IVF0008800 (gene) Melon (IVF77) v1

Overview
NameIVF0008800
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 18522369 .. 18522542 (+)
RNA-Seq ExpressionIVF0008800
SyntenyIVF0008800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACAGCTCTGCCTCCGCCTCTTCAAGATGAAGATGGTGCAATTCCGCCTATTTAGAATGACGACAAAACAGAGTAGAGATGCTCGATCATTCCTACTAGAAGTTGAATCATACGATAAAAGCCCGATCTTCCCTAGTAGAAATCAGATCATTGACGGTAAAATAGAATGA

mRNA sequence

ATGGTACAGCTCTGCCTCCGCCTCTTCAAGATGAAGATGGTGCAATTCCGCCTATTTAGAATGACGACAAAACAGAGTAGAGATGCTCGATCATTCCTACTAGAAGTTGAATCATACGATAAAAGCCCGATCTTCCCTAGTAGAAATCAGATCATTGACGGTAAAATAGAATGA

Coding sequence (CDS)

ATGGTACAGCTCTGCCTCCGCCTCTTCAAGATGAAGATGGTGCAATTCCGCCTATTTAGAATGACGACAAAACAGAGTAGAGATGCTCGATCATTCCTACTAGAAGTTGAATCATACGATAAAAGCCCGATCTTCCCTAGTAGAAATCAGATCATTGACGGTAAAATAGAATGA

Protein sequence

MVQLCLRLFKMKMVQFRLFRMTTKQSRDARSFLLEVESYDKSPIFPSRNQIIDGKIE
Homology
BLAST of IVF0008800 vs. ExPASy TrEMBL
Match: A0A5D3CXY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002070 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-21
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0

Query: 1   MVQLCLRLFKMKMVQFRLFRMTTKQSRDARSFLLEVESYDKSPIFPSRNQIIDGKIE 58
           MVQLCLRLFKMKMVQFRLFRMTTKQSRDARSFLLEVESYDKSPIFPSRNQIIDGKIE
Sbjct: 100 MVQLCLRLFKMKMVQFRLFRMTTKQSRDARSFLLEVESYDKSPIFPSRNQIIDGKIE 156

BLAST of IVF0008800 vs. NCBI nr
Match: TYK16412.1 (uncharacterized protein E5676_scaffold21G002070 [Cucumis melo var. makuwa])

HSP 1 Score: 110 bits (274), Expect = 5.76e-29
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0

Query: 1   MVQLCLRLFKMKMVQFRLFRMTTKQSRDARSFLLEVESYDKSPIFPSRNQIIDGKIE 57
           MVQLCLRLFKMKMVQFRLFRMTTKQSRDARSFLLEVESYDKSPIFPSRNQIIDGKIE
Sbjct: 100 MVQLCLRLFKMKMVQFRLFRMTTKQSRDARSFLLEVESYDKSPIFPSRNQIIDGKIE 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CXY41.7e-21100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK16412.15.76e-29100.00uncharacterized protein E5676_scaffold21G002070 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008800.1IVF0008800.1mRNA