IVF0008747 (gene) Melon (IVF77) v1

Overview
NameIVF0008747
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 19757593 .. 19757858 (-)
RNA-Seq ExpressionIVF0008747
SyntenyIVF0008747
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGGATTGATATTAGTCTTGATACAGCAAAATAATTCTATTAGATCTAATGTACTAATAAGTACATTAGATCTTCCCTTTACTTGTAGGAGTACATCTTGGATCTGCCGATTATGTTATGGACGAAGTCCTACTCACGGGGACCTGGTCGAATTGGGATGGACGAAGTCCTACTCACGGGGACCTGGTCGAATTGGGATGGACGAAGTCCTACTCACGGGGACCTGGTCGAATTGGGAGAAGCCCTAGGGAAGAAGATTGA

mRNA sequence

ATGGGAGTACATCTTGGATCTGCCGATTATGTTATGGACGAAGTCCTACTCACGGGGACCTGGTCGAATTGGGATGGACGAAGTCCTACTCACGGGGACCTGGTCGAATTGGGATGGACGAAGTCCTACTCACGGGGACCTGGTCGAATTGGGAGAAGCCCTAGGGAAGAAGATTGA

Coding sequence (CDS)

ATGGGAGTACATCTTGGATCTGCCGATTATGTTATGGACGAAGTCCTACTCACGGGGACCTGGTCGAATTGGGATGGACGAAGTCCTACTCACGGGGACCTGGTCGAATTGGGATGGACGAAGTCCTACTCACGGGGACCTGGTCGAATTGGGAGAAGCCCTAGGGAAGAAGATTGA

Protein sequence

MGVHLGSADYVMDEVLLTGTWSNWDGRSPTHGDLVELGWTKSYSRGPGRIGRSPREED
Homology
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BLAST of IVF0008747 vs. NCBI nr
Match: KAG6570305.1 (DNA-directed RNA polymerase subunit beta', partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 54.3 bits (129), Expect = 2.50e-07
Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 0 

Query: 2   GVHLGSADYVMDEVLLTGTWSNWD 25
           GVHLGSADYVMDEVLLTGTWSNW+
Sbjct: 105 GVHLGSADYVMDEVLLTGTWSNWE 128

The following BLAST results are available for this feature:
BLAST of IVF0008747 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0008747 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0008747 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570305.12.50e-0795.83DNA-directed RNA polymerase subunit beta', partial [Cucurbita argyrosperma subsp... [more]
BLAST of IVF0008747 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008747.1IVF0008747.1mRNA