IVF0008939 (gene) Melon (IVF77) v1

Overview


Name	IVF0008939
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag-pro-like protein
Location	chr11: 1615365 .. 1616395 (-)
RNA-Seq Expression	IVF0008939
Synteny	IVF0008939

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTTGTCAAGACGTTGAAGGATTGGAGGATCAATTGAAAAAAATCCTAGAATTGCTCACTACTGGAAGAGGAAAGAATGTTGCGGGGACTTCATCACAAGTGGAAGTAGATCTGAATCAGGTACTAGAGGACATGTCTGCATACCTTCCGGGTTTCACTCCTCAAAGGTCGTCTAGTCCACGCATGGTGGATAGGACATATCCTACATCCTTTCCCATGCCAAATCCTAACACAACCACCCAACAGGCAGTCTATGTGAGTGACCCATATCTACTCCAATTACTGAAGGTGGTAAGAAAATTTCAGAAGAGTAGGGTAGTAGAAGAAGACTGGAATTTCTAGAAGAAAGACTGCGTGCCATTGAAGGTGCAGACATGTACGGGAGTATTGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCTCTCCCAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCACATGTCCAAAAAGTCATCTAGTTATGTACTGTCGAAAAATATCAGTTTACGCTCATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTTGGCTCGACTTCTCGTTGGTACATGCAATTGGATGGTTCACAGGTGCATAGGTGGAAGGATCTTGCCAATTCTTTCTTAAAACAATATAAGTACAACATTGATATGGCACCCGACCGTCTGGATCTTCAAAGGATGGAAAAGAAGAATGTTGAAAATTTTAAGGAGTATGCACAACGATGGAGAGATTTAGCTACACAAGTGCAACCTCCCCTAACCGATAAAGAATTGATAGCCATGTTCATAAACACTATTCGGGCCCCATACTATGATATAATGGTTGGAAGTGCTTCGACTAATTTCTCGGACGTCATAACAATTGAGGAGAGAATTGAATTTGGAGTGAAGAATGGAAAGATCATCGATTCTTCTTCAGAGAGAAGAAGGATGATGACCTCAAAGAAAAAATGGGAGAAGTACACGAGTTGA

mRNA sequence

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTTGTCAAGACGTTGAAGGATTGGAGGATCAATTGAAAAAAATCCTAGAATTGCTCACTACTGGAAGAGGAAAGAATGTTGCGGGGACTTCATCACAAGTGGAAGTAGATCTGAATCAGGTACTAGAGGACATGTCTGCATACCTTCCGGGTTTCACTCCTCAAAGGTCGTCTAGTCCACGCATGGTGGATAGGACATATCCTACATCCTTTCCCATGCCAAATCCTAACACAACCACCCAACAGGCAGTCTATGTGAGTGACCCATATCTACTCCAATTACTGAAGGTGGTGCATAGGTGGAAGGATCTTGCCAATTCTTTCTTAAAACAATATAAGTACAACATTGATATGGCACCCGACCGTCTGGATCTTCAAAGGATGGAAAAGAAGAATGTTGAAAATTTTAAGGAGTATGCACAACGATGGAGAGATTTAGCTACACAAGTGCAACCTCCCCTAACCGATAAAGAATTGATAGCCATGTTCATAAACACTATTCGGGCCCCATACTATGATATAATGGTTGGAAGTGCTTCGACTAATTTCTCGGACGTCATAACAATTGAGGAGAGAATTGAATTTGGAGTGAAGAATGGAAAGATCATCGATTCTTCTTCAGAGAGAAGAAGGATGATGACCTCAAAGAAAAAATGGGAGAAGTACACGAGTTGA

Coding sequence (CDS)

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTTGTCAAGACGTTGAAGGATTGGAGGATCAATTGAAAAAAATCCTAGAATTGCTCACTACTGGAAGAGGAAAGAATGTTGCGGGGACTTCATCACAAGTGGAAGTAGATCTGAATCAGGTACTAGAGGACATGTCTGCATACCTTCCGGGTTTCACTCCTCAAAGGTCGTCTAGTCCACGCATGGTGGATAGGACATATCCTACATCCTTTCCCATGCCAAATCCTAACACAACCACCCAACAGGCAGTCTATGTGAGTGACCCATATCTACTCCAATTACTGAAGGTGGTGCATAGGTGGAAGGATCTTGCCAATTCTTTCTTAAAACAATATAAGTACAACATTGATATGGCACCCGACCGTCTGGATCTTCAAAGGATGGAAAAGAAGAATGTTGAAAATTTTAAGGAGTATGCACAACGATGGAGAGATTTAGCTACACAAGTGCAACCTCCCCTAACCGATAAAGAATTGATAGCCATGTTCATAAACACTATTCGGGCCCCATACTATGATATAATGGTTGGAAGTGCTTCGACTAATTTCTCGGACGTCATAACAATTGAGGAGAGAATTGAATTTGGAGTGAAGAATGGAAAGATCATCGATTCTTCTTCAGAGAGAAGAAGGATGATGACCTCAAAGAAAAAATGGGAGAAGTACACGAGTTGA

Protein sequence

MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKVVHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS

Homology

[Close]

BLAST of IVF0008939 vs. ExPASy TrEMBL
Match: A0A5D3BSD2 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00630 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.7e-127
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60
           MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL
Sbjct: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60

Query: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKVVHRWKDLANSFL 120
           PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKVVHRWKDLANSFL
Sbjct: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKVVHRWKDLANSFL 120

Query: 121 KQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRA 180
           KQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRA
Sbjct: 121 KQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRA 180

Query: 181 PYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS 236
           PYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS
Sbjct: 181 PYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS 235

[Close]

BLAST of IVF0008939 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.6e-87
Identity = 194/337 (57.57%), Postives = 208/337 (61.72%), Query Frame = 0


Query: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60
           MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+V GTSSQVEVDLNQVLEDM  Y 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP-------------------- 120
           PGFTPQRSSSPRM DRTYPTSFP PNPNTTTQQA + ++P                    
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ---YLLQLLKV------------------------------------------------- 180
              +L + L+V                                                 
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 ------------------------------------VHRWKDLANSFLKQYKYNIDMAPD 230
                                               VHRWKDLA+SFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of IVF0008939 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.7e-86
Identity = 193/337 (57.27%), Postives = 207/337 (61.42%), Query Frame = 0


Query: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60
           MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+VAGTSSQVEVDLNQVLEDM AY 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP-------------------- 120
           PGFTPQRSSSPRM DRTYPTSFP PNPNTTTQQ  + ++P                    
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ---YLLQLLKV------------------------------------------------- 180
              +L + L+V                                                 
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 ------------------------------------VHRWKDLANSFLKQYKYNIDMAPD 230
                                               VHRWKDLA+SFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of IVF0008939 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.7e-84
Identity = 182/296 (61.49%), Postives = 196/296 (66.22%), Query Frame = 0


Query: 14  QDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRM 73
           QDVEGL+DQL KILELLTTGRGK+V GTSSQVEVDLNQVLEDM AY PGFTPQRSSSPRM
Sbjct: 603 QDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRM 662

Query: 74  VDRTYPTSFPMPNPNTTTQQAVYVSDP-----------------------YLLQLLKV-- 133
            DRTYPTSFP PNPNTTTQQ  + ++P                       +L + L+V  
Sbjct: 663 GDRTYPTSFPAPNPNTTTQQEAHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLRVIE 722

Query: 134 -------------------------------------------------------VHRWK 193
                                                                  VHRWK
Sbjct: 723 DFEKYNGTSCPKSHLVMYCRKMSAYAHDDKLLIHCFQDSLVDPASRWYMQLDGSQVHRWK 782

Query: 194 DLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAM 230
           DLA+SFLKQYKYNIDMAPDRLDLQRMEKKNVE FKEYAQRWR+LA QVQPPLTDKEL AM
Sbjct: 783 DLADSFLKQYKYNIDMAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAM 842

[Close]

BLAST of IVF0008939 vs. ExPASy TrEMBL
Match: A0A5A7V1Y8 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00010 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.0e-83
Identity = 190/340 (55.88%), Postives = 202/340 (59.41%), Query Frame = 0


Query: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60
           MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+VAGTSSQVEVDLNQVLED+ AY 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLK------------- 120
           P FTPQR SSPRMVDRTYPTSFP PNPNTTTQQA +VSD     + K             
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180

Query: 181 -----------------------------------VVHRWKDLANSFLKQYKYNIDMAPD 233
                                               VHRW DLA+SFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of IVF0008939 vs. NCBI nr
Match: KAA0045606.1 (Gag-pro-like protein [Cucumis melo var. makuwa] >TYK02651.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 460 bits (1184), Expect = 3.11e-163
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60
           MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL
Sbjct: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60

Query: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKVVHRWKDLANSFL 120
           PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKVVHRWKDLANSFL
Sbjct: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKVVHRWKDLANSFL 120

Query: 121 KQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRA 180
           KQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRA
Sbjct: 121 KQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRA 180

Query: 181 PYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS 235
           PYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS
Sbjct: 181 PYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS 235

[Close]

BLAST of IVF0008939 vs. NCBI nr
Match: XP_008452348.1 (PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag-pro-like protein [Cucumis melo var. makuwa] >TYK00746.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 317 bits (812), Expect = 6.28e-105
Identity = 190/339 (56.05%), Postives = 201/339 (59.29%), Query Frame = 0


Query: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60
           MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+VAGTSSQVEVDLNQVLED+ AY 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKV------------ 120
           P FTPQR SSPRMVDRTYPTSFP PNPNTTTQQA +VSD     + K             
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180

Query: 181 ------------------------------------VHRWKDLANSFLKQYKYNIDMAPD 231
                                               VHRW DLA+SFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of IVF0008939 vs. NCBI nr
Match: KAA0049672.1 (uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (807), Expect = 7.42e-101
Identity = 176/286 (61.54%), Postives = 192/286 (67.13%), Query Frame = 0


Query: 12  VCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSP 71
           V QDVEGL+DQL KILELLTTGRGK+V GTSSQVEVDLNQVLEDM AY  GFTPQRSSSP
Sbjct: 163 VHQDVEGLKDQLTKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMHAYPSGFTPQRSSSP 222

Query: 72  RMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKV----------------------- 131
           RMVDRTYPTSFP  NPNTTTQQA +VS+P    + K                        
Sbjct: 223 RMVDRTYPTSFPTSNPNTTTQQAAHVSNPISTPITKCDVVIPPKFKTPDFEKYNGTTCSK 282

Query: 132 -------------------------------------------VHRWKDLANSFLKQYKY 191
                                                      VH WKDLA+SF K+YKY
Sbjct: 283 SHLVMYCWKMSAYAHDDKLLIHCFQDSLVGSASRWYMQLDGSQVHTWKDLADSFFKKYKY 342

Query: 192 NIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDI 231
           NIDMAPDRLDL+RMEKKNVE FKEYAQRWR+L  ++QPPLTDKEL AMFINT+RAPYYD 
Sbjct: 343 NIDMAPDRLDLRRMEKKNVETFKEYAQRWRELVAKMQPPLTDKELTAMFINTLRAPYYDR 402

[Close]

BLAST of IVF0008939 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 325 bits (832), Expect = 5.58e-100
Identity = 193/337 (57.27%), Postives = 207/337 (61.42%), Query Frame = 0


Query: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60
           MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+VAGTSSQVEVDLNQVLEDM AY 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP-------------------- 120
           PGFTPQRSSSPRM DRTYPTSFP PNPNTTTQQ  + ++P                    
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ---YLLQLLKV------------------------------------------------- 180
              +L + L+V                                                 
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 ------------------------------------VHRWKDLANSFLKQYKYNIDMAPD 229
                                               VHRWKDLA+SFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of IVF0008939 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 328 bits (842), Expect = 9.33e-100
Identity = 194/337 (57.57%), Postives = 208/337 (61.72%), Query Frame = 0


Query: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60
           MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+V GTSSQVEVDLNQVLEDM  Y 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP-------------------- 120
           PGFTPQRSSSPRM DRTYPTSFP PNPNTTTQQA + ++P                    
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ---YLLQLLKV------------------------------------------------- 180
              +L + L+V                                                 
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 ------------------------------------VHRWKDLANSFLKQYKYNIDMAPD 229
                                               VHRWKDLA+SFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

The following BLAST results are available for this feature:

BLAST of IVF0008939 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0008939 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSD2	5.7e-127	100.00	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280...	[more]
A0A5A7VAU5	2.6e-87	57.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V681	3.7e-86	57.27	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SUT0	2.7e-84	61.49	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7V1Y8	1.0e-83	55.88	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420...	[more]

BLAST of IVF0008939 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045606.1	3.11e-163	100.00	Gag-pro-like protein [Cucumis melo var. makuwa] >TYK02651.1 Gag-pro-like protein...	[more]
XP_008452348.1	6.28e-105	56.05	PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag...	[more]
KAA0049672.1	7.42e-101	61.54	uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa]	[more]
KAA0061241.1	5.58e-100	57.27	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]
KAA0065293.1	9.33e-100	57.57	uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0008939 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 109..177 e-value: 5.7E-7 score: 29.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008939.1	IVF0008939.1	mRNA