: 0.0015
score: 16.6
coord: 496..517
e-value: 0.0032
score: 15.5
coord: 460..493
e-value: 7.5E-5
score: 20.7
coord: 263..296
e-value: 3.6E-10
score: 37.4
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 528..571
e-value: 0.0086
score: 16.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 330..377
e-value: 6.4E-14
score: 51.9
coord: 260..309
e-value: 5.5E-18
score: 64.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 499..517
e-value: 0.0059
score: 16.8
coord: 230..258
e-value: 0.026
score: 14.8
coord: 460..488
e-value: 0.038
score: 14.2
coord: 405..432
e-value: 1.3
score: 9.5
coord: 186..211
e-value: 1.0
score: 9.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 528..562
score: 10.325603
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 296..330
score: 14.216864
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 458..492
score: 9.613118
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 366..400
score: 9.04313
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 261..295
score: 13.67976
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 331..365
score: 13.307076
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 226..260
score: 9.317163
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 397..452
e-value: 3.7E-5
score: 25.3
coord: 453..523
e-value: 1.9E-13
score: 52.4
coord: 327..396
e-value: 2.1E-18
score: 68.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 216..326
e-value: 5.3E-32
score: 112.6
coord: 524..588
e-value: 8.4E-7
score: 30.5
coord: 95..215
e-value: 8.4E-8
score: 33.7
NoneNo IPR availablePANTHERPTHR47941:SF6OS01G0546700 PROTEINcoord: 21..212
coord: 229..580
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 21..212
coord: 229..580

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008940.1IVF0008940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding