IVF0008827 (gene) Melon (IVF77) v1

Overview


Name	IVF0008827
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	60S ribosomal protein L8
Location	chr04: 9101560 .. 9103879 (+)
RNA-Seq Expression	IVF0008827
Synteny	IVF0008827

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCTAGGGCAACCATCCTTCTCCTCTTAAAAACCCTAATCTATTCATCTTTCCCCGCCTCCCTTCCCCTTCCCCTTCCCCTTCCCCACTTCCCCAAAACCCTAATTTCCATTCTCAATGGGTCGTGTGATCAGAGCTCAACGTAAGGGTGCGGGATCTGTCTTCCGCTCTCACACTCACCACCGGAAGGGCCCGGCCCGTTTCCGGTCACTCGACTTCGGCGAGCGTAATGGCTACCTGAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGCACCGTTGGCCCGTGTTACCTTCCGCCATCCCTTCCGCTACAAGCACCAGAAGGAACTCTTCATCGCCGCTGAGGGTATGTACACTGGTCAGTTCGTTTACTGCGGGAAAAAGGCTAATCTTGTTGTTGGTAATGTGCTCCCCATTAGAGCCATTCCTGAAGGAGCTGTGGTTTGTAATGTGGAGCACCATGTTGGCGACAGAGGTGTGTTTGCTAGATGCTCTGGTGATTATGCTATTGTTATCAGCCACAACCCAGACAATGATACCAGCAGGTAGATTTTGATTACTAAACTTTGTTTTTGTTTTTCGAAGTGCACGCTTATTGAAGAACTTATGGATATATCTTTTTTTTTTTTTTTTTTTGCTTTTTTTGAGTATGCCTTTGTATTTTGCTGGACTTTTATTGCTTTGTACAAATGGTTTAACTCAGTTAAGCGTTTTGCGTTATGAGATGGCAGGTTTAAGATTTCTGATTTGGCCTACAGATTCTGTTTCTCGTTTATGTTGATTTTTATTGTGGTATTTGTTTTATTGATTGATATAGAAAGATTTATTATGCGAAATTACGTTTTTTTTTTCAAATTGACAAGAAATCAAATTGATGTGGGAATAATCTTATTGGCACTGTGTAGGAATTTGTGTGAGAAGAATGGTTGAAAAAGAAGAAGAAGATTTTTGAAGGAATACTTTTTATCATTTTGGAGTGCATAGTCTAACTCATTTGCAACTAATTCTTGTCAAATATTACGGATTGGATTTTCCAAACTAACAATGTTATGTTGTTTTCTTTTCTTGTTATCCTTTCACTTTGTTGGCTGATGATAATCTCGTACTTCATCTGCAAGAATATTGTTTCTCTATTCAAATGTAACTTGTGATTGTGTTCTTGGAGGGATGCATATGGTTAGTTGAGTCGCAACATGGAGTATTTTTTCTTTCACGAACATGAACATCAATATGAACGGATTTTTTAAACTTATCATAAGGAAGCGTGTACTCTGTCTAGAATATACTCTCCACATTTATGTCTGTTTGCTGAGTGATTTGCTAGTGATGGTTATATCTTGTATTCAGTTTTTTCAAGAAGGCACATGTAGAGCTTTCTCACTGGAGTGATCATATCTGTGTCAGGGTAAAAATGGGAAGGCTGAAGCAGTTTAGTGTTCTTTTTTTTTTTTTTTTTTTGTTAGTAAACTGCAGTCGTGCTTAAAAATGCTTGCTTAATTTTGTTCCTTGAATATGGAATTCTTTTTACTTGTTTTGATTTAATTCCTACAAGTCTTCGTCTCAAAATTCTGTGTCTGGCAGGATTAAGCTACCATCTGGAGCGAAGAAGATTGTACCCAGTGGATGCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTTAAGGCAGGTAATGCTTACCACAAGTTCCGTGTCAAGCGTAACTGCTGGCCGAAGGTGCGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACATATTGGTCACGCCAGCACTGTCCGCCGTGATGCACCTCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGAGGACAGGCTGCTGCTACTGCTGCCAAGGCTGACAAGGCTTAAAGTGATTCAATCGGTTCCAGACTTATTTTCCATAATCCTTAGCCCCTTTACATTATGTTTGATTGGATTTGCATTTTGTTGAAGACCCTATTTAGAAGTTTTTGTTTCTAAATTTTGTTACAAAAATCCTTTTTTGAACATAATATTCCTCGCACCCTCTTTTCTTGTTGCTGTGATGAATGTGATGAATTTGATAGCATGAACACCAACGTAATTTTTCTGAAAAAGGATCTATGTTTTAGGTTTTAGATTACAGGTTCTTGGAGAACAATTTGTAGCCAACTACTAAAATTAATTTACAAGGATATTCTAATATCATATATAGACAAATCTTTTATAAGAAAAGATCTATTATCTATCATGGGTTTTTTTAATACAAGAG

mRNA sequence

CCCTTCTAGGGCAACCATCCTTCTCCTCTTAAAAACCCTAATCTATTCATCTTTCCCCGCCTCCCTTCCCCTTCCCCTTCCCCTTCCCCACTTCCCCAAAACCCTAATTTCCATTCTCAATGGGTCGTGTGATCAGAGCTCAACGTAAGGGTGCGGGATCTGTCTTCCGCTCTCACACTCACCACCGGAAGGGCCCGGCCCGTTTCCGGTCACTCGACTTCGGCGAGCGTAATGGCTACCTGAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGCACCGTTGGCCCGTGTTACCTTCCGCCATCCCTTCCGCTACAAGCACCAGAAGGAACTCTTCATCGCCGCTGAGGGTATGTACACTGGTCAGTTCGTTTACTGCGGGAAAAAGGCTAATCTTGTTGTTGGTAATGTGCTCCCCATTAGAGCCATTCCTGAAGGAGCTGTGGTTTGTAATGTGGAGCACCATGTTGGCGACAGAGGTGTGTTTGCTAGATGCTCTGGTGATTATGCTATTGTTATCAGCCACAACCCAGACAATGATACCAGCAGGATTAAGCTACCATCTGGAGCGAAGAAGATTGTACCCAGTGGATGCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTTAAGGCAGGTAATGCTTACCACAAGTTCCGTGTCAAGCGTAACTGCTGGCCGAAGGTGCGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACATATTGGTCACGCCAGCACTGTCCGCCGTGATGCACCTCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGAGGACAGGCTGCTGCTACTGCTGCCAAGGCTGACAAGGCTTAAAGTGATTCAATCGGTTCCAGACTTATTTTCCATAATCCTTAGCCCCTTTACATTATGTTTGATTGGATTTGCATTTTGTTGAAGACCCTATTTAGAAGTTTTTGTTTCTAAATTTTGTTACAAAAATCCTTTTTTGAACATAATATTCCTCGCACCCTCTTTTCTTGTTGCTGTGATGAATGTGATGAATTTGATAGCATGAACACCAACGTAATTTTTCTGAAAAAGGATCTATGTTTTAGGTTTTAGATTACAGGTTCTTGGAGAACAATTTGTAGCCAACTACTAAAATTAATTTACAAGGATATTCTAATATCATATATAGACAAATCTTTTATAAGAAAAGATCTATTATCTATCATGGGTTTTTTTAATACAAGAG

Coding sequence (CDS)

ATGGGTCGTGTGATCAGAGCTCAACGTAAGGGTGCGGGATCTGTCTTCCGCTCTCACACTCACCACCGGAAGGGCCCGGCCCGTTTCCGGTCACTCGACTTCGGCGAGCGTAATGGCTACCTGAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGCACCGTTGGCCCGTGTTACCTTCCGCCATCCCTTCCGCTACAAGCACCAGAAGGAACTCTTCATCGCCGCTGAGGGTATGTACACTGGTCAGTTCGTTTACTGCGGGAAAAAGGCTAATCTTGTTGTTGGTAATGTGCTCCCCATTAGAGCCATTCCTGAAGGAGCTGTGGTTTGTAATGTGGAGCACCATGTTGGCGACAGAGGTGTGTTTGCTAGATGCTCTGGTGATTATGCTATTGTTATCAGCCACAACCCAGACAATGATACCAGCAGGATTAAGCTACCATCTGGAGCGAAGAAGATTGTACCCAGTGGATGCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTTAAGGCAGGTAATGCTTACCACAAGTTCCGTGTCAAGCGTAACTGCTGGCCGAAGGTGCGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACATATTGGTCACGCCAGCACTGTCCGCCGTGATGCACCTCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGAGGACAGGCTGCTGCTACTGCTGCCAAGGCTGACAAGGCTTAA

Protein sequence

MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

Homology

[Close]

BLAST of IVF0008827 vs. ExPASy Swiss-Prot
Match: P29766 (60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 1.4e-144
Identity = 243/260 (93.46%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFR+LDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAVVCNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDN T+R+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQA ATAAKADKA
Sbjct: 241 RRTGRLRGQARATAAKADKA 260

[Close]

BLAST of IVF0008827 vs. ExPASy Swiss-Prot
Match: Q42064 (60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2)

HSP 1 Score: 503.1 bits (1294), Expect = 1.9e-141
Identity = 238/258 (92.25%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           V FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA A+KAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of IVF0008827 vs. ExPASy Swiss-Prot
Match: P25998 (60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 5.7e-141
Identity = 238/260 (91.54%), Postives = 252/260 (96.92%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGR+IRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFR+PFRY HQKELF+AAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAVVCNVEH V
Sbjct: 61  VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSG YAIVISHNPDN T+RIKLPSG+KKIVPSGCR MIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA 
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIAG 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0008827 vs. ExPASy Swiss-Prot
Match: P46286 (60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2)

HSP 1 Score: 499.6 bits (1285), Expect = 2.2e-140
Identity = 238/258 (92.25%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA+AAKAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of IVF0008827 vs. ExPASy Swiss-Prot
Match: Q4PSL7 (60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3)

HSP 1 Score: 453.4 bits (1165), Expect = 1.8e-126
Identity = 216/259 (83.40%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKGPA+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH 120
           RV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATAAKAD 259
           ARRTGR RG AA  AAKAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of IVF0008827 vs. ExPASy TrEMBL
Match: A0A1S3BYI5 (60S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.7e-148
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0008827 vs. ExPASy TrEMBL
Match: A0A0A0L7L1 (Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403970 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.2e-148
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0008827 vs. ExPASy TrEMBL
Match: A0A6J1CFM0 (60S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 3.8e-148
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATAAKADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]

BLAST of IVF0008827 vs. ExPASy TrEMBL
Match: A0A6J1J2H3 (60S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.0e-148
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of IVF0008827 vs. ExPASy TrEMBL
Match: A0A6J1FKG6 (60S ribosomal protein L8 OS=Cucurbita moschata OX=3662 GN=LOC111446091 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.0e-148
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 261
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of IVF0008827 vs. NCBI nr
Match: XP_008454581.1 (PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal protein L8 [Benincasa hispida])

HSP 1 Score: 533 bits (1372), Expect = 4.65e-191
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 260
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0008827 vs. NCBI nr
Match: XP_004151970.1 (60S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_011442 [Cucumis sativus])

HSP 1 Score: 532 bits (1371), Expect = 6.60e-191
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 260
           RRTGRLRGQAAATAAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of IVF0008827 vs. NCBI nr
Match: XP_022139448.1 (60S ribosomal protein L8-like [Momordica charantia])

HSP 1 Score: 531 bits (1369), Expect = 1.38e-190
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 259
           RRTGRLRGQAAATAAKADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]

BLAST of IVF0008827 vs. NCBI nr
Match: XP_022940519.1 (60S ribosomal protein L8 [Cucurbita moschata] >XP_022981583.1 60S ribosomal protein L8 [Cucurbita maxima] >XP_023521974.1 60S ribosomal protein L8 [Cucurbita pepo subsp. pepo] >KAG6607833.1 60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531 bits (1368), Expect = 1.89e-190
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKA 260
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of IVF0008827 vs. NCBI nr
Match: KAG7015230.1 (60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 531 bits (1368), Expect = 1.19e-189
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290

Query: 241 RRTGRLRGQAAATAAKADKA 260
           RRTGRLRGQAAATA+KADKA
Sbjct: 291 RRTGRLRGQAAATASKADKA 310

[Close]

BLAST of IVF0008827 vs. TAIR 10
Match: AT4G36130.1 (Ribosomal protein L2 family )

HSP 1 Score: 503.1 bits (1294), Expect = 1.4e-142
Identity = 238/258 (92.25%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           V FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA A+KAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of IVF0008827 vs. TAIR 10
Match: AT2G18020.1 (Ribosomal protein L2 family )

HSP 1 Score: 499.6 bits (1285), Expect = 1.5e-141
Identity = 238/258 (92.25%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA+AAKAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of IVF0008827 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-127
Identity = 216/259 (83.40%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKGPA+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH 120
           RV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATAAKAD 259
           ARRTGR RG AA  AAKAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of IVF0008827 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 103.2 bits (256), Expect = 3.2e-22
Identity = 65/215 (30.23%), Postives = 104/215 (48.37%), Query Frame = 0


Query: 4   VIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDR 123
                   +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG 183
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A +GQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

[Close]

BLAST of IVF0008827 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 103.2 bits (256), Expect = 3.2e-22
Identity = 65/215 (30.23%), Postives = 104/215 (48.37%), Query Frame = 0


Query: 4   VIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDR 123
                   +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG 183
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A +GQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

The following BLAST results are available for this feature:

BLAST of IVF0008827 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29766	1.4e-144	93.46	60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1	[more]
Q42064	1.9e-141	92.25	60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2	[more]
P25998	5.7e-141	91.54	60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1	[more]
P46286	2.2e-140	92.25	60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2	[more]
Q4PSL7	1.8e-126	83.40	60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3	[more]

BLAST of IVF0008827 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BYI5	1.7e-148	100.00	60S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1	[more]
A0A0A0L7L1	2.2e-148	99.62	Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403...	[more]
A0A6J1CFM0	3.8e-148	100.00	60S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=...	[more]
A0A6J1J2H3	5.0e-148	99.23	60S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1	[more]
A0A6J1FKG6	5.0e-148	99.23	60S ribosomal protein L8 OS=Cucurbita moschata OX=3662 GN=LOC111446091 PE=3 SV=1	[more]

BLAST of IVF0008827 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454581.1	4.65e-191	100.00	PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal...	[more]
XP_004151970.1	6.60e-191	99.62	60S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_...	[more]
XP_022139448.1	1.38e-190	100.00	60S ribosomal protein L8-like [Momordica charantia]	[more]
XP_022940519.1	1.89e-190	99.23	60S ribosomal protein L8 [Cucurbita moschata] >XP_022981583.1 60S ribosomal prot...	[more]
KAG7015230.1	1.19e-189	99.23	60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0008827 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36130.1	1.4e-142	92.25	Ribosomal protein L2 family	[more]
AT2G18020.1	1.5e-141	92.25	Ribosomal protein L2 family	[more]
AT3G51190.1	1.3e-127	83.40	Ribosomal protein L2 family	[more]
ATCG00830.1	3.2e-22	30.23	ribosomal protein L2	[more]
ATCG01310.1	3.2e-22	30.23	ribosomal protein L2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 11..90 e-value: 3.2E-34 score: 129.7
IPR002171	Ribosomal protein L2	PIRSF	PIRSF002158	RPL2p_RPL2a_RPL8e_RPL2o	coord: 1..255 e-value: 1.1E-70 score: 235.3
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 1..260
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 96..231 e-value: 4.2E-68 score: 242.2
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 98..224 e-value: 8.7E-45 score: 151.9
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 90..169 e-value: 1.8E-25 score: 90.6
None	No IPR available	GENE3D	2.40.50.140		coord: 1..86 e-value: 8.5E-41 score: 140.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..230
None	No IPR available	PANTHER	PTHR13691:SF48	60S RIBOSOMAL PROTEIN L8	coord: 1..260
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 170..247 e-value: 1.9E-43 score: 148.7
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 13..90 e-value: 5.7E-19 score: 67.9
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 197..208
IPR023672	Ribosomal protein L2, archaeal-type	HAMAP	MF_01320_A	Ribosomal_L2_A	coord: 1..246 score: 35.119415
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 99..246
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008827.2	IVF0008827.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome