IVF0008811 (gene) Melon (IVF77) v1

Overview
NameIVF0008811
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionKinesin-like protein KIN12B
Locationchr11: 19262208 .. 19264400 (-)
RNA-Seq ExpressionIVF0008811
SyntenyIVF0008811
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAATCCCTCCCTTTACATCTTCTCTCAGGTTTCAATTTTCTTCCCCATCCTTCTTCTCTAACGACTAACTCTCTCTCTCTCTACTTTCTCTCCCTCTCTCCCCTTCTCTCTTGCTCTCTTGTCTTCTTAGTCTTCCTCTGAATCTTCACTTTTCCTATCTCTCAATTTCCACTTCTCTAAAATGAAGCGCAGTCAAGAAACCCTATCTTGCGAGTTGGGAGATACTCATCTCACCGATCCACCACCTTCTTCTTCTCCTAGCCCTAACGGCGCCGGAATCAAGGGCGGCAGACCCCCTCGAAAACCCAAGTCGTCTTTCGAAAGAAAATGCTCCACGGTCAGATCCCAACTCCATGGTTCCCGATTCCAAACCCTCGTCGGCTAAGTTGAAGGAGCCCAATTCCGCCTAGGCCTCCCTCTTCTAACCCACTTAAGCGGAAGCTTATTATGGAGACCGTTATTGAGAATTTCATTCCTAGGTTGTTTGATTCTGGTGGGAAGGTACTTTACGTGGTGTGATTACGGGGTTTTGGTTTATTTTTGTCTTAATTTGGGTGGTGGAACGACAGTTCTAGTTTTAGATTCAAGTTTGGAATTTTTGCCTAATGTGAATTCTGTCTGTGATTTTCAGGTGGTAGTGCACTTGAGGTCACTGTTCAAGGACGAAGATGAAGGGGATAATATAATACAGAATTTATCGGTGATCCTTTCTCAATTAATGGGCAGACACTGTTGATGCTGTTGCTGACACAGAGGCAACACATGCTTGATCTCTAATGAAACTCTGTTGTAGTTCTTTGATGACATCGGATGATATGGGAGGGCGAATGTTTACCCGTTGTCTATTCTGTTTGCAGCTTGATATCTTCCAACTTGTAGCAGGCGTTTACTTTTGATGTTGTTGCTGACACAGAGGCAACACAGGCATGATCTCTAGTGAACTCTATTGTAGCTCTTTGATGGACATCGGATGATATGGGAGGGTGAATGTTTAACTTTTGTCTATTATGTTTTCAGCTTGATATCTTCCAGCTTGTAGGAGAGCCTTTTGTTGAAAATTGTATGGCAGGTTTCAACAGTTCTGTATTTGCATATGGGCAAGATCCAATTAATGATAGCTAGAGTAAGATAAATCAAAGTGGACTGCTTTGTCTATTTTCGATGTATTAGTTTGGAGATTAGTCAAGTTTATGATTCTGATTGATTTTCCTGTTGTCCACTTGTCTTGGTATCTCTACGATGTTTTGGATCATAATCTCTCAATATAGAACTTGGATGTATCCATGTTAGCGTGCTATTGGAAGAGTTATATTTGTACTTAAGCATGCTTTAGTTTGGGCTCTCTTTTTTTCCTGCATCTATCTAACTAGTTTCTCTTTTTAGTTATTGTGTCTTGTTTTATTTTGTTTTCAGAGCGATATTCTTTTCTTGGTTTCAGTTTGTGCATATGTTTACATTTTTGTTTGAGTGGGCAACTGGTGCTTAGATAAGGATGAATATTCGTATCAGTATAAACGGCTTCTGGTGATTAGTATTTGCTTCAATGAAAACTGTCCTGAGCTGATTGTCTTTTTTATTCCATTTTATTGATGGAGAATGCCAAAATAGTAGAAACATTGTTTGATTCACTTTCATGCAGTGTTCACAATAAACGTAGGAAATTTATATTAGGTTAGACTACCATTGGGGCAGATCTGAATGCATCACTTACTGCCATTCATGCAATGTTTGGCTCAGAAGTTTTCCACATTTTTATTTTTTTGCTTCTTATTCTCAGGCGACTCAAATACGGAAGATCAAGGGAGTTTTGAGGAAGCATTCATAAAGCAGTTTTAGAATTTAGTCACCCCACTAGTAGTTATTGGTCTTCTGTTTTCCAGCTTTTCTTTTGGCCCTCGTGAACAAGTATTACTTATTGTGGAGGGTAGTTTTCACTATAACCTCTTATTGGCTTCATTGTCATGGTGTTGTTTTTTTAGAAAAAAACTGAAGCATTCTCTTATTTCAATTTACATGTGCATCCCATGTGAAAAGATGACTAAAAATTTCTTACACGTTATAAGGTTTTTTAAACCCTTCATGTCACAAGGTTTATGAATGCTAAGGAAATGTTCTTTATTTATCTTTCGTTTCCATTCCCCCTGCCCCAAAATTTTCTTATTCGAATTTTATGTACTCATTGATCCCTTT

mRNA sequence

ACAAAATCCCTCCCTTTACATCTTCTCTCAGGTTTCAATTTTCTTCCCCATCCTTCTTCTCTAACGACTAACTCTCTCTCTCTCTACTTTCTCTCCCTCTCTCCCCTTCTCTCTTGCTCTCTTGTCTTCTTAGTCTTCCTCTGAATCTTCACTTTTCCTATCTCTCAATTTCCACTTCTCTAAAATGAAGCGCAGTCAAGAAACCCTATCTTGCGAGTTGGGAGATACTCATCTCACCGATCCACCACCTTCTTCTTCTCCTAGCCCTAACGGCGCCGGAATCAAGGGCGGCAGACCCCCTCGAAAACCCAAGTCGTCTTTCGAAAGAAAATGCTCCACGGTCAGATCCCAACTCCATGGTTCCCGATTCCAAACCCTCGTCGGCTAAGTTGAAGGAGCCCAATTCCGCCTAGGCCTCCCTCTTCTAACCCACTTAAGCGGAAGCTTATTATGGAGACCGTTATTGAGAATTTCATTCCTAGGTTGTTTGATTCTGGTGGGAAGGTGGTAGTGCACTTGAGGTCACTGTTCAAGGACGAAGATGAAGGGGATAATATAATACAGAATTTATCGGTGATCCTTTCTCAATTAATGGGCAGACACTGTTGATGCTGTTGCTGACACAGAGGCAACACATGCTTGATCTCTAATGAAACTCTGTTGTAGTTCTTTGATGACATCGGATGATATGGGAGGGCGAATGTTTACCCGTTGTCTATTCTGTTTGCAGCTTGATATCTTCCAACTTGTAGCAGGCGTTTACTTTTGATGTTGTTGCTGACACAGAGGCAACACAGCTTGATATCTTCCAGCTTGTAGGAGAGCCTTTTGTTGAAAATTGTATGGCAGGTTTCAACAGTTCTGTATTTGCATATGGGCAAGATCCAATTAATGATAGCTAGAGCGACTCAAATACGGAAGATCAAGGGAGTTTTGAGGAAGCATTCATAAAGCAGTTTTAGAATTTAGTCACCCCACTAGTAGTTATTGGTCTTCTGTTTTCCAGCTTTTCTTTTGGCCCTCGTGAACAAGTATTACTTATTGTGGAGGGTAGTTTTCACTATAACCTCTTATTGGCTTCATTGTCATGGTGTTGTTTTTTTAGAAAAAAACTGAAGCATTCTCTTATTTCAATTTACATGTGCATCCCATGTGAAAAGATGACTAAAAATTTCTTACACGTTATAAGGTTTTTTAAACCCTTCATGTCACAAGGTTTATGAATGCTAAGGAAATGTTCTTTATTTATCTTTCGTTTCCATTCCCCCTGCCCCAAAATTTTCTTATTCGAATTTTATGTACTCATTGATCCCTTT

Coding sequence (CDS)

ATGAAGCGCAGTCAAGAAACCCTATCTTGCGAGTTGGGAGATACTCATCTCACCGATCCACCACCTTCTTCTTCTCCTAGCCCTAACGGCGCCGGAATCAAGGGCGGCAGACCCCCTCGAAAACCCAAGTCGTCTTTCGAAAGAAAATGCTCCACGGTCAGATCCCAACTCCATGGTTCCCGATTCCAAACCCTCGTCGGCTAA

Protein sequence

MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSSFERKCSTVRSQLHGSRFQTLVG
Homology
[Close]
BLAST of IVF0008811 vs. ExPASy TrEMBL
Match: A0A5D3CU25 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00020 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.4e-16
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]
BLAST of IVF0008811 vs. ExPASy TrEMBL
Match: A0A5A7UMR4 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002720 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSSFERKCSTV 54
          MKR+QETLSCEL DT+L DP PSSSPSPN  GIKGGRP +KPKSSFERKCSTV
Sbjct: 1  MKRTQETLSCELRDTYLADPLPSSSPSPNSIGIKGGRPFQKPKSSFERKCSTV 53

[Close]
BLAST of IVF0008811 vs. ExPASy TrEMBL
Match: A0A5A7VH00 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold70G00190 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]
BLAST of IVF0008811 vs. ExPASy TrEMBL
Match: A0A5D3DJ90 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00200 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]
BLAST of IVF0008811 vs. ExPASy TrEMBL
Match: A0A1S3AXT5 (kinesin-like protein KIN12B OS=Cucumis melo OX=3656 GN=LOC103483961 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 46
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]
BLAST of IVF0008811 vs. NCBI nr
Match: KAA0061886.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa] >TYK15371.1 kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 7.51e-23
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 45
          MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]
BLAST of IVF0008811 vs. NCBI nr
Match: KAA0056388.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa] >TYK29130.1 kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 2.13e-21
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSSFERKCSTV 53
          MKR+QETLSCEL DT+L DP PSSSPSPN  GIKGGRP +KPKSSFERKCSTV
Sbjct: 1  MKRTQETLSCELRDTYLADPLPSSSPSPNSIGIKGGRPFQKPKSSFERKCSTV 53

[Close]
BLAST of IVF0008811 vs. NCBI nr
Match: XP_008439062.1 (PREDICTED: kinesin-like protein KIN12B [Cucumis melo])

HSP 1 Score: 65.1 bits (157), Expect = 3.25e-10
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 45
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]
BLAST of IVF0008811 vs. NCBI nr
Match: TYK23655.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 3.25e-10
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 45
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

[Close]
BLAST of IVF0008811 vs. NCBI nr
Match: KAA0067652.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 3.25e-10
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 1  MKRSQETLSCELGDTHLTDPPPSSSPSPNGAGIKGGRPPRKPKSS 45
          MK   +  +  L DTHL D PPSSSPSPNGAGIKGGRPPRKPKSS
Sbjct: 1  MKHFMQPRNPILRDTHLADQPPSSSPSPNGAGIKGGRPPRKPKSS 45

The following BLAST results are available for this feature:
BLAST of IVF0008811 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0008811 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CU254.4e-16100.00Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7UMR41.9e-1483.02Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7VH002.2e-0773.33Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3DJ902.2e-0773.33Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3AXT52.2e-0773.33kinesin-like protein KIN12B OS=Cucumis melo OX=3656 GN=LOC103483961 PE=3 SV=1[more]
BLAST of IVF0008811 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061886.17.51e-23100.00kinesin-like protein KIN12B [Cucumis melo var. makuwa] >TYK15371.1 kinesin-like ... [more]
KAA0056388.12.13e-2183.02kinesin-like protein KIN12B [Cucumis melo var. makuwa] >TYK29130.1 kinesin-like ... [more]
XP_008439062.13.25e-1073.33PREDICTED: kinesin-like protein KIN12B [Cucumis melo][more]
TYK23655.13.25e-1073.33kinesin-like protein KIN12B [Cucumis melo var. makuwa][more]
KAA0067652.13.25e-1073.33kinesin-like protein KIN12B [Cucumis melo var. makuwa][more]
BLAST of IVF0008811 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008811.2IVF0008811.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
cellular_component GO:0005871 kinesin complex
cellular_component GO:0005874 microtubule
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008574 plus-end-directed microtubule motor activity